RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, human

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDGFA-205	ENST00000426681	NDUFB9	Q9Y6M9	179 aa		28.61	■■■□□ 2.17
PDGFA-205	ENST00000426681	IGHD	P01880	384 aa		28.6	■■■□□ 2.17
PDGFA-205	ENST00000426681	NF2	P35240	595 aa		28.6	■■■□□ 2.17
PDGFA-205	ENST00000426681	DEFB115	Q30KQ5	88 aa		28.6	■■■□□ 2.17
PDGFA-205	ENST00000426681	TMED8	Q6PL24	325 aa	Predicted RBP	28.6	■■■□□ 2.17
PDGFA-205	ENST00000426681	ANTXR1	Q9H6X2	564 aa		28.6	■■■□□ 2.17
PDGFA-205	ENST00000426681	USP40	Q9NVE5	1235 aa		28.6	■■■□□ 2.17
PDGFA-205	ENST00000426681	DOCK2	Q92608	1830 aa		28.59	■■■□□ 2.17
PDGFA-205	ENST00000426681	CACNB3	P54284	484 aa		28.59	■■■□□ 2.17
PDGFA-205	ENST00000426681	SUPT20HL1	Q3ZLR7	823 aa		28.59	■■■□□ 2.17
PDGFA-205	ENST00000426681	ANKRD45	Q5TZF3	282 aa		28.59	■■■□□ 2.17
PDGFA-205	ENST00000426681	NAA16	Q6N069	864 aa	Predicted RBP	28.59	■■■□□ 2.17
PDGFA-205	ENST00000426681	HAUS7	Q99871	368 aa		28.59	■■■□□ 2.17
PDGFA-205	ENST00000426681	MKRN1	Q9UHC7	482 aa	Known RBP	28.59	■■■□□ 2.17
PDGFA-205	ENST00000426681	PAPPA2	Q9BXP8	1791 aa		28.59	■■■□□ 2.17
PDGFA-205	ENST00000426681	MAP4K4	O95819	1239 aa	Predicted RBP	28.58	■■■□□ 2.17
PDGFA-205	ENST00000426681	BTD	P43251	543 aa		28.58	■■■□□ 2.17
PDGFA-205	ENST00000426681	GPATCH3	Q96I76	525 aa		28.58	■■■□□ 2.17
PDGFA-205	ENST00000426681	TEPSIN	Q96N21	525 aa		28.58	■■■□□ 2.17
PDGFA-205	ENST00000426681	BOLA2	Q9H3K6	86 aa		28.58	■■■□□ 2.17
PDGFA-205	ENST00000426681	IDH1	O75874	414 aa	Known RBP	28.57	■■■□□ 2.16
PDGFA-205	ENST00000426681	MAP3K12	Q12852	859 aa		28.57	■■■□□ 2.16
PDGFA-205	ENST00000426681	DNAJC2	Q99543	621 aa	Known RBP	28.57	■■■□□ 2.16
PDGFA-205	ENST00000426681	ZBTB47	Q9UFB7	747 aa	Predicted RBP	28.57	■■■□□ 2.16
PDGFA-205	ENST00000426681	HUNK	P57058	714 aa		28.56	■■■□□ 2.16
PDGFA-205	ENST00000426681	NBPF12	Q5TAG4	269 aa	Predicted RBP	28.56	■■■□□ 2.16
PDGFA-205	ENST00000426681	IDI2	Q9BXS1	227 aa		28.56	■■■□□ 2.16
PDGFA-205	ENST00000426681	TMEM39B	Q9GZU3	492 aa		28.56	■■■□□ 2.16
PDGFA-205	ENST00000426681	TTC41P	Q6P2S7	1318 aa		28.55	■■■□□ 2.16
PDGFA-205	ENST00000426681	GOLIM4	O00461	696 aa		28.55	■■■□□ 2.16
PDGFA-205	ENST00000426681	RHBDL3	P58872	404 aa		28.55	■■■□□ 2.16
PDGFA-205	ENST00000426681	PAG1	Q9NWQ8	432 aa		28.55	■■■□□ 2.16
PDGFA-205	ENST00000426681	SSC5D	A1L4H1	1573 aa		28.54	■■■□□ 2.16
PDGFA-205	ENST00000426681	RFX7	Q2KHR2	1363 aa		28.54	■■■□□ 2.16
PDGFA-205	ENST00000426681	PPP4C	P60510	307 aa		28.54	■■■□□ 2.16
PDGFA-205	ENST00000426681	NFIA	Q12857	509 aa		28.54	■■■□□ 2.16
PDGFA-205	ENST00000426681	FAM151A	Q8WW52	585 aa		28.54	■■■□□ 2.16
PDGFA-205	ENST00000426681	FAM198A	Q9UFP1	575 aa		28.54	■■■□□ 2.16
PDGFA-205	ENST00000426681	RPAP1	Q9BWH6	1393 aa	Predicted RBP	28.53	■■■□□ 2.16
PDGFA-205	ENST00000426681	WDHD1	O75717	1129 aa	Predicted RBP	28.53	■■■□□ 2.16
PDGFA-205	ENST00000426681	VEGFB	P49765	207 aa		28.53	■■■□□ 2.16
PDGFA-205	ENST00000426681	ADGRA1	Q86SQ6	560 aa		28.53	■■■□□ 2.16
PDGFA-205	ENST00000426681	OTUD7A	Q8TE49	926 aa	Predicted RBP	28.53	■■■□□ 2.16
PDGFA-205	ENST00000426681	SALL3	Q9BXA9	1300 aa		28.52	■■■□□ 2.16
PDGFA-205	ENST00000426681	ENTPD3	O75355	529 aa		28.52	■■■□□ 2.16
PDGFA-205	ENST00000426681	NPM3	O75607	178 aa	Known RBP	28.52	■■■□□ 2.16
PDGFA-205	ENST00000426681	BAG3	O95817	575 aa		28.52	■■■□□ 2.16
PDGFA-205	ENST00000426681	CYP7A1	P22680	504 aa		28.52	■■■□□ 2.16
PDGFA-205	ENST00000426681	MAP3K11	Q16584	847 aa		28.52	■■■□□ 2.16
PDGFA-205	ENST00000426681	ARMC9	Q7Z3E5	817 aa		28.52	■■■□□ 2.16
PDGFA-205	ENST00000426681	CDAN1	Q8IWY9	1227 aa		28.52	■■■□□ 2.16
PDGFA-205	ENST00000426681	MAGEB6	Q8N7X4	407 aa		28.52	■■■□□ 2.16
PDGFA-205	ENST00000426681	JMY	Q8N9B5	988 aa		28.52	■■■□□ 2.16
PDGFA-205	ENST00000426681	EDC3	Q96F86	508 aa	Known RBP	28.52	■■■□□ 2.16
PDGFA-205	ENST00000426681	NOL10	Q9BSC4	688 aa	Known RBP	28.52	■■■□□ 2.16
PDGFA-205	ENST00000426681	PPP1R12B	O60237	982 aa	Predicted RBP	28.51	■■■□□ 2.15
PDGFA-205	ENST00000426681	ECE1	P42892	770 aa		28.51	■■■□□ 2.15
PDGFA-205	ENST00000426681	TTLL12	Q14166	644 aa	Predicted RBP	28.51	■■■□□ 2.15
PDGFA-205	ENST00000426681	MOB2	Q70IA6	237 aa		28.51	■■■□□ 2.15
PDGFA-205	ENST00000426681	UBE2Q2L	H0YL09	131 aa		28.5	■■■□□ 2.15
PDGFA-205	ENST00000426681	PLCG2	P16885	1265 aa		28.5	■■■□□ 2.15
PDGFA-205	ENST00000426681	MX1	P20591	662 aa		28.5	■■■□□ 2.15
PDGFA-205	ENST00000426681	NUCB1	Q02818	461 aa		28.5	■■■□□ 2.15
PDGFA-205	ENST00000426681	TCP10	Q12799	353 aa		28.5	■■■□□ 2.15
PDGFA-205	ENST00000426681	RGMB	Q6NW40	437 aa		28.5	■■■□□ 2.15
PDGFA-205	ENST00000426681	CAPNS2	Q96L46	248 aa		28.5	■■■□□ 2.15
PDGFA-205	ENST00000426681	WDR33	Q9C0J8	1336 aa	Known RBP	28.49	■■■□□ 2.15
PDGFA-205	ENST00000426681	ERC2	O15083	957 aa		28.49	■■■□□ 2.15
PDGFA-205	ENST00000426681	RGS3	P49796	1198 aa		28.49	■■■□□ 2.15
PDGFA-205	ENST00000426681	LDLRAD1	Q5T700	205 aa		28.49	■■■□□ 2.15
PDGFA-205	ENST00000426681	SLC9C2	Q5TAH2	1124 aa		28.49	■■■□□ 2.15
PDGFA-205	ENST00000426681	TSHZ3	Q63HK5	1081 aa		28.49	■■■□□ 2.15
PDGFA-205	ENST00000426681	CYP4F22	Q6NT55	531 aa		28.49	■■■□□ 2.15
PDGFA-205	ENST00000426681	HOOK2	Q96ED9	719 aa		28.49	■■■□□ 2.15
PDGFA-205	ENST00000426681	AATF	Q9NY61	560 aa	Known RBP eCLIP	28.49	■■■□□ 2.15
PDGFA-205	ENST00000426681	GLRX3	O76003	335 aa	Known RBP	28.48	■■■□□ 2.15
PDGFA-205	ENST00000426681	PDE6A	P16499	860 aa		28.48	■■■□□ 2.15
PDGFA-205	ENST00000426681	PRKG1	Q13976	671 aa		28.48	■■■□□ 2.15
PDGFA-205	ENST00000426681	CERS3	Q8IU89	383 aa		28.48	■■■□□ 2.15
PDGFA-205	ENST00000426681	PI4K2B	Q8TCG2	481 aa		28.48	■■■□□ 2.15
PDGFA-205	ENST00000426681	STAP2	Q9UGK3	403 aa		28.48	■■■□□ 2.15
PDGFA-205	ENST00000426681	ANGEL1	Q9UNK9	670 aa	Known RBP	28.48	■■■□□ 2.15
PDGFA-205	ENST00000426681	UNCX	A6NJT0	531 aa		28.47	■■■□□ 2.15
PDGFA-205	ENST00000426681	USP2	O75604	605 aa	Predicted RBP	28.47	■■■□□ 2.15
PDGFA-205	ENST00000426681	B4GALNT3	Q6L9W6	998 aa		28.47	■■■□□ 2.15
PDGFA-205	ENST00000426681	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	28.47	■■■□□ 2.15
PDGFA-205	ENST00000426681	CHD1L	Q86WJ1	897 aa		28.47	■■■□□ 2.15
PDGFA-205	ENST00000426681	ZFPM1	Q8IX07	1006 aa		28.47	■■■□□ 2.15
PDGFA-205	ENST00000426681	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	28.47	■■■□□ 2.15
PDGFA-205	ENST00000426681	CCDC102A	Q96A19	550 aa		28.47	■■■□□ 2.15
PDGFA-205	ENST00000426681	LNPK	Q9C0E8	428 aa		28.47	■■■□□ 2.15
PDGFA-205	ENST00000426681	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	28.47	■■■□□ 2.15
PDGFA-205	ENST00000426681	DDX4	Q9NQI0	724 aa	Known RBP	28.47	■■■□□ 2.15
PDGFA-205	ENST00000426681	TCRBV5S4A2T	A0A5A2	114 aa		28.46	■■■□□ 2.15
PDGFA-205	ENST00000426681	TEX11	Q8IYF3	940 aa		28.46	■■■□□ 2.15
PDGFA-205	ENST00000426681	IREB2	P48200	963 aa	Known RBP	28.45	■■■□□ 2.14
PDGFA-205	ENST00000426681	ZNF157	P51786	506 aa	Predicted RBP	28.45	■■■□□ 2.14
PDGFA-205	ENST00000426681	FZD1	Q9UP38	647 aa		28.45	■■■□□ 2.14
PDGFA-205	ENST00000426681	ZNF532	Q9HCE3	1301 aa		28.44	■■■□□ 2.14
PDGFA-205	ENST00000426681	AK9	Q5TCS8	1911 aa		28.44	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms