RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 SENP7Q9BQF6 1050 aa9.4□□□□□ -0.9
VTI1A-202ENST00000432306 USP44Q9H0E7 712 aa9.4□□□□□ -0.9
VTI1A-202ENST00000432306 CBX8Q9HC52 389 aa9.4□□□□□ -0.9
VTI1A-202ENST00000432306 TMEM51Q9NW97 253 aa9.4□□□□□ -0.9
VTI1A-202ENST00000432306 AXIN2Q9Y2T1 843 aa9.4□□□□□ -0.9
VTI1A-202ENST00000432306 PALM3A6NDB9 673 aaPredicted RBP9.39□□□□□ -0.91
VTI1A-202ENST00000432306 F6X3S4 739 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 RIMBP2O15034 1052 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 DHX8Q14562 1220 aaKnown RBP9.39□□□□□ -0.91
VTI1A-202ENST00000432306 RRS1Q15050 365 aaKnown RBP9.39□□□□□ -0.91
VTI1A-202ENST00000432306 TSGA10IPQ3SY00 556 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 TSHZ3Q63HK5 1081 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 SDR16C5Q8N3Y7 309 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 RHPN1Q8TCX5 695 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 RUFY2Q8WXA3 655 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 STK31Q9BXU1 1019 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 BSDC1Q9NW68 430 aaPredicted RBP9.39□□□□□ -0.91
VTI1A-202ENST00000432306 CACNA1FO60840 1977 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 FAM177BA6PVY3 158 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 TULP2O00295 520 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 GLRX3O76003 335 aaKnown RBP9.39□□□□□ -0.91
VTI1A-202ENST00000432306 KIF4AO95239 1232 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 LARGE1O95461 756 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 HSPA6P17066 643 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 GTF2E1P29083 439 aaPredicted RBP9.39□□□□□ -0.91
VTI1A-202ENST00000432306 TCEAL1Q15170 157 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 ZNF827Q17R98 1081 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 RNF187Q5TA31 235 aaPredicted RBP9.39□□□□□ -0.91
VTI1A-202ENST00000432306 ARHGEF25Q86VW2 580 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 ACSBG1Q96GR2 724 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 PHOX2BQ99453 314 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 L2HGDHQ9H9P8 463 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 LHX6Q9UPM6 363 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 TBC1D2BQ9UPU7 963 aa9.39□□□□□ -0.91
VTI1A-202ENST00000432306 IGSF1Q8N6C5 1336 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 HOXA2O43364 376 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 WDHD1O75717 1129 aaPredicted RBP9.38□□□□□ -0.91
VTI1A-202ENST00000432306 BIRC2Q13490 618 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 ANKRD1Q15327 319 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 SLC27A3Q5K4L6 730 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 LRRC8AQ8IWT6 810 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 AMOTL1Q8IY63 956 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 MPNDQ8N594 471 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 CACTINQ8WUQ7 758 aaKnown RBP9.38□□□□□ -0.91
VTI1A-202ENST00000432306 DHX38Q92620 1227 aaKnown RBP9.38□□□□□ -0.91
VTI1A-202ENST00000432306 SCYL1Q96KG9 808 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 IRF2BPLQ9H1B7 796 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 TNMDQ9H2S6 317 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 PDRG1Q9NUG6 133 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 PRKAG2Q9UGJ0 569 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 TSPYL4Q9UJ04 414 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 LRRFIP2Q9Y608 721 aaKnown RBP9.38□□□□□ -0.91
VTI1A-202ENST00000432306 CYP46A1Q9Y6A2 500 aa9.38□□□□□ -0.91
VTI1A-202ENST00000432306 TCHHQ07283 1943 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 CTAGE5O15320 804 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 HOXB7P09629 217 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 CASTP20810 708 aaKnown RBP9.37□□□□□ -0.91
VTI1A-202ENST00000432306 RHBDL3P58872 404 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 IQCB1Q15051 598 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 ME3Q16798 604 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 PLEKHG6Q3KR16 790 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 ANO6Q4KMQ2 910 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 CEP135Q66GS9 1140 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 SLC4A10Q6U841 1118 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 FBXO33Q7Z6M2 555 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 C11orf96Q7Z7L8 435 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 LUZP1Q86V48 1076 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 SPC24Q8NBT2 197 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 C16orf45Q96MC5 204 aaPredicted RBP9.37□□□□□ -0.91
VTI1A-202ENST00000432306 TMUB1Q9BVT8 246 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 ERBB3P21860 1342 aa9.37□□□□□ -0.91
VTI1A-202ENST00000432306 HIP1O00291 1037 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 UBTFL1P0CB47 393 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-202ENST00000432306 H2AFXP16104 143 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-202ENST00000432306 ATP2B1P20020 1258 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 PSMA5P28066 241 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 ZNF165P49910 485 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 LRMPQ12912 555 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 KMT5BQ4FZB7 885 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 PADI6Q6TGC4 694 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 ZNF771Q7L3S4 317 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-202ENST00000432306 CCDC83Q8IWF9 413 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 NLGN2Q8NFZ4 835 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 MAP4K1Q92918 833 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 PIF1Q9H611 641 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 DACT1Q9NYF0 836 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 CALCOCO1Q9P1Z2 691 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 COL4A3BPQ9Y5P4 624 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 CEP350Q5VT06 3117 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 TBX4P57082 545 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 HDLBPQ00341 1268 aaKnown RBP9.36□□□□□ -0.91
VTI1A-202ENST00000432306 MTHFSDQ2M296 383 aaKnown RBP9.36□□□□□ -0.91
VTI1A-202ENST00000432306 LARP1BQ659C4 914 aaKnown RBP9.36□□□□□ -0.91
VTI1A-202ENST00000432306 ATL3Q6DD88 541 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 PHLDB3Q6NSJ2 640 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 LEO1Q8WVC0 666 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-202ENST00000432306 TRIM34Q9BYJ4 488 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 TRIM5Q9C035 493 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 TSPYL1Q9H0U9 437 aa9.36□□□□□ -0.91
VTI1A-202ENST00000432306 OSBPL5Q9H0X9 879 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms