RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 BICC1Q9H694 974 aaKnown RBP13.56□□□□□ -0.24
SEC16A-207ENST00000453963 DTHD1Q6ZMT9 781 aa13.56□□□□□ -0.24
SEC16A-207ENST00000453963 BTG4Q9NY30 223 aa13.56□□□□□ -0.24
SEC16A-207ENST00000453963 EIF4G3O43432 1585 aaKnown RBP13.56□□□□□ -0.24
SEC16A-207ENST00000453963 ZNF202O95125 648 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 TSPY3P0CV98 308 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 TSPY8P0CW00 308 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 KRT79Q5XKE5 535 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 HEATR3Q7Z4Q2 680 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 PPM1EQ8WY54 764 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 TMEM87BQ96K49 555 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 ORAI2Q96SN7 254 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 C6orf50Q9HD87 102 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 CDC37L1Q7L3B6 337 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 TRMT1LQ7Z2T5 733 aaKnown RBP13.55□□□□□ -0.24
SEC16A-207ENST00000453963 OGFOD1Q8N543 542 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 ZC3H12CQ9C0D7 883 aaKnown RBP13.55□□□□□ -0.24
SEC16A-207ENST00000453963 SAMD15Q9P1V8 674 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 MKRN1Q9UHC7 482 aaKnown RBP13.55□□□□□ -0.24
SEC16A-207ENST00000453963 SPATA31E1Q6ZUB1 1445 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 NDUFAB1O14561 156 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 IL13P35225 146 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 SELENOSQ9BQE4 189 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 MTRF1LQ9UGC7 380 aaKnown RBP13.55□□□□□ -0.24
SEC16A-207ENST00000453963 ATP10AO60312 1499 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 DISP1Q96F81 1524 aa13.55□□□□□ -0.24
SEC16A-207ENST00000453963 IBTKQ9P2D0 1353 aaPredicted RBP13.54□□□□□ -0.24
SEC16A-207ENST00000453963 KRT13P13646 458 aa13.54□□□□□ -0.24
SEC16A-207ENST00000453963 GSPT1P15170 499 aaKnown RBP13.54□□□□□ -0.24
SEC16A-207ENST00000453963 OAS2P29728 719 aaKnown RBP13.54□□□□□ -0.24
SEC16A-207ENST00000453963 NAPAP54920 295 aa13.54□□□□□ -0.24
SEC16A-207ENST00000453963 GPR161Q8N6U8 529 aaKnown RBP13.54□□□□□ -0.24
SEC16A-207ENST00000453963 NSFL1CQ9UNZ2 370 aaKnown RBP13.54□□□□□ -0.24
SEC16A-207ENST00000453963 SBNO2Q9Y2G9 1366 aa13.54□□□□□ -0.24
SEC16A-207ENST00000453963 ABCC4O15439 1325 aa13.54□□□□□ -0.24
SEC16A-207ENST00000453963 GOLGA6CA6NDK9 693 aa13.54□□□□□ -0.24
SEC16A-207ENST00000453963 GOLGA6DP0CG33 693 aa13.54□□□□□ -0.24
SEC16A-207ENST00000453963 HELBQ8NG08 1087 aaPredicted RBP13.54□□□□□ -0.24
SEC16A-207ENST00000453963 CEP63Q96MT8 703 aa13.54□□□□□ -0.24
SEC16A-207ENST00000453963 GOLGA6AQ9NYA3 693 aa13.54□□□□□ -0.24
SEC16A-207ENST00000453963 INPP5BP32019 993 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 CCT6AP40227 531 aaKnown RBP13.53□□□□□ -0.24
SEC16A-207ENST00000453963 TBC1D8BQ0IIM8 1120 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 RSRC1Q96IZ7 334 aaKnown RBP13.53□□□□□ -0.24
SEC16A-207ENST00000453963 RBM28Q9NW13 759 aaKnown RBP13.53□□□□□ -0.24
SEC16A-207ENST00000453963 DNMT1P26358 1616 aaKnown RBP13.53□□□□□ -0.24
SEC16A-207ENST00000453963 TRMT2AQ8IZ69 625 aaKnown RBP13.53□□□□□ -0.24
SEC16A-207ENST00000453963 GPT2Q8TD30 523 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 TFCP2L1Q9NZI6 479 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 ATP2A1O14983 1001 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 ARID5AQ03989 594 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 BRD3Q15059 726 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 ZNF790Q6PG37 636 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 ZNF804AQ7Z570 1209 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 MPHOSPH6Q99547 160 aaKnown RBP13.53□□□□□ -0.24
SEC16A-207ENST00000453963 NFE2L3Q9Y4A8 694 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 LMTK3Q96Q04 1460 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 SBNO1A3KN83 1393 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 F8W031 263 aaPredicted RBP13.53□□□□□ -0.24
SEC16A-207ENST00000453963 DEXIO95424 95 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 FMNL3Q8IVF7 1028 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 MRFAP1L1Q96HT8 127 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 FAM227BQ96M60 508 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 HDAC9Q9UKV0 1011 aa13.53□□□□□ -0.24
SEC16A-207ENST00000453963 EDC4Q6P2E9 1401 aaKnown RBP13.53□□□□□ -0.24
SEC16A-207ENST00000453963 PNMA6EA0A0J9YXQ4 647 aa13.52□□□□□ -0.24
SEC16A-207ENST00000453963 A0A1B0GUA9 196 aa13.52□□□□□ -0.24
SEC16A-207ENST00000453963 MCM7P33993 719 aa13.52□□□□□ -0.24
SEC16A-207ENST00000453963 C8orf74Q6P047 294 aa13.52□□□□□ -0.24
SEC16A-207ENST00000453963 CCDC26Q8TAB7 109 aa13.52□□□□□ -0.24
SEC16A-207ENST00000453963 CDCA7Q9BWT1 371 aaPredicted RBP13.52□□□□□ -0.24
SEC16A-207ENST00000453963 IQCGQ9H095 443 aaKnown RBP13.52□□□□□ -0.24
SEC16A-207ENST00000453963 TNNI3KQ59H18 835 aa13.52□□□□□ -0.24
SEC16A-207ENST00000453963 PPP1R14CQ8TAE6 165 aa13.52□□□□□ -0.24
SEC16A-207ENST00000453963 TSC1Q92574 1164 aa13.52□□□□□ -0.24
SEC16A-207ENST00000453963 NUP58Q9BVL2 599 aa13.52□□□□□ -0.24
SEC16A-207ENST00000453963 ANGEL1Q9UNK9 670 aaKnown RBP13.52□□□□□ -0.24
SEC16A-207ENST00000453963 FPGT-TNNI3KV9GXZ4 949 aa13.52□□□□□ -0.24
SEC16A-207ENST00000453963 ADGRL2O95490 1459 aa13.52□□□□□ -0.25
SEC16A-207ENST00000453963 MAGEB6P1A0A0J9YX57 407 aa13.52□□□□□ -0.25
SEC16A-207ENST00000453963 TLDC2A0PJX2 215 aa13.52□□□□□ -0.25
SEC16A-207ENST00000453963 RXRAP19793 462 aa13.52□□□□□ -0.25
SEC16A-207ENST00000453963 GNA11P29992 359 aa13.52□□□□□ -0.25
SEC16A-207ENST00000453963 GRIPAP1Q4V328 841 aa13.52□□□□□ -0.25
SEC16A-207ENST00000453963 PAIP2Q9BPZ3 127 aaKnown RBP13.52□□□□□ -0.25
SEC16A-207ENST00000453963 VPS16Q9H269 839 aa13.52□□□□□ -0.25
SEC16A-207ENST00000453963 PLCD1P51178 756 aa13.52□□□□□ -0.25
SEC16A-207ENST00000453963 SPATA24Q86W54 205 aa13.52□□□□□ -0.25
SEC16A-207ENST00000453963 XPO4Q9C0E2 1151 aaKnown RBP13.52□□□□□ -0.25
SEC16A-207ENST00000453963 ANTXR1Q9H6X2 564 aa13.52□□□□□ -0.25
SEC16A-207ENST00000453963 SYNRGQ9UMZ2 1314 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 VWA3AA6NCI4 1184 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 ARHGAP25P42331 645 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 BICD1Q96G01 975 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 NOC4LQ9BVI4 516 aaKnown RBP13.51□□□□□ -0.25
SEC16A-207ENST00000453963 CTNND2Q9UQB3 1225 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 KIAA0232Q92628 1395 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 PPFIA1Q13136 1202 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 RPGRIP1Q96KN7 1286 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 NCOA5Q9HCD5 579 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms