RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 PRKAB2O43741 272 aa18.76■□□□□ 0.59
IFT140-201ENST00000361339 CCDC69A6NI79 296 aa18.75■□□□□ 0.59
IFT140-201ENST00000361339 BECN2A8MW95 431 aa18.75■□□□□ 0.59
IFT140-201ENST00000361339 ZFYP08048 801 aaPredicted RBP18.75■□□□□ 0.59
IFT140-201ENST00000361339 HNRNPH2P55795 449 aaKnown RBP18.75■□□□□ 0.59
IFT140-201ENST00000361339 IPO4Q8TEX9 1081 aaKnown RBP18.75■□□□□ 0.59
IFT140-201ENST00000361339 C8orf76Q96K31 380 aa18.75■□□□□ 0.59
IFT140-201ENST00000361339 ZNF446Q9NWS9 450 aa18.75■□□□□ 0.59
IFT140-201ENST00000361339 PDE8AO60658 829 aa18.75■□□□□ 0.59
IFT140-201ENST00000361339 PDIA4P13667 645 aaKnown RBP18.75■□□□□ 0.59
IFT140-201ENST00000361339 CDC27P30260 824 aa18.75■□□□□ 0.59
IFT140-201ENST00000361339 RASGRF1Q13972 1273 aa18.75■□□□□ 0.59
IFT140-201ENST00000361339 MICU3Q86XE3 530 aa18.75■□□□□ 0.59
IFT140-201ENST00000361339 NEK11Q8NG66 645 aa18.75■□□□□ 0.59
IFT140-201ENST00000361339 ENGASEQ8NFI3 743 aa18.75■□□□□ 0.59
IFT140-201ENST00000361339 ARMT1Q9H993 441 aa18.75■□□□□ 0.59
IFT140-201ENST00000361339 EPB41L4AQ9HCS5 686 aaPredicted RBP18.75■□□□□ 0.59
IFT140-201ENST00000361339 DISP2A7MBM2 1401 aa18.74■□□□□ 0.59
IFT140-201ENST00000361339 BCAMP50895 628 aa18.74■□□□□ 0.59
IFT140-201ENST00000361339 NDUFA8P51970 172 aa18.74■□□□□ 0.59
IFT140-201ENST00000361339 EVCP57679 992 aa18.74■□□□□ 0.59
IFT140-201ENST00000361339 MAGEB6Q8N7X4 407 aa18.74■□□□□ 0.59
IFT140-201ENST00000361339 LRP6O75581 1613 aa18.74■□□□□ 0.59
IFT140-201ENST00000361339 TCRBV5S4A2TA0A5A2 114 aa18.73■□□□□ 0.59
IFT140-201ENST00000361339 CPLX1O14810 134 aa18.73■□□□□ 0.59
IFT140-201ENST00000361339 INTS5Q6P9B9 1019 aaKnown RBP18.73■□□□□ 0.59
IFT140-201ENST00000361339 ZNF34Q8IZ26 560 aa18.73■□□□□ 0.59
IFT140-201ENST00000361339 ZKSCAN3Q9BRR0 538 aa18.73■□□□□ 0.59
IFT140-201ENST00000361339 FBXO3Q9UK99 471 aa18.73■□□□□ 0.59
IFT140-201ENST00000361339 COL4A1P02462 1669 aa18.73■□□□□ 0.59
IFT140-201ENST00000361339 MARCKSP29966 332 aaPredicted RBP18.73■□□□□ 0.59
IFT140-201ENST00000361339 ITPK1Q13572 414 aa18.73■□□□□ 0.59
IFT140-201ENST00000361339 IQCB1Q15051 598 aa18.72■□□□□ 0.59
IFT140-201ENST00000361339 ISM2Q6H9L7 571 aa18.72■□□□□ 0.59
IFT140-201ENST00000361339 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.72■□□□□ 0.59
IFT140-201ENST00000361339 CALCOCO1Q9P1Z2 691 aa18.72■□□□□ 0.59
IFT140-201ENST00000361339 MBD4O95243 580 aa18.72■□□□□ 0.59
IFT140-201ENST00000361339 SYCP1Q15431 976 aa18.72■□□□□ 0.59
IFT140-201ENST00000361339 SYT10Q6XYQ8 523 aa18.72■□□□□ 0.59
IFT140-201ENST00000361339 CCDC73Q6ZRK6 1079 aa18.72■□□□□ 0.59
IFT140-201ENST00000361339 MIGA1Q8NAN2 632 aa18.72■□□□□ 0.59
IFT140-201ENST00000361339 FBXO18Q8NFZ0 1043 aa18.72■□□□□ 0.59
IFT140-201ENST00000361339 TMX1Q9H3N1 280 aa18.72■□□□□ 0.59
IFT140-201ENST00000361339 BIN1O00499 593 aa18.72■□□□□ 0.59
IFT140-201ENST00000361339 SLU7O95391 586 aaKnown RBP18.72■□□□□ 0.59
IFT140-201ENST00000361339 ATP6V1AP38606 617 aa18.72■□□□□ 0.59
IFT140-201ENST00000361339 CRKLP46109 303 aaKnown RBP18.72■□□□□ 0.59
IFT140-201ENST00000361339 CMTR1Q8N1G2 835 aaKnown RBP18.72■□□□□ 0.59
IFT140-201ENST00000361339 LINC00301Q8NCQ3 95 aa18.72■□□□□ 0.59
IFT140-201ENST00000361339 TDRD7Q8NHU6 1098 aaKnown RBP18.72■□□□□ 0.59
IFT140-201ENST00000361339 NUP98P52948 1817 aa18.71■□□□□ 0.59
IFT140-201ENST00000361339 FGFR2P21802 821 aa18.71■□□□□ 0.59
IFT140-201ENST00000361339 CCDC82Q8N4S0 544 aa18.71■□□□□ 0.59
IFT140-201ENST00000361339 STRBPQ96SI9 672 aaKnown RBP18.71■□□□□ 0.59
IFT140-201ENST00000361339 DNAJC5Q9H3Z4 198 aa18.71■□□□□ 0.59
IFT140-201ENST00000361339 ZCCHC17Q9NP64 241 aaKnown RBP18.71■□□□□ 0.59
IFT140-201ENST00000361339 SPEF2Q9C093 1822 aa18.71■□□□□ 0.59
IFT140-201ENST00000361339 KCNQ2O43526 872 aa18.71■□□□□ 0.59
IFT140-201ENST00000361339 SPATA5Q8NB90 893 aa18.71■□□□□ 0.59
IFT140-201ENST00000361339 AIDAQ96BJ3 306 aa18.71■□□□□ 0.59
IFT140-201ENST00000361339 ZNF396Q96N95 335 aaPredicted RBP18.71■□□□□ 0.59
IFT140-201ENST00000361339 EPC1Q9H2F5 836 aa18.71■□□□□ 0.59
IFT140-201ENST00000361339 KINO60870 393 aaKnown RBP18.7■□□□□ 0.58
IFT140-201ENST00000361339 FAM160A1Q05DH4 1040 aa18.7■□□□□ 0.58
IFT140-201ENST00000361339 STK38Q15208 465 aa18.7■□□□□ 0.58
IFT140-201ENST00000361339 RRP12Q5JTH9 1297 aaKnown RBP18.7■□□□□ 0.58
IFT140-201ENST00000361339 FAM177A1Q8N128 213 aaPredicted RBP18.7■□□□□ 0.58
IFT140-201ENST00000361339 IL6STP40189 918 aaPredicted RBP18.7■□□□□ 0.58
IFT140-201ENST00000361339 EIF5P55010 431 aaKnown RBP18.7■□□□□ 0.58
IFT140-201ENST00000361339 PUM3Q15397 648 aaKnown RBP18.7■□□□□ 0.58
IFT140-201ENST00000361339 LRRFIP1Q32MZ4 808 aaKnown RBP18.7■□□□□ 0.58
IFT140-201ENST00000361339 MYSM1Q5VVJ2 828 aa18.7■□□□□ 0.58
IFT140-201ENST00000361339 C3orf67Q6ZVT6 689 aa18.7■□□□□ 0.58
IFT140-201ENST00000361339 FMR1NBQ8N0W7 255 aaPredicted RBP18.7■□□□□ 0.58
IFT140-201ENST00000361339 ERO1AQ96HE7 468 aa18.7■□□□□ 0.58
IFT140-201ENST00000361339 MYH15Q9Y2K3 1946 aa18.7■□□□□ 0.58
IFT140-201ENST00000361339 SH2B2O14492 632 aaPredicted RBP18.69■□□□□ 0.58
IFT140-201ENST00000361339 RANBP6O60518 1105 aaKnown RBP18.69■□□□□ 0.58
IFT140-201ENST00000361339 ARID4AP29374 1257 aaPredicted RBP18.69■□□□□ 0.58
IFT140-201ENST00000361339 WDHD1O75717 1129 aaPredicted RBP18.69■□□□□ 0.58
IFT140-201ENST00000361339 TNNT3P45378 269 aaPredicted RBP18.69■□□□□ 0.58
IFT140-201ENST00000361339 KIF23Q02241 960 aaPredicted RBP18.69■□□□□ 0.58
IFT140-201ENST00000361339 SF3A1Q15459 793 aaKnown RBP18.69■□□□□ 0.58
IFT140-201ENST00000361339 ARHGAP29Q52LW3 1261 aa18.69■□□□□ 0.58
IFT140-201ENST00000361339 HOMER1Q86YM7 354 aa18.69■□□□□ 0.58
IFT140-201ENST00000361339 LCORLQ8N3X6 602 aa18.69■□□□□ 0.58
IFT140-201ENST00000361339 ANGEL1Q9UNK9 670 aaKnown RBP18.69■□□□□ 0.58
IFT140-201ENST00000361339 MROH7-TTC4A0A0A0MT08 1334 aa18.69■□□□□ 0.58
IFT140-201ENST00000361339 NHSL1Q5SYE7 1610 aa18.69■□□□□ 0.58
IFT140-201ENST00000361339 NUTM2BA6NNL0 878 aaPredicted RBP18.69■□□□□ 0.58
IFT140-201ENST00000361339 NUTM2EB1AL46 878 aaPredicted RBP18.69■□□□□ 0.58
IFT140-201ENST00000361339 SEC31AO94979 1220 aaKnown RBP18.69■□□□□ 0.58
IFT140-201ENST00000361339 METAP2P50579 478 aaKnown RBP eCLIP18.69■□□□□ 0.58
IFT140-201ENST00000361339 TRDNQ13061 729 aa18.69■□□□□ 0.58
IFT140-201ENST00000361339 APOA5Q6Q788 366 aa18.69■□□□□ 0.58
IFT140-201ENST00000361339 NUTM2AQ8IVF1 878 aaPredicted RBP18.69■□□□□ 0.58
IFT140-201ENST00000361339 DHX40Q8IX18 779 aaKnown RBP18.69■□□□□ 0.58
IFT140-201ENST00000361339 MARCH10Q8NA82 808 aaPredicted RBP18.69■□□□□ 0.58
IFT140-201ENST00000361339 LPIN2Q92539 896 aa18.69■□□□□ 0.58
IFT140-201ENST00000361339 MPHOSPH8Q99549 860 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms