RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 ECM29Q5VYK3 1845 aa24.57■■□□□ 1.52
NUP43-205ENST00000463048 CHGBP05060 677 aa24.57■■□□□ 1.52
NUP43-205ENST00000463048 SLC9C2Q5TAH2 1124 aa24.57■■□□□ 1.52
NUP43-205ENST00000463048 PRAMEF18Q5VWM3 479 aa24.57■■□□□ 1.52
NUP43-205ENST00000463048 ERICH6BQ5W0A0 696 aa24.57■■□□□ 1.52
NUP43-205ENST00000463048 USP40Q9NVE5 1235 aa24.57■■□□□ 1.52
NUP43-205ENST00000463048 PDE6AP16499 860 aa24.56■■□□□ 1.52
NUP43-205ENST00000463048 FSTL1Q12841 308 aa24.56■■□□□ 1.52
NUP43-205ENST00000463048 SPDYE2Q495Y8 402 aa24.56■■□□□ 1.52
NUP43-205ENST00000463048 CDC42EP5Q6NZY7 148 aa24.56■■□□□ 1.52
NUP43-205ENST00000463048 CDC37L1Q7L3B6 337 aa24.56■■□□□ 1.52
NUP43-205ENST00000463048 MIGA1Q8NAN2 632 aa24.56■■□□□ 1.52
NUP43-205ENST00000463048 NOL10Q9BSC4 688 aaKnown RBP24.56■■□□□ 1.52
NUP43-205ENST00000463048 ZNF408Q9H9D4 720 aa24.56■■□□□ 1.52
NUP43-205ENST00000463048 AATFQ9NY61 560 aaKnown RBP eCLIP24.56■■□□□ 1.52
NUP43-205ENST00000463048 GAKO14976 1311 aa24.56■■□□□ 1.52
NUP43-205ENST00000463048 ITGBL1O95965 494 aaPredicted RBP24.55■■□□□ 1.52
NUP43-205ENST00000463048 TMOD2Q9NZR1 351 aa24.55■■□□□ 1.52
NUP43-205ENST00000463048 ZNF532Q9HCE3 1301 aa24.55■■□□□ 1.52
NUP43-205ENST00000463048 TRIM6-TRIM34B2RNG4 842 aa24.54■■□□□ 1.52
NUP43-205ENST00000463048 C1QTNF8P60827 252 aa24.54■■□□□ 1.52
NUP43-205ENST00000463048 DYNLL1P63167 89 aaKnown RBP24.54■■□□□ 1.52
NUP43-205ENST00000463048 APOBEC3FQ8IUX4 373 aaKnown RBP24.54■■□□□ 1.52
NUP43-205ENST00000463048 FSD1Q9BTV5 496 aa24.54■■□□□ 1.52
NUP43-205ENST00000463048 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.54■■□□□ 1.529e-8■■□□□ 14.4
NUP43-205ENST00000463048 KBTBD3Q8NAB2 608 aa24.53■■□□□ 1.52
NUP43-205ENST00000463048 RILPL2Q969X0 211 aa24.53■■□□□ 1.52
NUP43-205ENST00000463048 FAM163AQ96GL9 167 aaPredicted RBP24.53■■□□□ 1.52
NUP43-205ENST00000463048 PITPNM2Q9BZ72 1349 aa24.53■■□□□ 1.52
NUP43-205ENST00000463048 GPR75-ASB3A0A0A6YYF3 556 aa24.52■■□□□ 1.52
NUP43-205ENST00000463048 TCP10Q12799 353 aa24.52■■□□□ 1.52
NUP43-205ENST00000463048 SH3RF3Q8TEJ3 882 aaPredicted RBP24.52■■□□□ 1.52
NUP43-205ENST00000463048 NFIAQ12857 509 aa24.51■■□□□ 1.51
NUP43-205ENST00000463048 PICALMQ13492 652 aa24.51■■□□□ 1.51
NUP43-205ENST00000463048 DEFB129Q9H1M3 183 aa24.51■■□□□ 1.51
NUP43-205ENST00000463048 MYH7P12883 1935 aa24.51■■□□□ 1.51
NUP43-205ENST00000463048 BAG3O95817 575 aa24.5■■□□□ 1.51
NUP43-205ENST00000463048 ADD2P35612 726 aa24.5■■□□□ 1.51
NUP43-205ENST00000463048 RGS3P49796 1198 aa24.5■■□□□ 1.51
NUP43-205ENST00000463048 RASA3Q14644 834 aa24.5■■□□□ 1.51
NUP43-205ENST00000463048 CDCA5Q96FF9 252 aa24.5■■□□□ 1.51
NUP43-205ENST00000463048 OSBPL3Q9H4L5 887 aa24.5■■□□□ 1.51
NUP43-205ENST00000463048 TCRBV5S4A2TA0A5A2 114 aa24.49■■□□□ 1.51
NUP43-205ENST00000463048 ZSCAN25Q6NSZ9 544 aa24.49■■□□□ 1.51
NUP43-205ENST00000463048 TEX11Q8IYF3 940 aa24.49■■□□□ 1.51
NUP43-205ENST00000463048 TMEM39BQ9GZU3 492 aa24.49■■□□□ 1.51
NUP43-205ENST00000463048 MAGEB6P1A0A0J9YX57 407 aa24.48■■□□□ 1.51
NUP43-205ENST00000463048 CELF2O95319 508 aaKnown RBP24.48■■□□□ 1.51
NUP43-205ENST00000463048 TNNI2P48788 182 aa24.48■■□□□ 1.51
NUP43-205ENST00000463048 RHBDL3P58872 404 aa24.48■■□□□ 1.51
NUP43-205ENST00000463048 CNTNAP1P78357 1384 aa24.48■■□□□ 1.51
NUP43-205ENST00000463048 TNFAIP1Q13829 316 aa24.48■■□□□ 1.51
NUP43-205ENST00000463048 CDAN1Q8IWY9 1227 aa24.48■■□□□ 1.51
NUP43-205ENST00000463048 EVI5LQ96CN4 794 aa24.48■■□□□ 1.51
NUP43-205ENST00000463048 PASKQ96RG2 1323 aa24.48■■□□□ 1.51
NUP43-205ENST00000463048 RNF113AO15541 343 aaKnown RBP24.47■■□□□ 1.51
NUP43-205ENST00000463048 PRKG1Q13976 671 aa24.47■■□□□ 1.51
NUP43-205ENST00000463048 TTC22Q5TAA0 569 aa24.47■■□□□ 1.51
NUP43-205ENST00000463048 ZFPM1Q8IX07 1006 aa24.47■■□□□ 1.51
NUP43-205ENST00000463048 FAM198AQ9UFP1 575 aa24.47■■□□□ 1.51
NUP43-205ENST00000463048 WDHD1O75717 1129 aaPredicted RBP24.46■■□□□ 1.51
NUP43-205ENST00000463048 ARMT1Q9H993 441 aa24.46■■□□□ 1.51
NUP43-205ENST00000463048 DDX4Q9NQI0 724 aaKnown RBP24.46■■□□□ 1.51
NUP43-205ENST00000463048 IGSF3O75054 1194 aa24.45■■□□□ 1.5
NUP43-205ENST00000463048 MBD4O95243 580 aa24.45■■□□□ 1.5
NUP43-205ENST00000463048 GSPT1P15170 499 aaKnown RBP24.45■■□□□ 1.5
NUP43-205ENST00000463048 PPP4CP60510 307 aa24.45■■□□□ 1.5
NUP43-205ENST00000463048 HTRA3P83110 453 aa24.45■■□□□ 1.5
NUP43-205ENST00000463048 UBE3CQ15386 1083 aa24.45■■□□□ 1.5
NUP43-205ENST00000463048 NBPF12Q5TAG4 269 aaPredicted RBP24.45■■□□□ 1.5
NUP43-205ENST00000463048 LCORLQ8N3X6 602 aa24.45■■□□□ 1.5
NUP43-205ENST00000463048 TGFBRAP1Q8WUH2 860 aa24.45■■□□□ 1.5
NUP43-205ENST00000463048 FZD1Q9UP38 647 aa24.45■■□□□ 1.5
NUP43-205ENST00000463048 PLCG2P16885 1265 aa24.44■■□□□ 1.5
NUP43-205ENST00000463048 CST9Q5W186 159 aa24.44■■□□□ 1.5
NUP43-205ENST00000463048 MAPKAPK5Q8IW41 473 aa24.44■■□□□ 1.5
NUP43-205ENST00000463048 PUS7LQ9H0K6 701 aaKnown RBP24.44■■□□□ 1.5
NUP43-205ENST00000463048 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.44■■□□□ 1.5
NUP43-205ENST00000463048 AK9Q5TCS8 1911 aa24.43■■□□□ 1.5
NUP43-205ENST00000463048 TRPM7Q96QT4 1865 aa24.43■■□□□ 1.5
NUP43-205ENST00000463048 APLP1P51693 650 aa24.43■■□□□ 1.5
NUP43-205ENST00000463048 TTLL12Q14166 644 aaPredicted RBP24.43■■□□□ 1.5
NUP43-205ENST00000463048 SLC4A8Q2Y0W8 1093 aa24.43■■□□□ 1.5
NUP43-205ENST00000463048 ZSCAN29Q8IWY8 852 aaPredicted RBP24.43■■□□□ 1.5
NUP43-205ENST00000463048 SEC62Q99442 399 aaKnown RBP24.43■■□□□ 1.5
NUP43-205ENST00000463048 RIOK1Q9BRS2 568 aaKnown RBP24.43■■□□□ 1.5
NUP43-205ENST00000463048 M0R2C6 588 aa24.42■■□□□ 1.5
NUP43-205ENST00000463048 ZFYP08048 801 aaPredicted RBP24.42■■□□□ 1.5
NUP43-205ENST00000463048 USP5P45974 858 aa24.42■■□□□ 1.5
NUP43-205ENST00000463048 LRRFIP1Q32MZ4 808 aaKnown RBP24.42■■□□□ 1.5
NUP43-205ENST00000463048 FKBP1CQ5VVH2 108 aa24.42■■□□□ 1.5
NUP43-205ENST00000463048 MOB2Q70IA6 237 aa24.42■■□□□ 1.5
NUP43-205ENST00000463048 FAM83AQ86UY5 434 aa24.42■■□□□ 1.5
NUP43-205ENST00000463048 FAM151AQ8WW52 585 aa24.42■■□□□ 1.5
NUP43-205ENST00000463048 APPBP2Q92624 585 aa24.42■■□□□ 1.5
NUP43-205ENST00000463048 OSBP2Q969R2 916 aa24.42■■□□□ 1.5
NUP43-205ENST00000463048 AIDAQ96BJ3 306 aa24.42■■□□□ 1.5
NUP43-205ENST00000463048 IDI2Q9BXS1 227 aa24.42■■□□□ 1.5
NUP43-205ENST00000463048 SAP30BPQ9UHR5 308 aaKnown RBP24.42■■□□□ 1.5
NUP43-205ENST00000463048 PPP2R3BQ9Y5P8 575 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms