RNA–Protein interactions for RNA: ENST00000417463.1

AP000550.2-201, humanhuman

TSL 5 BASIC

Gene AP000550.2, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.2-201ENST00000417463 TRIM42Q8IWZ5 723 aa6.6□□□□□ -1.35
AP000550.2-201ENST00000417463 SMG8Q8ND04 991 aaKnown RBP6.6□□□□□ -1.35
AP000550.2-201ENST00000417463 RUSC1Q9BVN2 902 aa6.6□□□□□ -1.35
AP000550.2-201ENST00000417463 AKTIPQ9H8T0 292 aa6.6□□□□□ -1.35
AP000550.2-201ENST00000417463 KBTBD4Q9NVX7 518 aa6.6□□□□□ -1.35
AP000550.2-201ENST00000417463 USP21Q9UK80 565 aa6.6□□□□□ -1.35
AP000550.2-201ENST00000417463 TFE3P19532 575 aaPredicted RBP6.59□□□□□ -1.35
AP000550.2-201ENST00000417463 LMNB1P20700 586 aa6.59□□□□□ -1.35
AP000550.2-201ENST00000417463 KIF4BQ2VIQ3 1234 aa6.59□□□□□ -1.35
AP000550.2-201ENST00000417463 MAP1SQ66K74 1059 aaPredicted RBP6.59□□□□□ -1.35
AP000550.2-201ENST00000417463 ANKRD34AQ69YU3 496 aa6.59□□□□□ -1.35
AP000550.2-201ENST00000417463 GRIN3AQ8TCU5 1115 aa6.59□□□□□ -1.35
AP000550.2-201ENST00000417463 KCNB2Q92953 911 aa6.59□□□□□ -1.35
AP000550.2-201ENST00000417463 CCDC86Q9H6F5 360 aaKnown RBP6.59□□□□□ -1.35
AP000550.2-201ENST00000417463 CBX8Q9HC52 389 aa6.59□□□□□ -1.35
AP000550.2-201ENST00000417463 CYP4F12Q9HCS2 524 aa6.59□□□□□ -1.35
AP000550.2-201ENST00000417463 DDX41Q9UJV9 622 aaKnown RBP6.59□□□□□ -1.35
AP000550.2-201ENST00000417463 TLR6Q9Y2C9 796 aa6.59□□□□□ -1.35
AP000550.2-201ENST00000417463 ZNF862O60290 1169 aa6.58□□□□□ -1.36
AP000550.2-201ENST00000417463 GBP2P32456 591 aaPredicted RBP6.58□□□□□ -1.36
AP000550.2-201ENST00000417463 CAMK2GQ13555 558 aaPredicted RBP6.58□□□□□ -1.36
AP000550.2-201ENST00000417463 MBTPS1Q14703 1052 aa6.58□□□□□ -1.36
AP000550.2-201ENST00000417463 MAP3K11Q16584 847 aa6.58□□□□□ -1.36
AP000550.2-201ENST00000417463 NUTM2GQ5VZR2 741 aa6.58□□□□□ -1.36
AP000550.2-201ENST00000417463 USP48Q86UV5 1035 aa6.58□□□□□ -1.36
AP000550.2-201ENST00000417463 TXNRD3Q86VQ6 643 aa6.58□□□□□ -1.36
AP000550.2-201ENST00000417463 NT5DC4Q86YG4 428 aa6.58□□□□□ -1.36
AP000550.2-201ENST00000417463 WFDC12Q8WWY7 111 aa6.58□□□□□ -1.36
AP000550.2-201ENST00000417463 COPRSQ9NQ92 184 aa6.58□□□□□ -1.36
AP000550.2-201ENST00000417463 AOC2O75106 756 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 TIAF1O95411 115 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 SLFN14P0C7P3 912 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 EIF4A3P38919 411 aaKnown RBP6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 CHRNA4P43681 627 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 RAD51AP2Q09MP3 1159 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 PDE3AQ14432 1141 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 DIEXFQ68CQ4 756 aaKnown RBP6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 CD163Q86VB7 1156 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 ZNF654Q8IZM8 581 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 GAL3ST3Q96A11 431 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 WDR18Q9BV38 432 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 CEP41Q9BYV8 373 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 ZC3H12CQ9C0D7 883 aaKnown RBP6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 TGIF2Q9GZN2 237 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 MIR1-1HGQ9H1L0 117 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 PCDHGC5Q9Y5F6 944 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 ROBO2Q9HCK4 1378 aa6.57□□□□□ -1.36
AP000550.2-201ENST00000417463 C1QTNF9BB2RNN3 333 aa6.56□□□□□ -1.36
AP000550.2-201ENST00000417463 GREM1O60565 184 aa6.56□□□□□ -1.36
AP000550.2-201ENST00000417463 GDF11O95390 407 aa6.56□□□□□ -1.36
AP000550.2-201ENST00000417463 PF4P02776 101 aa6.56□□□□□ -1.36
AP000550.2-201ENST00000417463 GARTP22102 1010 aa6.56□□□□□ -1.36
AP000550.2-201ENST00000417463 NOS3P29474 1203 aa6.56□□□□□ -1.36
AP000550.2-201ENST00000417463 RACK1P63244 317 aaKnown RBP6.56□□□□□ -1.36
AP000550.2-201ENST00000417463 UVSSAQ2YD98 709 aa6.56□□□□□ -1.36
AP000550.2-201ENST00000417463 ZNF394Q53GI3 561 aa6.56□□□□□ -1.36
AP000550.2-201ENST00000417463 DZIP1LQ8IYY4 767 aaKnown RBP6.56□□□□□ -1.36
AP000550.2-201ENST00000417463 GPBAR1Q8TDU6 330 aa6.56□□□□□ -1.36
AP000550.2-201ENST00000417463 WDR89Q96FK6 387 aaPredicted RBP6.56□□□□□ -1.36
AP000550.2-201ENST00000417463 RAD18Q9NS91 495 aa6.56□□□□□ -1.36
AP000550.2-201ENST00000417463 PCDHB5Q9Y5E4 795 aa6.56□□□□□ -1.36
AP000550.2-201ENST00000417463 MINDY4BA8MYZ0 360 aa6.55□□□□□ -1.36
AP000550.2-201ENST00000417463 LIG1P18858 919 aa6.55□□□□□ -1.36
AP000550.2-201ENST00000417463 IREB2P48200 963 aaKnown RBP6.55□□□□□ -1.36
AP000550.2-201ENST00000417463 SOX4Q06945 474 aaPredicted RBP6.55□□□□□ -1.36
AP000550.2-201ENST00000417463 ZC3H12AQ5D1E8 599 aaKnown RBP6.55□□□□□ -1.36
AP000550.2-201ENST00000417463 FDX2Q6P4F2 183 aa6.55□□□□□ -1.36
AP000550.2-201ENST00000417463 MPRIPQ6WCQ1 1025 aa6.55□□□□□ -1.36
AP000550.2-201ENST00000417463 AGGF1Q8N302 714 aaeCLIP6.55□□□□□ -1.36
AP000550.2-201ENST00000417463 TMEM151AQ8N4L1 468 aa6.55□□□□□ -1.36
AP000550.2-201ENST00000417463 GATAD2BQ8WXI9 593 aa6.55□□□□□ -1.36
AP000550.2-201ENST00000417463 GSX1Q9H4S2 264 aaPredicted RBP6.55□□□□□ -1.36
AP000550.2-201ENST00000417463 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.55□□□□□ -1.36
AP000550.2-201ENST00000417463 SUPT16HQ9Y5B9 1047 aaKnown RBP6.55□□□□□ -1.36
AP000550.2-201ENST00000417463 SNCAIPQ9Y6H5 919 aa6.55□□□□□ -1.36
AP000550.2-201ENST00000417463 FAM221AA4D161 298 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 CILPO75339 1184 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 ALX3O95076 343 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 ADH5P11766 374 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 ERCC5P28715 1186 aaPredicted RBP6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 ID3Q02535 119 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 C9orf131Q5VYM1 1079 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 FBXL19Q6PCT2 694 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 FAM196AQ6ZSG2 479 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 C12orf50Q8NA57 414 aaPredicted RBP6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 GOLM1Q8NBJ4 401 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 ZNF296Q8WUU4 475 aaPredicted RBP6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 ACSBG1Q96GR2 724 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 SSBP4Q9BWG4 385 aaPredicted RBP6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 NT5C1AQ9BXI3 368 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 LRRC3Q9BY71 257 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 CRIM1Q9NZV1 1036 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 ADAMTS1Q9UHI8 967 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 PCDHA4Q9UN74 947 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 TACC3Q9Y6A5 838 aa6.54□□□□□ -1.36
AP000550.2-201ENST00000417463 F6X3S4 739 aa6.53□□□□□ -1.36
AP000550.2-201ENST00000417463 TMPRSS2O15393 492 aa6.53□□□□□ -1.36
AP000550.2-201ENST00000417463 GLB1P16278 677 aa6.53□□□□□ -1.36
AP000550.2-201ENST00000417463 ERVK-24P63145 666 aa6.53□□□□□ -1.36
AP000550.2-201ENST00000417463 RPL6Q02878 288 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms