RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 LINC00173Q6ZV60 143 aa4.3□□□□□ -1.72
PROM1-220ENST00000540805 ABHD12Q8N2K0 398 aa4.3□□□□□ -1.72
PROM1-220ENST00000540805 C5orf30Q96GV9 206 aa4.3□□□□□ -1.72
PROM1-220ENST00000540805 ADTRPQ96IZ2 230 aa4.3□□□□□ -1.72
PROM1-220ENST00000540805 GGTLC1Q9BX51 225 aa4.3□□□□□ -1.72
PROM1-220ENST00000540805 LINC00527Q9UJ94 153 aa4.3□□□□□ -1.72
PROM1-220ENST00000540805 TRAV30A0A087WSZ9 112 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 K7EMI3 77 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 SS18L1O75177 396 aaPredicted RBP4.29□□□□□ -1.72
PROM1-220ENST00000540805 AZU1P20160 251 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 NPY1RP25929 384 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 GNG4P50150 75 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 SHISA2Q6UWI4 295 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 TREML4Q6UXN2 200 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 OR4P4Q8NGL7 312 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 OR1L8Q8NGR8 309 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 FAM57AQ8TBR7 257 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 TMEM45BQ96B21 275 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 SGK494Q96LW2 274 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 MGST2Q99735 147 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 IGHV3-11P01762 117 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 FAM106CPP0CH98 169 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 APOBEC3AP31941 199 aaPredicted RBP4.29□□□□□ -1.72
PROM1-220ENST00000540805 GLRXP35754 106 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 CRYBA4P53673 196 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 CLDN18P56856 261 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 MEF2CQ06413 473 aaPredicted RBP4.29□□□□□ -1.72
PROM1-220ENST00000540805 PSG5Q15238 335 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 PRR30Q53SZ7 412 aaPredicted RBP4.29□□□□□ -1.72
PROM1-220ENST00000540805 CENPWQ5EE01 88 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 TIMM23BQ5SRD1 257 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 MRPL54Q6P161 138 aaKnown RBP4.29□□□□□ -1.72
PROM1-220ENST00000540805 TRAT1Q6PIZ9 186 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 RBPMS2Q6ZRY4 209 aaKnown RBP4.29□□□□□ -1.72
PROM1-220ENST00000540805 OR4A5Q8NH83 315 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 TSKUQ8WUA8 353 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 BMPR1BO00238 502 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 CA1P00915 261 aaPredicted RBP4.29□□□□□ -1.72
PROM1-220ENST00000540805 EIF4EBP1Q13541 118 aaPredicted RBP4.29□□□□□ -1.72
PROM1-220ENST00000540805 FXYD3Q14802 87 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 GABRA6Q16445 453 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 SAMD13Q5VXD3 122 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 ACP7Q6ZNF0 438 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 MTURNQ8N3F0 131 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 CHRDL1Q9BU40 450 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 LINC00470Q9BZP3 86 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 OSTCQ9NRP0 149 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 CALYQ9NYX4 217 aa4.29□□□□□ -1.72
PROM1-220ENST00000540805 TRAV9-2A0A087WT02 112 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 B9A039 149 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 APCSP02743 223 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 OR9G9P0C7N8 305 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 AREGP15514 252 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 HOXA4Q00056 320 aaPredicted RBP4.28□□□□□ -1.72
PROM1-220ENST00000540805 TBR1Q16650 682 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 SPATA31B1PQ5VZV4 182 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 PRSS57Q6UWY2 283 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 C5orf17Q8NAS9 161 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 RAB37Q96AX2 223 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 MRPL27Q9P0M9 148 aaKnown RBP4.28□□□□□ -1.72
PROM1-220ENST00000540805 HELTA6NFD8 242 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 C12orf77C9JDV5 145 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 HSBP1O75506 76 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 IGHV3-23P01764 117 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 PRB4P10163 310 aaPredicted RBP4.28□□□□□ -1.72
PROM1-220ENST00000540805 CCL3L1P16619 93 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 USF1P22415 310 aaPredicted RBP4.28□□□□□ -1.72
PROM1-220ENST00000540805 IGHV1-2P23083 117 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 RAB9AP51151 201 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 BRWD1-AS2P59051 145 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 EBLN2Q6P2I7 272 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 PQLC2Q6ZP29 291 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 FER1L6-AS1Q8NA97 138 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 JMJD8Q96S16 334 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 C19orf24Q9BVV8 132 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 RNASE7Q9H1E1 156 aaKnown RBP4.28□□□□□ -1.72
PROM1-220ENST00000540805 NPVFQ9HCQ7 196 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 TECRQ9NZ01 308 aaKnown RBP4.28□□□□□ -1.72
PROM1-220ENST00000540805 TANC2Q9HCD6 1990 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 IGHV3-66A0A0C4DH42 116 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 ZNF503-AS2A6NEH8 195 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 LIPFP07098 398 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 HTN3P15516 51 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 EFNB3Q15768 340 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 NUP37Q8NFH4 326 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 FAM216AQ8WUB2 273 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 DPH3Q96FX2 82 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 MGAM2Q2M2H8 2515 aa4.28□□□□□ -1.72
PROM1-220ENST00000540805 ASH1LQ9NR48 2969 aaKnown RBP4.28□□□□□ -1.73
PROM1-220ENST00000540805 LINC00473A8K010 186 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.27□□□□□ -1.73
PROM1-220ENST00000540805 M0R2Z0 102 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 FOXH1O75593 365 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 CGAP01215 116 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 LINC00869P0C866 280 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 CRYBB3P26998 211 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 ZNF146Q15072 292 aa4.27□□□□□ -1.73
PROM1-220ENST00000540805 IBA57Q5T440 356 aaKnown RBP4.27□□□□□ -1.73
PROM1-220ENST00000540805 FAM53AQ6NSI3 398 aaPredicted RBP4.27□□□□□ -1.73
PROM1-220ENST00000540805 PIP4P1Q86T03 277 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms