RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 A0A1B0GUL7 405 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 C8orf34Q49A92 452 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 CCDC62Q6P9F0 684 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 ANKRD42Q8N9B4 389 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 CHPF2Q9P2E5 772 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 INPP5BP32019 993 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 IL1RL1Q01638 556 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 MCMDC2Q4G0Z9 681 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 C8orf74Q6P047 294 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 DCLK2Q8N568 766 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 UTP11Q9Y3A2 253 aaKnown RBP13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 NOD1Q9Y239 953 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 FOXD4Q12950 439 aaPredicted RBP13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 TAB3Q8N5C8 712 aaPredicted RBP13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 MEIS3Q99687 375 aa13.93□□□□□ -0.18
ARFGEF1-201ENST00000262215 CETN3O15182 167 aa13.92□□□□□ -0.18
ARFGEF1-201ENST00000262215 UQCRFS1P1P0C7P4 283 aa13.92□□□□□ -0.18
ARFGEF1-201ENST00000262215 XAB2Q9HCS7 855 aaKnown RBP13.92□□□□□ -0.18
ARFGEF1-201ENST00000262215 NXNQ6DKJ4 435 aa13.92□□□□□ -0.18
ARFGEF1-201ENST00000262215 C4orf50Q6ZRC1 276 aa13.92□□□□□ -0.18
ARFGEF1-201ENST00000262215 CAPN12Q6ZSI9 719 aa13.92□□□□□ -0.18
ARFGEF1-201ENST00000262215 TSC1Q92574 1164 aa13.92□□□□□ -0.18
ARFGEF1-201ENST00000262215 BAIAP2L1Q9UHR4 511 aa13.92□□□□□ -0.18
ARFGEF1-201ENST00000262215 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.92□□□□□ -0.18
ARFGEF1-201ENST00000262215 CAVIN2O95810 425 aa13.92□□□□□ -0.18
ARFGEF1-201ENST00000262215 ANKRD13DQ6ZTN6 518 aa13.92□□□□□ -0.18
ARFGEF1-201ENST00000262215 SETDB2Q96T68 719 aa13.92□□□□□ -0.18
ARFGEF1-201ENST00000262215 MYO1AQ9UBC5 1043 aa13.92□□□□□ -0.18
ARFGEF1-201ENST00000262215 SPDYE16A6NNV3 312 aaPredicted RBP13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 SESN3P58005 492 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 SPDYE2Q495Y8 402 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 BZW2Q9Y6E2 419 aaKnown RBP13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 GOLGA6CA6NDK9 693 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 AKR1B15C9JRZ8 316 aaPredicted RBP13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 GOLGA6DP0CG33 693 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 CPA1P15085 419 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 KRT15P19012 456 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 MRPL46Q9H2W6 279 aaKnown RBP13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 MBIPQ9NS73 344 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 GOLGA6AQ9NYA3 693 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 SPECC1L-ADORA2AF8WAN1 911 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 BAG2O95816 211 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 BMP15O95972 392 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 FRMD3A2A2Y4 597 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 KRT19P08727 400 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 EPB41P11171 864 aaKnown RBP13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 ATP6V1AP38606 617 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 PRKG1Q13976 671 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 CNNM2Q9H8M5 875 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 LMBR1LQ6UX01 489 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 ZGPATQ8N5A5 531 aaKnown RBP13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 TBC1D8O95759 1140 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 TBC1D8BQ0IIM8 1120 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 TRPC3Q13507 836 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 USH1CQ9Y6N9 552 aa13.91□□□□□ -0.18
ARFGEF1-201ENST00000262215 MGEA5O60502 916 aa13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 TSTA3Q13630 321 aaPredicted RBP13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 RBBP5Q15291 538 aaKnown RBP13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 PDCD7Q8N8D1 485 aaKnown RBP13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 XAGE3Q8WTP9 111 aa13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 RIOK3O14730 519 aaKnown RBP13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 CARD6Q9BX69 1037 aa13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 SMARCA2P51531 1590 aa13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 PDE4DQ08499 809 aa13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 TMTC2Q8N394 836 aa13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 NSFL1CQ9UNZ2 370 aaKnown RBP13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 ARHGAP42A6NI28 874 aa13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 CEP104O60308 925 aa13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 SAT1P21673 171 aa13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 ATP5DP30049 168 aa13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 BMP2KLQ5H9B9 411 aa13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 HINFPQ9BQA5 517 aa13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 PPP4R4Q6NUP7 873 aa13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 IGSF22Q8N9C0 903 aa13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 TPX2Q9ULW0 747 aaKnown RBP13.9□□□□□ -0.18
ARFGEF1-201ENST00000262215 MYCLP12524 364 aaPredicted RBP13.9□□□□□ -0.19
ARFGEF1-201ENST00000262215 NIP7Q9Y221 180 aaKnown RBP eCLIP13.9□□□□□ -0.19
ARFGEF1-201ENST00000262215 SORBS3O60504 671 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 COPS6Q7L5N1 327 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 TSPYL2Q9H2G4 693 aaPredicted RBP13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 PTPDC1A2A3K4 754 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 SLC8A3P57103 927 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 COG7P83436 770 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 TMTC4Q5T4D3 741 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 KIFAP3Q92845 792 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 TSGA10Q9BZW7 698 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 GJA3Q9Y6H8 435 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 OPHN1O60890 802 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 ABL1P00519 1130 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 GNAQP50148 359 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 PPP2R5AQ15172 486 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 SV2BQ7L1I2 683 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 VPS37BQ9H9H4 285 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 CACYBPQ9HB71 228 aaKnown RBP13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 KIF21BO75037 1637 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 GNL1P36915 607 aaPredicted RBP13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 AK2P54819 239 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 LRMPQ12912 555 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 KIF22Q14807 665 aa13.89□□□□□ -0.19
ARFGEF1-201ENST00000262215 TSNAXIP1Q2TAA8 658 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms