RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 SLC9C2Q5TAH2 1124 aa29.44■■■□□ 2.3
ALKAL1-201ENST00000358543 FKBP1CQ5VVH2 108 aa29.44■■■□□ 2.3
ALKAL1-201ENST00000358543 CDC42EP5Q6NZY7 148 aa29.44■■■□□ 2.3
ALKAL1-201ENST00000358543 USP48Q86UV5 1035 aa29.44■■■□□ 2.3
ALKAL1-201ENST00000358543 KBTBD3Q8NAB2 608 aa29.44■■■□□ 2.3
ALKAL1-201ENST00000358543 GLIS2Q9BZE0 524 aaPredicted RBP29.44■■■□□ 2.3
ALKAL1-201ENST00000358543 PASKQ96RG2 1323 aa29.44■■■□□ 2.3
ALKAL1-201ENST00000358543 CYP7A1P22680 504 aa29.43■■■□□ 2.3
ALKAL1-201ENST00000358543 BTDP43251 543 aa29.43■■■□□ 2.3
ALKAL1-201ENST00000358543 PPP4CP60510 307 aa29.43■■■□□ 2.3
ALKAL1-201ENST00000358543 C1QTNF8P60827 252 aa29.43■■■□□ 2.3
ALKAL1-201ENST00000358543 USP40Q9NVE5 1235 aa29.43■■■□□ 2.3
ALKAL1-201ENST00000358543 BAG3O95817 575 aa29.42■■■□□ 2.3
ALKAL1-201ENST00000358543 PDE6AP16499 860 aa29.42■■■□□ 2.3
ALKAL1-201ENST00000358543 TNFAIP1Q13829 316 aa29.42■■■□□ 2.3
ALKAL1-201ENST00000358543 ZSCAN25Q6NSZ9 544 aa29.42■■■□□ 2.3
ALKAL1-201ENST00000358543 ADGRA1Q86SQ6 560 aa29.42■■■□□ 2.3
ALKAL1-201ENST00000358543 VEZTQ9HBM0 779 aa29.42■■■□□ 2.3
ALKAL1-201ENST00000358543 TMOD2Q9NZR1 351 aa29.42■■■□□ 2.3
ALKAL1-201ENST00000358543 NOL10Q9BSC4 688 aaKnown RBP29.41■■■□□ 2.3
ALKAL1-201ENST00000358543 PPP2R3BQ9Y5P8 575 aa29.41■■■□□ 2.3
ALKAL1-201ENST00000358543 TCRBV5S4A2TA0A5A2 114 aa29.4■■■□□ 2.3
ALKAL1-201ENST00000358543 ADM5C9JUS6 153 aa29.4■■■□□ 2.3
ALKAL1-201ENST00000358543 ADD2P35612 726 aa29.4■■■□□ 2.3
ALKAL1-201ENST00000358543 UBE3CQ15386 1083 aa29.4■■■□□ 2.3
ALKAL1-201ENST00000358543 CERS3Q8IU89 383 aa29.4■■■□□ 2.3
ALKAL1-201ENST00000358543 EVI5LQ96CN4 794 aa29.4■■■□□ 2.3
ALKAL1-201ENST00000358543 DEFB129Q9H1M3 183 aa29.4■■■□□ 2.3
ALKAL1-201ENST00000358543 RHBDL3P58872 404 aa29.39■■■□□ 2.3
ALKAL1-201ENST00000358543 LRRFIP1Q32MZ4 808 aaKnown RBP29.39■■■□□ 2.3
ALKAL1-201ENST00000358543 TICAM2Q86XR7 235 aa29.39■■■□□ 2.3
ALKAL1-201ENST00000358543 ZNF532Q9HCE3 1301 aa29.39■■■□□ 2.3
ALKAL1-201ENST00000358543 TRAF5O00463 557 aa29.38■■■□□ 2.29
ALKAL1-201ENST00000358543 PLCG2P16885 1265 aa29.38■■■□□ 2.29
ALKAL1-201ENST00000358543 TNNI2P48788 182 aa29.38■■■□□ 2.29
ALKAL1-201ENST00000358543 FAM83AQ86UY5 434 aa29.38■■■□□ 2.29
ALKAL1-201ENST00000358543 IDI2Q9BXS1 227 aa29.38■■■□□ 2.29
ALKAL1-201ENST00000358543 AATFQ9NY61 560 aaKnown RBP eCLIP29.38■■■□□ 2.29
ALKAL1-201ENST00000358543 ZFYP08048 801 aaPredicted RBP29.37■■■□□ 2.29
ALKAL1-201ENST00000358543 SCAF8Q9UPN6 1271 aaKnown RBP29.37■■■□□ 2.29
ALKAL1-201ENST00000358543 TCP10L2B9ZVM9 353 aa29.36■■■□□ 2.29
ALKAL1-201ENST00000358543 NPM3O75607 178 aaKnown RBP29.36■■■□□ 2.29
ALKAL1-201ENST00000358543 CACNB3P54284 484 aa29.36■■■□□ 2.29
ALKAL1-201ENST00000358543 RASA3Q14644 834 aa29.36■■■□□ 2.29
ALKAL1-201ENST00000358543 RNF113AO15541 343 aaKnown RBP29.35■■■□□ 2.29
ALKAL1-201ENST00000358543 WDHD1O75717 1129 aaPredicted RBP29.35■■■□□ 2.29
ALKAL1-201ENST00000358543 CDCA5Q96FF9 252 aa29.35■■■□□ 2.29
ALKAL1-201ENST00000358543 FSD1Q9BTV5 496 aa29.35■■■□□ 2.29
ALKAL1-201ENST00000358543 MYH7P12883 1935 aa29.35■■■□□ 2.29
ALKAL1-201ENST00000358543 NFIAQ12857 509 aa29.34■■■□□ 2.29
ALKAL1-201ENST00000358543 DLK2Q6UY11 383 aa29.34■■■□□ 2.29
ALKAL1-201ENST00000358543 RIOK1Q9BRS2 568 aaKnown RBP29.34■■■□□ 2.29
ALKAL1-201ENST00000358543 ENTPD3O75355 529 aa29.33■■■□□ 2.29
ALKAL1-201ENST00000358543 FMR1Q06787 632 aaKnown RBP eCLIP29.33■■■□□ 2.29
ALKAL1-201ENST00000358543 MIGA1Q8NAN2 632 aa29.33■■■□□ 2.29
ALKAL1-201ENST00000358543 SH3RF3Q8TEJ3 882 aaPredicted RBP29.33■■■□□ 2.29
ALKAL1-201ENST00000358543 FAM151AQ8WW52 585 aa29.33■■■□□ 2.29
ALKAL1-201ENST00000358543 FAM198AQ9UFP1 575 aa29.33■■■□□ 2.29
ALKAL1-201ENST00000358543 CNTNAP1P78357 1384 aa29.33■■■□□ 2.29
ALKAL1-201ENST00000358543 RFX7Q2KHR2 1363 aa29.33■■■□□ 2.29
ALKAL1-201ENST00000358543 MAGEB6P1A0A0J9YX57 407 aa29.32■■■□□ 2.28
ALKAL1-201ENST00000358543 TRIM6-TRIM34B2RNG4 842 aa29.32■■■□□ 2.28
ALKAL1-201ENST00000358543 APLP1P51693 650 aa29.32■■■□□ 2.28
ALKAL1-201ENST00000358543 DYNLL1P63167 89 aaKnown RBP29.32■■■□□ 2.28
ALKAL1-201ENST00000358543 TTC22Q5TAA0 569 aa29.32■■■□□ 2.28
ALKAL1-201ENST00000358543 TEX11Q8IYF3 940 aa29.32■■■□□ 2.28
ALKAL1-201ENST00000358543 CST9Q5W186 159 aa29.31■■■□□ 2.28
ALKAL1-201ENST00000358543 TEPSINQ96N21 525 aa29.31■■■□□ 2.28
ALKAL1-201ENST00000358543 TRPM7Q96QT4 1865 aa29.3■■■□□ 2.28
ALKAL1-201ENST00000358543 CELF2O95319 508 aaKnown RBP29.3■■■□□ 2.28
ALKAL1-201ENST00000358543 CHGBP05060 677 aa29.3■■■□□ 2.28
ALKAL1-201ENST00000358543 RGS3P49796 1198 aa29.3■■■□□ 2.28
ALKAL1-201ENST00000358543 SUPT20HL1Q3ZLR7 823 aa29.3■■■□□ 2.28
ALKAL1-201ENST00000358543 SLFNL1Q499Z3 407 aa29.3■■■□□ 2.28
ALKAL1-201ENST00000358543 PRAMEF18Q5VWM3 479 aa29.3■■■□□ 2.28
ALKAL1-201ENST00000358543 APPBP2Q92624 585 aa29.3■■■□□ 2.28
ALKAL1-201ENST00000358543 TMEM39BQ9GZU3 492 aa29.3■■■□□ 2.28
ALKAL1-201ENST00000358543 RPAP1Q9BWH6 1393 aaPredicted RBP29.29■■■□□ 2.28
ALKAL1-201ENST00000358543 RILPL2Q969X0 211 aa29.29■■■□□ 2.28
ALKAL1-201ENST00000358543 TMEM88BA6NKF7 163 aa29.28■■■□□ 2.28
ALKAL1-201ENST00000358543 HSPA6P17066 643 aa29.28■■■□□ 2.28
ALKAL1-201ENST00000358543 NF2P35240 595 aa29.28■■■□□ 2.28
ALKAL1-201ENST00000358543 TCP10Q12799 353 aa29.28■■■□□ 2.28
ALKAL1-201ENST00000358543 PUS7LQ9H0K6 701 aaKnown RBP29.28■■■□□ 2.28
ALKAL1-201ENST00000358543 DDX4Q9NQI0 724 aaKnown RBP29.28■■■□□ 2.28
ALKAL1-201ENST00000358543 GSPT1P15170 499 aaKnown RBP29.27■■■□□ 2.28
ALKAL1-201ENST00000358543 NBPF12Q5TAG4 269 aaPredicted RBP29.27■■■□□ 2.28
ALKAL1-201ENST00000358543 TGFBRAP1Q8WUH2 860 aa29.27■■■□□ 2.28
ALKAL1-201ENST00000358543 FKBP1BP68106 108 aa29.26■■■□□ 2.27
ALKAL1-201ENST00000358543 PICALMQ13492 652 aa29.26■■■□□ 2.27
ALKAL1-201ENST00000358543 ZMYM1Q5SVZ6 1142 aa29.26■■■□□ 2.27
ALKAL1-201ENST00000358543 ZFPM1Q8IX07 1006 aa29.26■■■□□ 2.27
ALKAL1-201ENST00000358543 LCORLQ8N3X6 602 aa29.26■■■□□ 2.27
ALKAL1-201ENST00000358543 OSBP2Q969R2 916 aa29.26■■■□□ 2.27
ALKAL1-201ENST00000358543 AIDAQ96BJ3 306 aa29.26■■■□□ 2.27
ALKAL1-201ENST00000358543 ZNF408Q9H9D4 720 aa29.26■■■□□ 2.27
ALKAL1-201ENST00000358543 CREBZFQ9NS37 354 aa29.26■■■□□ 2.27
ALKAL1-201ENST00000358543 HOOK2Q96ED9 719 aa29.25■■■□□ 2.27
ALKAL1-201ENST00000358543 CRNKL1Q9BZJ0 848 aaKnown RBP29.25■■■□□ 2.27
ALKAL1-201ENST00000358543 MBD4O95243 580 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms