RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 C7orf66A4D0T2 115 aa17.44■□□□□ 0.38
SSX2IP-209ENST00000603677 C5orf51A6NDU8 294 aa17.44■□□□□ 0.38
SSX2IP-209ENST00000603677 L7N2F9 121 aa17.44■□□□□ 0.38
SSX2IP-209ENST00000603677 PRAF2O60831 178 aa17.44■□□□□ 0.38
SSX2IP-209ENST00000603677 ZNF688P0C7X2 276 aa17.44■□□□□ 0.38
SSX2IP-209ENST00000603677 PVALBP20472 110 aaPredicted RBP17.44■□□□□ 0.38
SSX2IP-209ENST00000603677 ID1P41134 155 aa17.44■□□□□ 0.38
SSX2IP-209ENST00000603677 PLP1P60201 277 aa17.44■□□□□ 0.38
SSX2IP-209ENST00000603677 VAMP2P63027 116 aa17.44■□□□□ 0.38
SSX2IP-209ENST00000603677 ZNF124Q15973 351 aa17.44■□□□□ 0.38
SSX2IP-209ENST00000603677 LEMD1Q68G75 181 aa17.44■□□□□ 0.38
SSX2IP-209ENST00000603677 GSG1LQ6UXU4 331 aa17.44■□□□□ 0.38
SSX2IP-209ENST00000603677 TRPT1Q86TN4 253 aaKnown RBP17.44■□□□□ 0.38
SSX2IP-209ENST00000603677 PPP1R14BQ96C90 147 aa17.44■□□□□ 0.38
SSX2IP-209ENST00000603677 KMT2CQ8NEZ4 4911 aaKnown RBP17.43■□□□□ 0.38
SSX2IP-209ENST00000603677 DEDDO75618 318 aa17.43■□□□□ 0.38
SSX2IP-209ENST00000603677 OR2F1Q13607 317 aa17.43■□□□□ 0.38
SSX2IP-209ENST00000603677 PXDC1Q5TGL8 231 aa17.43■□□□□ 0.38
SSX2IP-209ENST00000603677 TEPPQ6URK8 271 aa17.43■□□□□ 0.38
SSX2IP-209ENST00000603677 OR8I2Q8N0Y5 310 aa17.43■□□□□ 0.38
SSX2IP-209ENST00000603677 SEC22CQ9BRL7 303 aa17.43■□□□□ 0.38
SSX2IP-209ENST00000603677 METTL15P1P0C7V9 234 aa17.42■□□□□ 0.38
SSX2IP-209ENST00000603677 DEFA1P59665 94 aa17.42■□□□□ 0.38
SSX2IP-209ENST00000603677 DEFA3P59666 94 aa17.42■□□□□ 0.38
SSX2IP-209ENST00000603677 NUTF2P61970 127 aaKnown RBP17.42■□□□□ 0.38
SSX2IP-209ENST00000603677 SPATA31B1PQ5VZV4 182 aa17.42■□□□□ 0.38
SSX2IP-209ENST00000603677 CYP2G1PQ6ZSU1 146 aa17.42■□□□□ 0.38
SSX2IP-209ENST00000603677 TMEM147Q9BVK8 224 aa17.42■□□□□ 0.38
SSX2IP-209ENST00000603677 FAM25EA8MYX2 175 aa17.41■□□□□ 0.38
SSX2IP-209ENST00000603677 GALR1P47211 349 aa17.41■□□□□ 0.38
SSX2IP-209ENST00000603677 PSMB3P49720 205 aa17.41■□□□□ 0.38
SSX2IP-209ENST00000603677 PSMG4Q5JS54 123 aa17.41■□□□□ 0.38
SSX2IP-209ENST00000603677 SMCO3A2RU48 225 aa17.4■□□□□ 0.38
SSX2IP-209ENST00000603677 ZNF98A6NK75 572 aa17.4■□□□□ 0.38
SSX2IP-209ENST00000603677 ISLRO14498 428 aa17.4■□□□□ 0.38
SSX2IP-209ENST00000603677 CA1P00915 261 aaPredicted RBP17.4■□□□□ 0.38
SSX2IP-209ENST00000603677 IL15RAQ13261 267 aa17.4■□□□□ 0.38
SSX2IP-209ENST00000603677 OR1B1Q8NGR6 318 aa17.4■□□□□ 0.38
SSX2IP-209ENST00000603677 CLUHP3Q96NS8 147 aa17.4■□□□□ 0.38
SSX2IP-209ENST00000603677 RARRES2Q99969 163 aa17.4■□□□□ 0.38
SSX2IP-209ENST00000603677 C1QTNF4Q9BXJ3 329 aa17.4■□□□□ 0.38
SSX2IP-209ENST00000603677 CCSO14618 274 aa17.39■□□□□ 0.37
SSX2IP-209ENST00000603677 RAP2BP61225 183 aa17.39■□□□□ 0.37
SSX2IP-209ENST00000603677 CSMD3Q7Z407 3707 aa17.39■□□□□ 0.37
SSX2IP-209ENST00000603677 ORM2P19652 201 aa17.38■□□□□ 0.37
SSX2IP-209ENST00000603677 ACTL10Q5JWF8 245 aa17.38■□□□□ 0.37
SSX2IP-209ENST00000603677 ZFAND6Q6FIF0 208 aa17.38■□□□□ 0.37
SSX2IP-209ENST00000603677 ZNF546Q86UE3 836 aa17.38■□□□□ 0.37
SSX2IP-209ENST00000603677 MARVELD1Q9BSK0 173 aa17.38■□□□□ 0.37
SSX2IP-209ENST00000603677 C11orf68Q9H3H3 251 aaKnown RBP17.38■□□□□ 0.37
SSX2IP-209ENST00000603677 A0A0J9YWU9 116 aa17.37■□□□□ 0.37
SSX2IP-209ENST00000603677 HYPMO75409 117 aa17.37■□□□□ 0.37
SSX2IP-209ENST00000603677 CYCSP99999 105 aaKnown RBP17.37■□□□□ 0.37
SSX2IP-209ENST00000603677 C11orf1Q9H5F2 150 aa17.37■□□□□ 0.37
SSX2IP-209ENST00000603677 LSM5Q9Y4Y9 91 aaKnown RBP17.37■□□□□ 0.37
SSX2IP-209ENST00000603677 SOCS3O14543 225 aa17.36■□□□□ 0.37
SSX2IP-209ENST00000603677 HLA-DRB4P13762 266 aa17.36■□□□□ 0.37
SSX2IP-209ENST00000603677 RRAS2P62070 204 aaPredicted RBP17.36■□□□□ 0.37
SSX2IP-209ENST00000603677 IFITM3Q01628 133 aa17.36■□□□□ 0.37
SSX2IP-209ENST00000603677 RAB31Q13636 194 aa17.36■□□□□ 0.37
SSX2IP-209ENST00000603677 NRARPQ7Z6K4 114 aa17.36■□□□□ 0.37
SSX2IP-209ENST00000603677 OR11H2Q8NH07 326 aa17.36■□□□□ 0.37
SSX2IP-209ENST00000603677 LYRM2Q9NU23 88 aaPredicted RBP17.36■□□□□ 0.37
SSX2IP-209ENST00000603677 HIGD1AQ9Y241 93 aa17.36■□□□□ 0.37
SSX2IP-209ENST00000603677 HLA-DRB4X5D2U9 266 aa17.36■□□□□ 0.37
SSX2IP-209ENST00000603677 AGRNO00468 2067 aa17.36■□□□□ 0.37
SSX2IP-209ENST00000603677 INMT-MINDY4F8WBC2 141 aa17.35■□□□□ 0.37
SSX2IP-209ENST00000603677 H3BMM0 161 aa17.35■□□□□ 0.37
SSX2IP-209ENST00000603677 LINC00869P0C866 280 aa17.35■□□□□ 0.37
SSX2IP-209ENST00000603677 RPL7P18124 248 aaKnown RBP17.35■□□□□ 0.37
SSX2IP-209ENST00000603677 S100A11P31949 105 aa17.35■□□□□ 0.37
SSX2IP-209ENST00000603677 BCAP31P51572 246 aa17.35■□□□□ 0.37
SSX2IP-209ENST00000603677 CAV2P51636 162 aa17.35■□□□□ 0.37
SSX2IP-209ENST00000603677 TMEM182Q6ZP80 229 aaPredicted RBP17.35■□□□□ 0.37
SSX2IP-209ENST00000603677 FOXI2Q6ZQN5 318 aa17.35■□□□□ 0.37
SSX2IP-209ENST00000603677 SHANK2-AS3Q9BTD1 123 aa17.35■□□□□ 0.37
SSX2IP-209ENST00000603677 SLC25A39Q9BZJ4 359 aaPredicted RBP17.35■□□□□ 0.37
SSX2IP-209ENST00000603677 KNCNA6PVL3 124 aa17.34■□□□□ 0.37
SSX2IP-209ENST00000603677 H3BRN7 92 aa17.34■□□□□ 0.37
SSX2IP-209ENST00000603677 GOSR2O14653 212 aa17.34■□□□□ 0.37
SSX2IP-209ENST00000603677 CCNKO75909 580 aa17.34■□□□□ 0.37
SSX2IP-209ENST00000603677 GATA2P23769 480 aaPredicted RBP17.34■□□□□ 0.37
SSX2IP-209ENST00000603677 HBG1P69891 147 aa17.34■□□□□ 0.37
SSX2IP-209ENST00000603677 HBG2P69892 147 aa17.34■□□□□ 0.37
SSX2IP-209ENST00000603677 NMES1Q9C002 83 aa17.34■□□□□ 0.37
SSX2IP-209ENST00000603677 SAV1Q9H4B6 383 aaPredicted RBP17.34■□□□□ 0.37
SSX2IP-209ENST00000603677 TENM2Q9NT68 2774 aa17.34■□□□□ 0.37
SSX2IP-209ENST00000603677 ELOA3CA0A087WX78 387 aaPredicted RBP17.33■□□□□ 0.36
SSX2IP-209ENST00000603677 RLN2P04090 185 aa17.33■□□□□ 0.36
SSX2IP-209ENST00000603677 SULT1A1P50225 295 aa17.33■□□□□ 0.36
SSX2IP-209ENST00000603677 SLC38A11Q08AI6 406 aa17.33■□□□□ 0.36
SSX2IP-209ENST00000603677 ATP6V1FQ16864 119 aa17.33■□□□□ 0.36
SSX2IP-209ENST00000603677 STX12Q86Y82 276 aa17.33■□□□□ 0.36
SSX2IP-209ENST00000603677 MFFQ9GZY8 342 aa17.33■□□□□ 0.36
SSX2IP-209ENST00000603677 SLC25A32Q9H2D1 315 aa17.33■□□□□ 0.36
SSX2IP-209ENST00000603677 SLC25A22Q9H936 323 aa17.33■□□□□ 0.36
SSX2IP-209ENST00000603677 RPRMQ9NS64 109 aa17.33■□□□□ 0.36
SSX2IP-209ENST00000603677 NUPR2A6NF83 97 aa17.32■□□□□ 0.36
SSX2IP-209ENST00000603677 ZNF705EA8MWA4 302 aaPredicted RBP17.32■□□□□ 0.36
SSX2IP-209ENST00000603677 AGPAT2O15120 278 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms