RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 VWA3AA6NCI4 1184 aa12.25□□□□□ -0.45
CHD3-208ENST00000470531 BANK1Q8NDB2 785 aa12.25□□□□□ -0.45
CHD3-208ENST00000470531 NACAP1Q9BZK3 213 aa12.25□□□□□ -0.45
CHD3-208ENST00000470531 VPS18Q9P253 973 aa12.25□□□□□ -0.45
CHD3-208ENST00000470531 KCNH3Q9ULD8 1083 aa12.25□□□□□ -0.45
CHD3-208ENST00000470531 AOX1Q06278 1338 aa12.25□□□□□ -0.45
CHD3-208ENST00000470531 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
CHD3-208ENST00000470531 CDKL5O76039 1030 aa12.25□□□□□ -0.45
CHD3-208ENST00000470531 SCARF1Q14162 830 aa12.25□□□□□ -0.45
CHD3-208ENST00000470531 FAM107BQ9H098 131 aa12.25□□□□□ -0.45
CHD3-208ENST00000470531 MAST3O60307 1309 aa12.25□□□□□ -0.45
CHD3-208ENST00000470531 ZSCAN12O43309 604 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 USP5P45974 858 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 IRX5P78411 483 aaPredicted RBP12.24□□□□□ -0.45
CHD3-208ENST00000470531 NR5A1Q13285 461 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 DNAJC10Q8IXB1 793 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 PCDHA5Q9Y5H7 936 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 CDC42BPGQ6DT37 1551 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 ANKRD18BA2A2Z9 1011 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 KIF5CO60282 957 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 ZMYND10O75800 440 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 MYL5Q02045 173 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 LEKR1Q6ZMV7 388 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 DIS3L2Q8IYB7 885 aaKnown RBP12.24□□□□□ -0.45
CHD3-208ENST00000470531 BAG1Q99933 345 aaPredicted RBP12.24□□□□□ -0.45
CHD3-208ENST00000470531 VPS54Q9P1Q0 977 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 AKAP2Q9Y2D5 859 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 XBP1P17861 261 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 MCM7P33993 719 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 RNASE9P60153 205 aaKnown RBP12.24□□□□□ -0.45
CHD3-208ENST00000470531 KIAA1328Q86T90 577 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 TDRD7Q8NHU6 1098 aaKnown RBP12.24□□□□□ -0.45
CHD3-208ENST00000470531 SDR42E1Q8WUS8 393 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 KAZALD1Q96I82 304 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 SERTAD1Q9UHV2 236 aa12.24□□□□□ -0.45
CHD3-208ENST00000470531 RBM6P78332 1123 aaKnown RBP12.23□□□□□ -0.45
CHD3-208ENST00000470531 WTAPQ15007 396 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 PTPROQ16827 1216 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 RRAGBQ5VZM2 374 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 DPF2Q92785 391 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 PRKAB2O43741 272 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 NEMFO60524 1076 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 ZPR1O75312 459 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 ITGA6P23229 1130 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 GABPB1Q06547 395 aaPredicted RBP12.23□□□□□ -0.45
CHD3-208ENST00000470531 CCDC150Q8NCX0 1101 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 ERO1AQ96HE7 468 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 ARFGAP3Q9NP61 516 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 GTF2A1P52655 376 aaPredicted RBP12.23□□□□□ -0.45
CHD3-208ENST00000470531 NLRP5P59047 1200 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 PPP1R13BQ96KQ4 1090 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 DEF6Q9H4E7 631 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 RSPH14Q9UHP6 348 aa12.23□□□□□ -0.45
CHD3-208ENST00000470531 ALKQ9UM73 1620 aa12.22□□□□□ -0.45
CHD3-208ENST00000470531 RIMS1Q86UR5 1692 aaKnown RBP12.22□□□□□ -0.45
CHD3-208ENST00000470531 PFKFB2O60825 505 aa12.22□□□□□ -0.45
CHD3-208ENST00000470531 CYP7A1P22680 504 aa12.22□□□□□ -0.45
CHD3-208ENST00000470531 MAP3K12Q12852 859 aa12.22□□□□□ -0.45
CHD3-208ENST00000470531 RTN1Q16799 776 aa12.22□□□□□ -0.45
CHD3-208ENST00000470531 ZCRB1Q8TBF4 217 aaKnown RBP12.22□□□□□ -0.45
CHD3-208ENST00000470531 SENP2Q9HC62 589 aa12.22□□□□□ -0.45
CHD3-208ENST00000470531 BRMS1Q9HCU9 246 aa12.22□□□□□ -0.45
CHD3-208ENST00000470531 MORC2Q9Y6X9 1032 aaPredicted RBP12.22□□□□□ -0.45
CHD3-208ENST00000470531 ZNF532Q9HCE3 1301 aa12.22□□□□□ -0.45
CHD3-208ENST00000470531 KRBA2Q6ZNG9 492 aa12.22□□□□□ -0.45
CHD3-208ENST00000470531 HAUS7Q99871 368 aa12.22□□□□□ -0.45
CHD3-208ENST00000470531 STX8Q9UNK0 236 aa12.22□□□□□ -0.45
CHD3-208ENST00000470531 ARID5AQ03989 594 aa12.22□□□□□ -0.45
CHD3-208ENST00000470531 PPP2R3AQ06190 1150 aa12.22□□□□□ -0.45
CHD3-208ENST00000470531 NOM1Q5C9Z4 860 aaKnown RBP12.22□□□□□ -0.45
CHD3-208ENST00000470531 TBX22Q9Y458 520 aa12.22□□□□□ -0.45
CHD3-208ENST00000470531 V9GY48 417 aaPredicted RBP12.22□□□□□ -0.45
CHD3-208ENST00000470531 BAZ2BQ9UIF8 2168 aaKnown RBP12.22□□□□□ -0.45
CHD3-208ENST00000470531 KDRP35968 1356 aa12.21□□□□□ -0.45
CHD3-208ENST00000470531 IDEP14735 1019 aa12.21□□□□□ -0.45
CHD3-208ENST00000470531 FBXO18Q8NFZ0 1043 aa12.21□□□□□ -0.45
CHD3-208ENST00000470531 JADE2Q9NQC1 790 aa12.21□□□□□ -0.45
CHD3-208ENST00000470531 SAMSN1Q9NSI8 373 aaKnown RBP12.21□□□□□ -0.45
CHD3-208ENST00000470531 TSPOAP1O95153 1857 aa12.21□□□□□ -0.45
CHD3-208ENST00000470531 HECW2Q9P2P5 1572 aa12.21□□□□□ -0.45
CHD3-208ENST00000470531 ARAP3Q8WWN8 1544 aa12.21□□□□□ -0.45
CHD3-208ENST00000470531 CYP2D7A0A087X1C5 515 aa12.21□□□□□ -0.45
CHD3-208ENST00000470531 IRS4O14654 1257 aaPredicted RBP12.21□□□□□ -0.45
CHD3-208ENST00000470531 PHKA1P46020 1223 aa12.21□□□□□ -0.45
CHD3-208ENST00000470531 ADALQ6DHV7 355 aa12.21□□□□□ -0.45
CHD3-208ENST00000470531 ZNF446Q9NWS9 450 aa12.21□□□□□ -0.45
CHD3-208ENST00000470531 ANGEL1Q9UNK9 670 aaKnown RBP12.21□□□□□ -0.45
CHD3-208ENST00000470531 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.21□□□□□ -0.451e-6■■■□□ 17.1
CHD3-208ENST00000470531 CARMIL3Q8ND23 1372 aa12.21□□□□□ -0.46
CHD3-208ENST00000470531 STARD3NLO95772 234 aa12.21□□□□□ -0.46
CHD3-208ENST00000470531 CAPN2P17655 700 aa12.21□□□□□ -0.46
CHD3-208ENST00000470531 SMIM5Q71RC9 77 aa12.21□□□□□ -0.46
CHD3-208ENST00000470531 CCDC191Q8NCU4 936 aa12.21□□□□□ -0.46
CHD3-208ENST00000470531 KIF28PB7ZC32 967 aa12.2□□□□□ -0.46
CHD3-208ENST00000470531 ENC1O14682 589 aa12.2□□□□□ -0.46
CHD3-208ENST00000470531 LINC00301Q8NCQ3 95 aa12.2□□□□□ -0.46
CHD3-208ENST00000470531 SLF1Q9BQI6 1058 aa12.2□□□□□ -0.46
CHD3-208ENST00000470531 MAGEC2Q9UBF1 373 aaPredicted RBP12.2□□□□□ -0.46
CHD3-208ENST00000470531 MTF1Q14872 753 aa12.2□□□□□ -0.46
CHD3-208ENST00000470531 IGSF22Q8N9C0 903 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms