RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 TRIM5Q9C035 493 aa16.1■□□□□ 0.17
CCT6P3-201ENST00000419314 F8W031 263 aaPredicted RBP16.09■□□□□ 0.17
CCT6P3-201ENST00000419314 KLRK1P26718 216 aa16.09■□□□□ 0.17
CCT6P3-201ENST00000419314 ST5P78524 1137 aa16.09■□□□□ 0.17
CCT6P3-201ENST00000419314 MB21D2Q8IYB1 491 aaPredicted RBP16.09■□□□□ 0.17
CCT6P3-201ENST00000419314 DDX19AQ9NUU7 478 aaKnown RBP16.09■□□□□ 0.17
CCT6P3-201ENST00000419314 MCM9Q9NXL9 1143 aa16.09■□□□□ 0.17
CCT6P3-201ENST00000419314 USP17L12C9JPN9 530 aa16.09■□□□□ 0.17
CCT6P3-201ENST00000419314 USP17L21D6R901 530 aa16.09■□□□□ 0.17
CCT6P3-201ENST00000419314 RIMBP2O15034 1052 aa16.09■□□□□ 0.17
CCT6P3-201ENST00000419314 FGFR2P21802 821 aa16.09■□□□□ 0.17
CCT6P3-201ENST00000419314 ZNF830Q96NB3 372 aaPredicted RBP16.09■□□□□ 0.17
CCT6P3-201ENST00000419314 CRNKL1Q9BZJ0 848 aaKnown RBP16.09■□□□□ 0.17
CCT6P3-201ENST00000419314 MKNK2Q9HBH9 465 aa16.08■□□□□ 0.17
CCT6P3-201ENST00000419314 SENP2Q9HC62 589 aa16.08■□□□□ 0.17
CCT6P3-201ENST00000419314 NEDD4P46934 1319 aa16.08■□□□□ 0.17
CCT6P3-201ENST00000419314 RIC1Q4ADV7 1423 aa16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 TSPY2A6NKD2 308 aa16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 NR1I2O75469 434 aa16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 UFL1O94874 794 aa16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 ADCY5O95622 1261 aa16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 TMEM87BQ96K49 555 aa16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 ZNF804BA4D1E1 1349 aa16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 A0A1B0GVL5 298 aa16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 BIN1O00499 593 aa16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 PPARAQ07869 468 aa16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 ISM2Q6H9L7 571 aa16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 FAM84BQ96KN1 310 aaPredicted RBP16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 ALDH8A1Q9H2A2 487 aaPredicted RBP16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 XIRP1Q702N8 1843 aaKnown RBP16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 PKD1L3Q7Z443 1732 aa16.08■□□□□ 0.16
CCT6P3-201ENST00000419314 CTDNEP1O95476 244 aa16.07■□□□□ 0.16
CCT6P3-201ENST00000419314 ANTXR2P58335 489 aa16.07■□□□□ 0.16
CCT6P3-201ENST00000419314 RESTQ13127 1097 aa16.07■□□□□ 0.16
CCT6P3-201ENST00000419314 APOA5Q6Q788 366 aa16.07■□□□□ 0.16
CCT6P3-201ENST00000419314 CCDC39Q9UFE4 941 aa16.07■□□□□ 0.16
CCT6P3-201ENST00000419314 GSG1L2A8MUP6 293 aa16.07■□□□□ 0.16
CCT6P3-201ENST00000419314 IFIT1BQ5T764 474 aaKnown RBP16.07■□□□□ 0.16
CCT6P3-201ENST00000419314 PRDX5P30044 214 aa16.07■□□□□ 0.16
CCT6P3-201ENST00000419314 TYRO3Q06418 890 aa16.07■□□□□ 0.16
CCT6P3-201ENST00000419314 NFIXQ14938 502 aa16.07■□□□□ 0.16
CCT6P3-201ENST00000419314 ANO6Q4KMQ2 910 aa16.07■□□□□ 0.16
CCT6P3-201ENST00000419314 CARMIL3Q8ND23 1372 aa16.07■□□□□ 0.16
CCT6P3-201ENST00000419314 SIPA1L3O60292 1781 aaPredicted RBP16.06■□□□□ 0.16
CCT6P3-201ENST00000419314 ARFGEF2Q9Y6D5 1785 aa16.06■□□□□ 0.16
CCT6P3-201ENST00000419314 FAM47AQ5JRC9 791 aa16.06■□□□□ 0.16
CCT6P3-201ENST00000419314 CATIPQ7Z7H3 387 aa16.06■□□□□ 0.16
CCT6P3-201ENST00000419314 ZSCAN30Q86W11 494 aa16.06■□□□□ 0.16
CCT6P3-201ENST00000419314 DNAJC25Q9H1X3 360 aa16.06■□□□□ 0.16
CCT6P3-201ENST00000419314 EPB41L4AQ9HCS5 686 aaPredicted RBP16.06■□□□□ 0.16
CCT6P3-201ENST00000419314 CCDC196A0A1B0GTZ2 297 aa16.06■□□□□ 0.16
CCT6P3-201ENST00000419314 LDHBP07195 334 aaKnown RBP16.06■□□□□ 0.16
CCT6P3-201ENST00000419314 SF3B3Q15393 1217 aaKnown RBP16.06■□□□□ 0.16
CCT6P3-201ENST00000419314 BCL11BQ9C0K0 894 aaPredicted RBP16.06■□□□□ 0.16
CCT6P3-201ENST00000419314 XBP1P17861 261 aa16.06■□□□□ 0.16
CCT6P3-201ENST00000419314 KCNJ14Q9UNX9 436 aa16.06■□□□□ 0.16
CCT6P3-201ENST00000419314 KRT40Q6A162 431 aa16.05■□□□□ 0.16
CCT6P3-201ENST00000419314 LUZP1Q86V48 1076 aa16.05■□□□□ 0.16
CCT6P3-201ENST00000419314 A0A087WWV3 80 aa16.05■□□□□ 0.16
CCT6P3-201ENST00000419314 SPTLC2O15270 562 aa16.05■□□□□ 0.16
CCT6P3-201ENST00000419314 ZNF165P49910 485 aa16.05■□□□□ 0.16
CCT6P3-201ENST00000419314 SH2B2O14492 632 aaPredicted RBP16.05■□□□□ 0.16
CCT6P3-201ENST00000419314 TMEM87AQ8NBN3 555 aa16.05■□□□□ 0.16
CCT6P3-201ENST00000419314 FBXO18Q8NFZ0 1043 aa16.05■□□□□ 0.16
CCT6P3-201ENST00000419314 ZNF622Q969S3 477 aaKnown RBP eCLIP16.05■□□□□ 0.168e-6■■■□□ 17.8
CCT6P3-201ENST00000419314 SAP30BPQ9UHR5 308 aaKnown RBP16.05■□□□□ 0.16
CCT6P3-201ENST00000419314 SPTY2D1Q68D10 685 aaPredicted RBP16.04■□□□□ 0.16
CCT6P3-201ENST00000419314 SMARCC2Q8TAQ2 1214 aa16.04■□□□□ 0.16
CCT6P3-201ENST00000419314 SERPINB2P05120 415 aa16.04■□□□□ 0.16
CCT6P3-201ENST00000419314 ZNF512BQ96KM6 892 aaPredicted RBP16.04■□□□□ 0.16
CCT6P3-201ENST00000419314 CTCFLQ8NI51 663 aaPredicted RBP16.04■□□□□ 0.16
CCT6P3-201ENST00000419314 CERKQ8TCT0 537 aa16.04■□□□□ 0.16
CCT6P3-201ENST00000419314 WASF1Q92558 559 aa16.04■□□□□ 0.16
CCT6P3-201ENST00000419314 PGBD1Q96JS3 809 aa16.04■□□□□ 0.16
CCT6P3-201ENST00000419314 BCL2L12Q9HB09 334 aa16.04■□□□□ 0.16
CCT6P3-201ENST00000419314 STX8Q9UNK0 236 aa16.04■□□□□ 0.16
CCT6P3-201ENST00000419314 GOLGA6L6A8MZA4 724 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 MECOMQ03112 1051 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 MSL1Q68DK7 614 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 KRT27Q7Z3Y8 459 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 FNBP4Q8N3X1 1017 aaPredicted RBP16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 JMYQ8N9B5 988 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 RASSF8Q8NHQ8 419 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 CLIC4Q9Y696 253 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 ABCC12Q96J65 1359 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 COL14A1Q05707 1796 aaKnown RBP16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 CDC27P30260 824 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 DIXDC1Q155Q3 683 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 ZNF804AQ7Z570 1209 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 TICAM2Q86XR7 235 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 MRPS27Q92552 414 aaKnown RBP16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 ATP2B2Q01814 1243 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 PDE4BQ07343 736 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 TXNRD3Q86VQ6 643 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 ZNF444Q8N0Y2 327 aaPredicted RBP16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 TMTC2Q8N394 836 aa16.03■□□□□ 0.16
CCT6P3-201ENST00000419314 TNKSO95271 1327 aa16.02■□□□□ 0.16
CCT6P3-201ENST00000419314 CNTNAP4Q9C0A0 1308 aa16.02■□□□□ 0.16
CCT6P3-201ENST00000419314 SMIM22K7EJ46 135 aa16.02■□□□□ 0.16
CCT6P3-201ENST00000419314 MYSM1Q5VVJ2 828 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms