RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 DHX40Q8IX18 779 aaKnown RBP18.46■□□□□ 0.55
PCDH1-203ENST00000394536 MAPK8IP1Q9UQF2 711 aa18.46■□□□□ 0.55
PCDH1-203ENST00000394536 KNDC1Q76NI1 1749 aa18.45■□□□□ 0.54
PCDH1-203ENST00000394536 A0A1W2PQ27 194 aa18.45■□□□□ 0.54
PCDH1-203ENST00000394536 A0A1W2PQ64 194 aa18.45■□□□□ 0.54
PCDH1-203ENST00000394536 A0A1W2PQD8 194 aa18.45■□□□□ 0.54
PCDH1-203ENST00000394536 ZSCAN20P17040 1043 aaPredicted RBP18.45■□□□□ 0.54
PCDH1-203ENST00000394536 CYP7A1P22680 504 aa18.45■□□□□ 0.54
PCDH1-203ENST00000394536 CDC25BP30305 580 aa18.45■□□□□ 0.54
PCDH1-203ENST00000394536 USPL1Q5W0Q7 1092 aa18.45■□□□□ 0.54
PCDH1-203ENST00000394536 KCNB2Q92953 911 aa18.45■□□□□ 0.54
PCDH1-203ENST00000394536 AK7Q96M32 723 aa18.45■□□□□ 0.54
PCDH1-203ENST00000394536 SH3TC1Q8TE82 1336 aa18.45■□□□□ 0.54
PCDH1-203ENST00000394536 KIF23Q02241 960 aaPredicted RBP18.45■□□□□ 0.54
PCDH1-203ENST00000394536 SNAP23O00161 211 aa18.45■□□□□ 0.54
PCDH1-203ENST00000394536 PHACTR2O75167 634 aa18.45■□□□□ 0.54
PCDH1-203ENST00000394536 CCT6AP40227 531 aaKnown RBP18.45■□□□□ 0.54
PCDH1-203ENST00000394536 SERTAD1Q9UHV2 236 aa18.45■□□□□ 0.54
PCDH1-203ENST00000394536 SCARF1Q14162 830 aa18.44■□□□□ 0.54
PCDH1-203ENST00000394536 GRAMD1CQ8IYS0 662 aa18.44■□□□□ 0.54
PCDH1-203ENST00000394536 NLRP5P59047 1200 aa18.44■□□□□ 0.54
PCDH1-203ENST00000394536 TCIRG1Q13488 830 aa18.44■□□□□ 0.54
PCDH1-203ENST00000394536 SLC39A14Q15043 492 aa18.44■□□□□ 0.54
PCDH1-203ENST00000394536 KMT5BQ4FZB7 885 aa18.44■□□□□ 0.54
PCDH1-203ENST00000394536 SARM1Q6SZW1 724 aa18.44■□□□□ 0.54
PCDH1-203ENST00000394536 IQCA1Q86XH1 822 aa18.44■□□□□ 0.54
PCDH1-203ENST00000394536 GNL3LQ9NVN8 582 aaKnown RBP18.44■□□□□ 0.54
PCDH1-203ENST00000394536 MAGEC2Q9UBF1 373 aaPredicted RBP18.44■□□□□ 0.54
PCDH1-203ENST00000394536 COBLO75128 1261 aa18.44■□□□□ 0.54
PCDH1-203ENST00000394536 ERLIN1O75477 346 aa18.44■□□□□ 0.54
PCDH1-203ENST00000394536 TRIM75PA6NK02 468 aa18.43■□□□□ 0.54
PCDH1-203ENST00000394536 UQCRFS1P1P0C7P4 283 aa18.43■□□□□ 0.54
PCDH1-203ENST00000394536 IL2RBP14784 551 aa18.43■□□□□ 0.54
PCDH1-203ENST00000394536 EIF5P55010 431 aaKnown RBP18.43■□□□□ 0.54
PCDH1-203ENST00000394536 RBM6P78332 1123 aaKnown RBP18.43■□□□□ 0.54
PCDH1-203ENST00000394536 LEKR1Q6ZMV7 388 aa18.43■□□□□ 0.54
PCDH1-203ENST00000394536 POLR3EQ9NVU0 708 aa18.43■□□□□ 0.54
PCDH1-203ENST00000394536 RHOXF2BP0C7M4 288 aa18.43■□□□□ 0.54
PCDH1-203ENST00000394536 ZNF174Q15697 407 aa18.43■□□□□ 0.54
PCDH1-203ENST00000394536 ZNF569Q5MCW4 686 aa18.43■□□□□ 0.54
PCDH1-203ENST00000394536 CCDC47Q96A33 483 aaKnown RBP18.43■□□□□ 0.54
PCDH1-203ENST00000394536 RHOXF2Q9BQY4 288 aa18.43■□□□□ 0.54
PCDH1-203ENST00000394536 RRAGBQ5VZM2 374 aa18.43■□□□□ 0.54
PCDH1-203ENST00000394536 CATIPQ7Z7H3 387 aa18.43■□□□□ 0.54
PCDH1-203ENST00000394536 RNF41Q9H4P4 317 aaPredicted RBP18.43■□□□□ 0.54
PCDH1-203ENST00000394536 GREM2Q9H772 168 aa18.43■□□□□ 0.54
PCDH1-203ENST00000394536 CALCOCO1Q9P1Z2 691 aa18.43■□□□□ 0.54
PCDH1-203ENST00000394536 H7C1W4 665 aa18.42■□□□□ 0.54
PCDH1-203ENST00000394536 PHKA1P46020 1223 aa18.42■□□□□ 0.54
PCDH1-203ENST00000394536 CTCFLQ8NI51 663 aaPredicted RBP18.42■□□□□ 0.54
PCDH1-203ENST00000394536 KRT23Q9C075 422 aa18.42■□□□□ 0.54
PCDH1-203ENST00000394536 CCDC175P0C221 793 aa18.42■□□□□ 0.54
PCDH1-203ENST00000394536 GABPB1Q06547 395 aaPredicted RBP18.42■□□□□ 0.54
PCDH1-203ENST00000394536 LONRF3Q496Y0 759 aa18.42■□□□□ 0.54
PCDH1-203ENST00000394536 APOA5Q6Q788 366 aa18.42■□□□□ 0.54
PCDH1-203ENST00000394536 CADPS2Q86UW7 1296 aa18.42■□□□□ 0.54
PCDH1-203ENST00000394536 TIGD1Q96MW7 591 aa18.42■□□□□ 0.54
PCDH1-203ENST00000394536 NBPF26B4DH59 902 aa18.42■□□□□ 0.54
PCDH1-203ENST00000394536 CUTAO60888 179 aa18.42■□□□□ 0.54
PCDH1-203ENST00000394536 SEC31AO94979 1220 aaKnown RBP18.42■□□□□ 0.54
PCDH1-203ENST00000394536 EXOSC10Q01780 885 aaKnown RBP18.42■□□□□ 0.54
PCDH1-203ENST00000394536 NBPF14Q5TI25 921 aa18.42■□□□□ 0.54
PCDH1-203ENST00000394536 NBPF10Q6P3W6 841 aaKnown RBP18.42■□□□□ 0.54
PCDH1-203ENST00000394536 ATG9AQ7Z3C6 839 aa18.42■□□□□ 0.54
PCDH1-203ENST00000394536 NUTM2AQ8IVF1 878 aaPredicted RBP18.42■□□□□ 0.54
PCDH1-203ENST00000394536 NBPF15Q8N660 670 aa18.42■□□□□ 0.54
PCDH1-203ENST00000394536 EPC1Q9H2F5 836 aa18.42■□□□□ 0.54
PCDH1-203ENST00000394536 VWA3AA6NCI4 1184 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 GOLGA6L9A6NEM1 432 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 RFX5P48382 616 aaPredicted RBP18.41■□□□□ 0.54
PCDH1-203ENST00000394536 PPP2R3AQ06190 1150 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 POSTNQ15063 836 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 CCDC70Q6NSX1 233 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 PLIN2Q99541 437 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 TRIM34Q9BYJ4 488 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 ALDH8A1Q9H2A2 487 aaPredicted RBP18.41■□□□□ 0.54
PCDH1-203ENST00000394536 KIF28PB7ZC32 967 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 AXDND1Q5T1B0 1012 aaPredicted RBP18.41■□□□□ 0.54
PCDH1-203ENST00000394536 KIAA1328Q86T90 577 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 DLG5Q8TDM6 1919 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 ARHGAP6O43182 974 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 FDPSP14324 419 aaKnown RBP18.41■□□□□ 0.54
PCDH1-203ENST00000394536 PDE6AP16499 860 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 IGSF22Q8N9C0 903 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 TMEM87BQ96K49 555 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 VPS16Q9H269 839 aa18.41■□□□□ 0.54
PCDH1-203ENST00000394536 TMEM232C9JQI7 657 aa18.4■□□□□ 0.54
PCDH1-203ENST00000394536 SRRTQ9BXP5 876 aaKnown RBP18.4■□□□□ 0.54
PCDH1-203ENST00000394536 ACBD3Q9H3P7 528 aa18.4■□□□□ 0.54
PCDH1-203ENST00000394536 ST7Q9NRC1 585 aa18.4■□□□□ 0.54
PCDH1-203ENST00000394536 ZNHIT6Q9NWK9 470 aaKnown RBP18.4■□□□□ 0.54
PCDH1-203ENST00000394536 DDX41Q9UJV9 622 aaKnown RBP18.4■□□□□ 0.54
PCDH1-203ENST00000394536 JAG2Q9Y219 1238 aa18.4■□□□□ 0.54
PCDH1-203ENST00000394536 V9GY48 417 aaPredicted RBP18.4■□□□□ 0.54
PCDH1-203ENST00000394536 PXDNLA1KZ92 1463 aa18.4■□□□□ 0.54
PCDH1-203ENST00000394536 CCZ1BP86790 482 aa18.4■□□□□ 0.54
PCDH1-203ENST00000394536 CCZ1P86791 482 aaPredicted RBP18.4■□□□□ 0.54
PCDH1-203ENST00000394536 TAF3Q5VWG9 929 aa18.4■□□□□ 0.54
PCDH1-203ENST00000394536 KANK3Q6NY19 840 aa18.4■□□□□ 0.54
PCDH1-203ENST00000394536 CNNM2Q9H8M5 875 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms