RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 STPG3Q8N7X2 389 aa16.7■□□□□ 0.26
CHMP2A-204ENST00000597848 RNF2Q99496 336 aa16.7■□□□□ 0.26
CHMP2A-204ENST00000597848 U3KQE9 123 aa16.7■□□□□ 0.26
CHMP2A-204ENST00000597848 IZUMO1RA6ND01 250 aa16.69■□□□□ 0.26
CHMP2A-204ENST00000597848 RPL29P47914 159 aaKnown RBP16.69■□□□□ 0.26
CHMP2A-204ENST00000597848 GUCA2BQ16661 112 aa16.69■□□□□ 0.26
CHMP2A-204ENST00000597848 Q6ZRG5 221 aa16.69■□□□□ 0.26
CHMP2A-204ENST00000597848 TMEM61Q8N0U2 210 aa16.69■□□□□ 0.26
CHMP2A-204ENST00000597848 PXMP4Q9Y6I8 212 aa16.69■□□□□ 0.26
CHMP2A-204ENST00000597848 HMSDA8MTL9 139 aa16.68■□□□□ 0.26
CHMP2A-204ENST00000597848 C17orf112F2Z3M2 114 aa16.68■□□□□ 0.26
CHMP2A-204ENST00000597848 S100A7P31151 101 aa16.68■□□□□ 0.26
CHMP2A-204ENST00000597848 PLP1P60201 277 aa16.68■□□□□ 0.26
CHMP2A-204ENST00000597848 B2MP61769 119 aa16.68■□□□□ 0.26
CHMP2A-204ENST00000597848 RPL11P62913 178 aaKnown RBP16.68■□□□□ 0.26
CHMP2A-204ENST00000597848 ZNF266Q14584 549 aa16.68■□□□□ 0.26
CHMP2A-204ENST00000597848 KPRPQ5T749 579 aaPredicted RBP16.68■□□□□ 0.26
CHMP2A-204ENST00000597848 PXDC1Q5TGL8 231 aa16.68■□□□□ 0.26
CHMP2A-204ENST00000597848 TCF24Q7RTU0 167 aa16.68■□□□□ 0.26
CHMP2A-204ENST00000597848 SLC39A9Q9NUM3 307 aa16.68■□□□□ 0.26
CHMP2A-204ENST00000597848 HIGD1AQ9Y241 93 aa16.68■□□□□ 0.26
CHMP2A-204ENST00000597848 ZNF256Q9Y2P7 627 aaPredicted RBP16.68■□□□□ 0.26
CHMP2A-204ENST00000597848 TRAV25A0A0B4J276 109 aa16.67■□□□□ 0.26
CHMP2A-204ENST00000597848 COX7A2P2O60397 106 aa16.67■□□□□ 0.26
CHMP2A-204ENST00000597848 PRR20EP86478 221 aa16.67■□□□□ 0.26
CHMP2A-204ENST00000597848 PRR20CP86479 221 aa16.67■□□□□ 0.26
CHMP2A-204ENST00000597848 PRR20DP86480 221 aa16.67■□□□□ 0.26
CHMP2A-204ENST00000597848 PRR20BP86481 221 aa16.67■□□□□ 0.26
CHMP2A-204ENST00000597848 PRR20AP86496 221 aa16.67■□□□□ 0.26
CHMP2A-204ENST00000597848 NEURL2Q9BR09 285 aa16.67■□□□□ 0.26
CHMP2A-204ENST00000597848 KCNIP2Q9NS61 270 aa16.67■□□□□ 0.26
CHMP2A-204ENST00000597848 BUB3O43684 328 aa16.66■□□□□ 0.26
CHMP2A-204ENST00000597848 GP9P14770 177 aa16.66■□□□□ 0.26
CHMP2A-204ENST00000597848 C16orf54Q6UWD8 224 aa16.66■□□□□ 0.26
CHMP2A-204ENST00000597848 S100A7AQ86SG5 101 aa16.66■□□□□ 0.26
CHMP2A-204ENST00000597848 RSG1Q9BU20 258 aa16.66■□□□□ 0.26
CHMP2A-204ENST00000597848 PARD6GQ9BYG4 376 aaPredicted RBP16.66■□□□□ 0.26
CHMP2A-204ENST00000597848 CMYA5Q8N3K9 4069 aa16.65■□□□□ 0.26
CHMP2A-204ENST00000597848 IGKV3-7A0A075B6H7 116 aa16.65■□□□□ 0.26
CHMP2A-204ENST00000597848 BORCS7-ASMTA0A0B4J1R7 106 aa16.65■□□□□ 0.26
CHMP2A-204ENST00000597848 ZNF785A8K8V0 405 aa16.65■□□□□ 0.26
CHMP2A-204ENST00000597848 PRB2P02812 416 aaPredicted RBP16.65■□□□□ 0.26
CHMP2A-204ENST00000597848 CD5P06127 495 aa16.65■□□□□ 0.26
CHMP2A-204ENST00000597848 PATE2Q6UY27 113 aa16.65■□□□□ 0.26
CHMP2A-204ENST00000597848 PRR25Q96S07 402 aa16.65■□□□□ 0.26
CHMP2A-204ENST00000597848 ARV1Q9H2C2 271 aa16.65■□□□□ 0.26
CHMP2A-204ENST00000597848 DNAJC4Q9NNZ3 241 aa16.65■□□□□ 0.26
CHMP2A-204ENST00000597848 ELOA3CA0A087WX78 387 aaPredicted RBP16.64■□□□□ 0.25
CHMP2A-204ENST00000597848 A0A0D9SG52 128 aa16.64■□□□□ 0.25
CHMP2A-204ENST00000597848 TAAR5O14804 337 aa16.64■□□□□ 0.25
CHMP2A-204ENST00000597848 C1QBP02746 253 aa16.64■□□□□ 0.25
CHMP2A-204ENST00000597848 CD300CQ08708 224 aa16.64■□□□□ 0.25
CHMP2A-204ENST00000597848 ZNF345Q14585 488 aa16.64■□□□□ 0.25
CHMP2A-204ENST00000597848 C10orf113Q5VZT2 155 aa16.64■□□□□ 0.25
CHMP2A-204ENST00000597848 OR8I2Q8N0Y5 310 aa16.64■□□□□ 0.25
CHMP2A-204ENST00000597848 KCNRGQ8N5I3 272 aa16.64■□□□□ 0.25
CHMP2A-204ENST00000597848 HSD17B11Q8NBQ5 300 aa16.64■□□□□ 0.25
CHMP2A-204ENST00000597848 OR1L4Q8NGR5 311 aa16.64■□□□□ 0.25
CHMP2A-204ENST00000597848 UHRF2Q96PU4 802 aa16.64■□□□□ 0.25
CHMP2A-204ENST00000597848 SLC25A39Q9BZJ4 359 aaPredicted RBP16.64■□□□□ 0.25
CHMP2A-204ENST00000597848 SLC25A22Q9H936 323 aa16.64■□□□□ 0.25
CHMP2A-204ENST00000597848 HELTA6NFD8 242 aa16.63■□□□□ 0.25
CHMP2A-204ENST00000597848 ZNF98A6NK75 572 aa16.63■□□□□ 0.25
CHMP2A-204ENST00000597848 TSPAN4O14817 238 aa16.63■□□□□ 0.25
CHMP2A-204ENST00000597848 CXCL2P19875 107 aa16.63■□□□□ 0.25
CHMP2A-204ENST00000597848 C1orf194Q5T5A4 169 aa16.63■□□□□ 0.25
CHMP2A-204ENST00000597848 FAM90A2PQ658T7 463 aa16.63■□□□□ 0.25
CHMP2A-204ENST00000597848 RPL7L1Q6DKI1 246 aaKnown RBP16.63■□□□□ 0.25
CHMP2A-204ENST00000597848 GBGT1Q8N5D6 347 aa16.63■□□□□ 0.25
CHMP2A-204ENST00000597848 GLMPQ8WWB7 406 aa16.63■□□□□ 0.25
CHMP2A-204ENST00000597848 TMEM37Q8WXS4 190 aa16.63■□□□□ 0.25
CHMP2A-204ENST00000597848 PFDN5Q99471 154 aa16.63■□□□□ 0.25
CHMP2A-204ENST00000597848 SHANK2-AS3Q9BTD1 123 aa16.63■□□□□ 0.25
CHMP2A-204ENST00000597848 SCRT1Q9BWW7 348 aa16.63■□□□□ 0.25
CHMP2A-204ENST00000597848 H3BRN7 92 aa16.62■□□□□ 0.25
CHMP2A-204ENST00000597848 TFPI2P48307 235 aa16.62■□□□□ 0.25
CHMP2A-204ENST00000597848 PAFAH1B2P68402 229 aa16.62■□□□□ 0.25
CHMP2A-204ENST00000597848 LEMD1Q68G75 181 aa16.62■□□□□ 0.25
CHMP2A-204ENST00000597848 LINC00305Q7Z4B0 112 aa16.62■□□□□ 0.25
CHMP2A-204ENST00000597848 HYLS1Q96M11 299 aa16.62■□□□□ 0.25
CHMP2A-204ENST00000597848 SPAG8Q99932 426 aaPredicted RBP16.62■□□□□ 0.25
CHMP2A-204ENST00000597848 ARPC5LQ9BPX5 153 aa16.62■□□□□ 0.25
CHMP2A-204ENST00000597848 NOTCH1P46531 2555 aa16.61■□□□□ 0.25
CHMP2A-204ENST00000597848 DNASE2O00115 360 aaPredicted RBP16.61■□□□□ 0.25
CHMP2A-204ENST00000597848 FFAR4Q5NUL3 377 aa16.61■□□□□ 0.25
CHMP2A-204ENST00000597848 SIGLEC15Q6ZMC9 328 aa16.61■□□□□ 0.25
CHMP2A-204ENST00000597848 WFDC3Q8IUB2 231 aa16.61■□□□□ 0.25
CHMP2A-204ENST00000597848 STXBP6Q8NFX7 210 aa16.61■□□□□ 0.25
CHMP2A-204ENST00000597848 RFNGQ9Y644 331 aa16.61■□□□□ 0.25
CHMP2A-204ENST00000597848 KANTRA0A1W2PQU2 76 aa16.6■□□□□ 0.25
CHMP2A-204ENST00000597848 PFDN1O60925 122 aa16.6■□□□□ 0.25
CHMP2A-204ENST00000597848 JTBO76095 146 aa16.6■□□□□ 0.25
CHMP2A-204ENST00000597848 ZFP69Q49AA0 526 aa16.6■□□□□ 0.25
CHMP2A-204ENST00000597848 GCSAMLQ5JQS6 135 aa16.6■□□□□ 0.25
CHMP2A-204ENST00000597848 TMUB2Q71RG4 321 aa16.6■□□□□ 0.25
CHMP2A-204ENST00000597848 GTSCR1Q86UQ5 136 aa16.6■□□□□ 0.25
CHMP2A-204ENST00000597848 GATAD1Q8WUU5 269 aa16.6■□□□□ 0.25
CHMP2A-204ENST00000597848 AURKAIP1Q9NWT8 199 aaPredicted RBP16.6■□□□□ 0.25
CHMP2A-204ENST00000597848 RNF24Q9Y225 148 aa16.6■□□□□ 0.25
CHMP2A-204ENST00000597848 TIMM9Q9Y5J7 89 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 1164.6 ms