RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 STAP2Q9UGK3 403 aa16.94■□□□□ 0.3
KCTD3-201ENST00000259154 GPTP24298 496 aa16.94■□□□□ 0.3
KCTD3-201ENST00000259154 EPS15P42566 896 aa16.94■□□□□ 0.3
KCTD3-201ENST00000259154 MRPS25P82663 173 aaKnown RBP16.94■□□□□ 0.3
KCTD3-201ENST00000259154 MAATS1Q7Z4T9 603 aa16.94■□□□□ 0.3
KCTD3-201ENST00000259154 SUCLG2Q96I99 432 aa16.94■□□□□ 0.3
KCTD3-201ENST00000259154 CLIC6Q96NY7 704 aa16.94■□□□□ 0.3
KCTD3-201ENST00000259154 FANCLQ9NW38 375 aa16.94■□□□□ 0.3
KCTD3-201ENST00000259154 PXDNQ92626 1479 aa16.94■□□□□ 0.3
KCTD3-201ENST00000259154 USP8P40818 1118 aa16.94■□□□□ 0.3
KCTD3-201ENST00000259154 TMEM67Q5HYA8 995 aa16.94■□□□□ 0.3
KCTD3-201ENST00000259154 SLC12A7Q9Y666 1083 aa16.94■□□□□ 0.3
KCTD3-201ENST00000259154 TDRD12Q587J7 1177 aaKnown RBP16.93■□□□□ 0.3
KCTD3-201ENST00000259154 METTL24Q5JXM2 366 aa16.93■□□□□ 0.3
KCTD3-201ENST00000259154 HGSO14964 777 aaPredicted RBP16.93■□□□□ 0.3
KCTD3-201ENST00000259154 IVLP07476 585 aa16.93■□□□□ 0.3
KCTD3-201ENST00000259154 HMGB1P09429 215 aaKnown RBP16.93■□□□□ 0.3
KCTD3-201ENST00000259154 IFNL2Q8IZJ0 200 aa16.93■□□□□ 0.3
KCTD3-201ENST00000259154 MACROD2A1Z1Q3 448 aa16.93■□□□□ 0.3
KCTD3-201ENST00000259154 CDKL5O76039 1030 aa16.93■□□□□ 0.3
KCTD3-201ENST00000259154 RAD51AP2Q09MP3 1159 aa16.93■□□□□ 0.3
KCTD3-201ENST00000259154 POLA2Q14181 598 aa16.93■□□□□ 0.3
KCTD3-201ENST00000259154 AKAP4Q5JQC9 854 aa16.93■□□□□ 0.3
KCTD3-201ENST00000259154 KIF6Q6ZMV9 814 aa16.93■□□□□ 0.3
KCTD3-201ENST00000259154 PGBD1Q96JS3 809 aa16.93■□□□□ 0.3
KCTD3-201ENST00000259154 EBAG9O00559 213 aa16.92■□□□□ 0.3
KCTD3-201ENST00000259154 ST5P78524 1137 aa16.92■□□□□ 0.3
KCTD3-201ENST00000259154 TDRD7Q8NHU6 1098 aaKnown RBP16.92■□□□□ 0.3
KCTD3-201ENST00000259154 GPHNQ9NQX3 736 aaPredicted RBP16.92■□□□□ 0.3
KCTD3-201ENST00000259154 PCDHA7Q9UN72 937 aa16.92■□□□□ 0.3
KCTD3-201ENST00000259154 RGPD2P0DJD1 1756 aa16.92■□□□□ 0.3
KCTD3-201ENST00000259154 CMTR1Q8N1G2 835 aaKnown RBP16.92■□□□□ 0.3
KCTD3-201ENST00000259154 KAZALD1Q96I82 304 aa16.92■□□□□ 0.3
KCTD3-201ENST00000259154 KIAA1468Q9P260 1216 aa16.92■□□□□ 0.3
KCTD3-201ENST00000259154 MAP9Q49MG5 647 aa16.92■□□□□ 0.3
KCTD3-201ENST00000259154 EPHA10Q5JZY3 1008 aa16.92■□□□□ 0.3
KCTD3-201ENST00000259154 NBPF11Q86T75 865 aa16.92■□□□□ 0.3
KCTD3-201ENST00000259154 NAPBQ9H115 298 aa16.92■□□□□ 0.3
KCTD3-201ENST00000259154 ZSWIM6Q9HCJ5 1215 aa16.92■□□□□ 0.3
KCTD3-201ENST00000259154 CLIC4Q9Y696 253 aa16.92■□□□□ 0.3
KCTD3-201ENST00000259154 A0A1B0GUL7 405 aa16.91■□□□□ 0.3
KCTD3-201ENST00000259154 TXLNAP40222 546 aa16.91■□□□□ 0.3
KCTD3-201ENST00000259154 RRAGBQ5VZM2 374 aa16.91■□□□□ 0.3
KCTD3-201ENST00000259154 RGS22Q8NE09 1264 aa16.91■□□□□ 0.3
KCTD3-201ENST00000259154 SLF1Q9BQI6 1058 aa16.91■□□□□ 0.3
KCTD3-201ENST00000259154 POLR2DO15514 142 aaKnown RBP16.91■□□□□ 0.3
KCTD3-201ENST00000259154 RNMTO43148 476 aaKnown RBP16.91■□□□□ 0.3
KCTD3-201ENST00000259154 ZPR1O75312 459 aa16.91■□□□□ 0.3
KCTD3-201ENST00000259154 HDXQ7Z353 690 aa16.91■□□□□ 0.3
KCTD3-201ENST00000259154 IGSF22Q8N9C0 903 aa16.91■□□□□ 0.3
KCTD3-201ENST00000259154 IFT81Q8WYA0 676 aa16.91■□□□□ 0.3
KCTD3-201ENST00000259154 FAN1Q9Y2M0 1017 aa16.91■□□□□ 0.3
KCTD3-201ENST00000259154 PHRF1Q9P1Y6 1649 aaKnown RBP16.91■□□□□ 0.3
KCTD3-201ENST00000259154 RANBP6O60518 1105 aaKnown RBP16.9■□□□□ 0.3
KCTD3-201ENST00000259154 ARID5AQ03989 594 aa16.9■□□□□ 0.3
KCTD3-201ENST00000259154 FBXO3Q9UK99 471 aa16.9■□□□□ 0.3
KCTD3-201ENST00000259154 GIGYF1O75420 1035 aaPredicted RBP16.9■□□□□ 0.3
KCTD3-201ENST00000259154 SASH1O94885 1247 aa16.9■□□□□ 0.3
KCTD3-201ENST00000259154 YEATS4O95619 227 aa16.9■□□□□ 0.3
KCTD3-201ENST00000259154 TRIM21P19474 475 aaKnown RBP16.9■□□□□ 0.3
KCTD3-201ENST00000259154 SPA17Q15506 151 aa16.9■□□□□ 0.3
KCTD3-201ENST00000259154 ANKRD13DQ6ZTN6 518 aa16.9■□□□□ 0.3
KCTD3-201ENST00000259154 ZNF594Q96JF6 807 aaPredicted RBP16.9■□□□□ 0.3
KCTD3-201ENST00000259154 SCLT1Q96NL6 688 aa16.9■□□□□ 0.3
KCTD3-201ENST00000259154 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.9■□□□□ 0.31e-6■■□□□ 13.6
KCTD3-201ENST00000259154 RRP15Q9Y3B9 282 aaKnown RBP16.9■□□□□ 0.3
KCTD3-201ENST00000259154 RPAP1Q9BWH6 1393 aaPredicted RBP16.9■□□□□ 0.3
KCTD3-201ENST00000259154 TTC41PQ6P2S7 1318 aa16.9■□□□□ 0.3
KCTD3-201ENST00000259154 MYO1CO00159 1063 aa16.9■□□□□ 0.3
KCTD3-201ENST00000259154 POLD4Q9HCU8 107 aa16.9■□□□□ 0.3
KCTD3-201ENST00000259154 SSRP1Q08945 709 aaKnown RBP16.89■□□□□ 0.29
KCTD3-201ENST00000259154 SCRN1Q12765 414 aa16.89■□□□□ 0.29
KCTD3-201ENST00000259154 CCDC96Q2M329 555 aa16.89■□□□□ 0.29
KCTD3-201ENST00000259154 PPP2R2CQ9Y2T4 447 aa16.89■□□□□ 0.29
KCTD3-201ENST00000259154 GOLGA6L7A0A1B0GV03 622 aa16.89■□□□□ 0.29
KCTD3-201ENST00000259154 GOLGA6L9A6NEM1 432 aa16.89■□□□□ 0.29
KCTD3-201ENST00000259154 ENC1O14682 589 aa16.89■□□□□ 0.29
KCTD3-201ENST00000259154 HPDP32754 393 aaPredicted RBP16.89■□□□□ 0.29
KCTD3-201ENST00000259154 MRFAP1L1Q96HT8 127 aa16.89■□□□□ 0.29
KCTD3-201ENST00000259154 IRX2Q9BZI1 471 aaPredicted RBP16.89■□□□□ 0.29
KCTD3-201ENST00000259154 FAM208AQ9UK61 1670 aaKnown RBP16.89■□□□□ 0.29
KCTD3-201ENST00000259154 ST3GAL1Q11201 340 aa16.89■□□□□ 0.29
KCTD3-201ENST00000259154 ANO1Q5XXA6 986 aa16.89■□□□□ 0.29
KCTD3-201ENST00000259154 CADPS2Q86UW7 1296 aa16.89■□□□□ 0.29
KCTD3-201ENST00000259154 OTUD6BQ8N6M0 293 aa16.89■□□□□ 0.29
KCTD3-201ENST00000259154 HELBQ8NG08 1087 aaPredicted RBP16.89■□□□□ 0.29
KCTD3-201ENST00000259154 LRP2BPQ9P2M1 347 aa16.89■□□□□ 0.29
KCTD3-201ENST00000259154 ADAMTS2O95450 1211 aa16.88■□□□□ 0.29
KCTD3-201ENST00000259154 KSR2Q6VAB6 950 aa16.88■□□□□ 0.29
KCTD3-201ENST00000259154 NCOA7Q8NI08 942 aa16.88■□□□□ 0.29
KCTD3-201ENST00000259154 SEPT11Q9NVA2 429 aaKnown RBP16.88■□□□□ 0.29
KCTD3-201ENST00000259154 MTIF2P46199 727 aaKnown RBP16.88■□□□□ 0.29
KCTD3-201ENST00000259154 PARD6BQ9BYG5 372 aa16.88■□□□□ 0.29
KCTD3-201ENST00000259154 C19orf44Q9H6X5 657 aa16.88■□□□□ 0.29
KCTD3-201ENST00000259154 PAG1Q9NWQ8 432 aa16.88■□□□□ 0.29
KCTD3-201ENST00000259154 SLFN14P0C7P3 912 aa16.88■□□□□ 0.29
KCTD3-201ENST00000259154 PFKFB1P16118 471 aa16.88■□□□□ 0.29
KCTD3-201ENST00000259154 ADD1P35611 737 aaKnown RBP16.88■□□□□ 0.29
KCTD3-201ENST00000259154 PTPROQ16827 1216 aa16.88■□□□□ 0.29
KCTD3-201ENST00000259154 LONRF2Q1L5Z9 754 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms