RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 DENND4CQ5VZ89 1909 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 A0A1B0GW64 132 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 SMAD7O15105 426 aaKnown RBP7.27□□□□□ -1.25
CSMD1-216ENST00000602557 TIAF1O95411 115 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 ZNF114Q8NC26 417 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 YAE1D1Q9NRH1 226 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 PLXNA2O75051 1894 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 TRAV8-3A0A0A6YYJ7 113 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 OSTCQ9NRP0 149 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 PRR19A6NJB7 356 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 NBEAP1P0C6P0 100 aa7.27□□□□□ -1.25
CSMD1-216ENST00000602557 RFPL3SP0C7P2 107 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 PYYP10082 97 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 BSPH1Q075Z2 132 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 ALPK3Q96L96 1907 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 EGR4Q05215 589 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 TNFRSF18Q9Y5U5 241 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 CELA3BP08861 270 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 ASIPP42127 132 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 PLNP26678 52 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 Q6ZT83 130 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 MRPL20Q9BYC9 149 aaKnown RBP7.26□□□□□ -1.25
CSMD1-216ENST00000602557 PRB1P04280 392 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 C3orf56Q8N813 242 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 TMEM54Q969K7 222 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 GFI1Q99684 422 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 IGKV1D-33P01593 117 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 IGKV1-33P01594 117 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 SPATA31B1PQ5VZV4 182 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 DUX3Q96PT4 197 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 IFI27L2Q9H2X8 130 aa7.26□□□□□ -1.25
CSMD1-216ENST00000602557 C12orf77C9JDV5 145 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 CECR9P0C854 216 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 GLRXP35754 106 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 HGFACQ04756 655 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 TRAV13-1A0A0B4J241 112 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 H7C1H1 209 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 PF4P02776 101 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 CENPVQ7Z7K6 275 aaPredicted RBP7.25□□□□□ -1.25
CSMD1-216ENST00000602557 MUC4Q99102 2169 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 RAMP3O60896 148 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 ITLN2Q8WWU7 325 aaPredicted RBP7.25□□□□□ -1.25
CSMD1-216ENST00000602557 PIEZO2Q9H5I5 2752 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 MRPL23Q16540 153 aaKnown RBP7.25□□□□□ -1.25
CSMD1-216ENST00000602557 LINC01551Q86U37 167 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 RS1O15537 224 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 CTHRC1Q96CG8 243 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 CSTL1Q9H114 145 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 LILRA1O75019 489 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 FAM201AQ5SY85 155 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 GAGE12JA6NER3 117 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 B9A039 149 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 GAGE7O76087 117 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 LGALS1P09382 135 aaKnown RBP7.25□□□□□ -1.25
CSMD1-216ENST00000602557 GAGE12FP0CL80 117 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 GAGE12GP0CL81 117 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 GAGE12IP0CL82 117 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 GAGE4Q13068 117 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 TMEM30BQ3MIR4 351 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 CHCHD2Q9Y6H1 151 aaPredicted RBP7.25□□□□□ -1.25
CSMD1-216ENST00000602557 CIARTQ8N365 385 aaPredicted RBP7.25□□□□□ -1.25
CSMD1-216ENST00000602557 SP7Q8TDD2 431 aaPredicted RBP7.25□□□□□ -1.25
CSMD1-216ENST00000602557 SMKR1H3BMG3 65 aa7.25□□□□□ -1.25
CSMD1-216ENST00000602557 CFHR5Q9BXR6 569 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 ZNF703Q9H7S9 590 aaPredicted RBP7.24□□□□□ -1.25
CSMD1-216ENST00000602557 NPIPB13A6NJU9 1138 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 H3BMM0 161 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 PDLIM4P50479 330 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 UBE2WQ96B02 151 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 MESP1Q9BRJ9 268 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 D6R8Y8 96 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 FAM216BQ8N7L0 139 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 IGKV1D-13A0A0B4J2D9 117 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 IGKV1-13P0DP09 117 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 TCF15Q12870 199 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 LAGE3Q14657 143 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 RASL11AQ6T310 242 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 RBMY1BA6NDE4 496 aaKnown RBP7.24□□□□□ -1.25
CSMD1-216ENST00000602557 RBMY1EA6NEQ0 496 aaKnown RBP7.24□□□□□ -1.25
CSMD1-216ENST00000602557 RBMY1DP0C7P1 496 aaKnown RBP7.24□□□□□ -1.25
CSMD1-216ENST00000602557 RBMY1A1P0DJD3 496 aaKnown RBP7.24□□□□□ -1.25
CSMD1-216ENST00000602557 RBMY1CP0DJD4 496 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 MST1LQ2TV78 715 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 FCN3O75636 299 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 HAPLN4Q86UW8 402 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 GATD1Q8NB37 220 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 OR13A1Q8NGR1 328 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 FOXH1O75593 365 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 IGHV2-5P01817 119 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 PPP1R32Q7Z5V6 425 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 TMEM126AQ9H061 195 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 C21orf62Q9NYP8 219 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 PSMG4Q5JS54 123 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 EML5Q05BV3 1969 aa7.24□□□□□ -1.25
CSMD1-216ENST00000602557 PMVKQ15126 192 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 ZNF415Q09FC8 603 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 ATP5IP56385 69 aaPredicted RBP7.23□□□□□ -1.25
CSMD1-216ENST00000602557 NUP35Q8NFH5 326 aa7.23□□□□□ -1.25
CSMD1-216ENST00000602557 PHLDA1Q8WV24 401 aaPredicted RBP7.23□□□□□ -1.25
CSMD1-216ENST00000602557 GLMPQ8WWB7 406 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms