RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 ST8SIA2Q92186 375 aa11.93□□□□□ -0.5
TRA2A-208ENST00000490942 GGTLC1Q9BX51 225 aa11.93□□□□□ -0.5
TRA2A-208ENST00000490942 WDR61Q9GZS3 305 aaKnown RBP11.93□□□□□ -0.5
TRA2A-208ENST00000490942 ELOA3CA0A087WX78 387 aaPredicted RBP11.92□□□□□ -0.5
TRA2A-208ENST00000490942 FXYD6-FXYD2A0A087WZ82 144 aa11.92□□□□□ -0.5
TRA2A-208ENST00000490942 ZNF785A8K8V0 405 aa11.92□□□□□ -0.5
TRA2A-208ENST00000490942 HMSDA8MTL9 139 aa11.92□□□□□ -0.5
TRA2A-208ENST00000490942 HYPMO75409 117 aa11.92□□□□□ -0.5
TRA2A-208ENST00000490942 IFNA5P01569 189 aa11.92□□□□□ -0.5
TRA2A-208ENST00000490942 FGF7P21781 194 aa11.92□□□□□ -0.5
TRA2A-208ENST00000490942 C16orf54Q6UWD8 224 aa11.92□□□□□ -0.5
TRA2A-208ENST00000490942 Q6ZRG5 221 aa11.92□□□□□ -0.5
TRA2A-208ENST00000490942 TCTE3Q8IZS6 198 aa11.92□□□□□ -0.5
TRA2A-208ENST00000490942 RNF2Q99496 336 aa11.92□□□□□ -0.5
TRA2A-208ENST00000490942 PBDC1Q9BVG4 233 aa11.92□□□□□ -0.5
TRA2A-208ENST00000490942 NPCDR1Q9BY65 106 aa11.92□□□□□ -0.5
TRA2A-208ENST00000490942 FBXL17Q9UF56 701 aa11.92□□□□□ -0.5
TRA2A-208ENST00000490942 RNF222A6NCQ9 220 aa11.91□□□□□ -0.5
TRA2A-208ENST00000490942 C17orf112F2Z3M2 114 aa11.91□□□□□ -0.5
TRA2A-208ENST00000490942 APOHP02749 345 aaPredicted RBP11.91□□□□□ -0.5
TRA2A-208ENST00000490942 GATA2P23769 480 aaPredicted RBP11.91□□□□□ -0.5
TRA2A-208ENST00000490942 ZNF345Q14585 488 aa11.91□□□□□ -0.5
TRA2A-208ENST00000490942 STPG3Q8N7X2 389 aa11.91□□□□□ -0.5
TRA2A-208ENST00000490942 GLMPQ8WWB7 406 aa11.91□□□□□ -0.5
TRA2A-208ENST00000490942 ST6GAL2Q96JF0 529 aa11.91□□□□□ -0.5
TRA2A-208ENST00000490942 GPR82Q96P67 336 aa11.91□□□□□ -0.5
TRA2A-208ENST00000490942 IZUMO1RA6ND01 250 aa11.9□□□□□ -0.5
TRA2A-208ENST00000490942 OR4C46A6NHA9 309 aa11.9□□□□□ -0.5
TRA2A-208ENST00000490942 TAAR5O14804 337 aa11.9□□□□□ -0.5
TRA2A-208ENST00000490942 ORM2P19652 201 aa11.9□□□□□ -0.5
TRA2A-208ENST00000490942 PAFAH1B2P68402 229 aa11.9□□□□□ -0.5
TRA2A-208ENST00000490942 TCF24Q7RTU0 167 aa11.9□□□□□ -0.5
TRA2A-208ENST00000490942 ZNF709Q8N972 641 aa11.9□□□□□ -0.5
TRA2A-208ENST00000490942 OR1L4Q8NGR5 311 aa11.9□□□□□ -0.5
TRA2A-208ENST00000490942 SCGB1C1Q8TD33 95 aa11.9□□□□□ -0.5
TRA2A-208ENST00000490942 PFDN5Q99471 154 aa11.9□□□□□ -0.5
TRA2A-208ENST00000490942 FAM110AQ9BQ89 295 aa11.9□□□□□ -0.5
TRA2A-208ENST00000490942 SLC39A9Q9NUM3 307 aa11.9□□□□□ -0.5
TRA2A-208ENST00000490942 AURKAIP1Q9NWT8 199 aaPredicted RBP11.9□□□□□ -0.5
TRA2A-208ENST00000490942 HIGD1AQ9Y241 93 aa11.9□□□□□ -0.5
TRA2A-208ENST00000490942 IGHV3-49A0A0A0MS15 119 aa11.89□□□□□ -0.51
TRA2A-208ENST00000490942 CMC4P56277 68 aaPredicted RBP11.89□□□□□ -0.51
TRA2A-208ENST00000490942 B2MP61769 119 aa11.89□□□□□ -0.51
TRA2A-208ENST00000490942 SAMD13Q5VXD3 122 aa11.89□□□□□ -0.51
TRA2A-208ENST00000490942 GTSCR1Q86UQ5 136 aa11.89□□□□□ -0.51
TRA2A-208ENST00000490942 OR1B1Q8NGR6 318 aa11.89□□□□□ -0.51
TRA2A-208ENST00000490942 SHANK2-AS3Q9BTD1 123 aa11.89□□□□□ -0.51
TRA2A-208ENST00000490942 ARL6Q9H0F7 186 aa11.89□□□□□ -0.51
TRA2A-208ENST00000490942 ARV1Q9H2C2 271 aa11.89□□□□□ -0.51
TRA2A-208ENST00000490942 TIMM9Q9Y5J7 89 aa11.89□□□□□ -0.51
TRA2A-208ENST00000490942 PXMP4Q9Y6I8 212 aa11.89□□□□□ -0.51
TRA2A-208ENST00000490942 IGHV3OR16-13A0A075B7E8 117 aa11.88□□□□□ -0.51
TRA2A-208ENST00000490942 IGHV3-74A0A0B4J1X5 117 aa11.88□□□□□ -0.51
TRA2A-208ENST00000490942 ZNF98A6NK75 572 aa11.88□□□□□ -0.51
TRA2A-208ENST00000490942 H3BRN7 92 aa11.88□□□□□ -0.51
TRA2A-208ENST00000490942 ARPC5O15511 151 aa11.88□□□□□ -0.51
TRA2A-208ENST00000490942 GUCA2BQ16661 112 aa11.88□□□□□ -0.51
TRA2A-208ENST00000490942 MIC13Q5XKP0 118 aa11.88□□□□□ -0.51
TRA2A-208ENST00000490942 AKAP14Q86UN6 197 aa11.88□□□□□ -0.51
TRA2A-208ENST00000490942 GATAD1Q8WUU5 269 aa11.88□□□□□ -0.51
TRA2A-208ENST00000490942 PPP1R14BQ96C90 147 aa11.88□□□□□ -0.51
TRA2A-208ENST00000490942 SLC25A39Q9BZJ4 359 aaPredicted RBP11.88□□□□□ -0.51
TRA2A-208ENST00000490942 SMIM3Q9BZL3 60 aa11.88□□□□□ -0.51
TRA2A-208ENST00000490942 MFFQ9GZY8 342 aa11.88□□□□□ -0.51
TRA2A-208ENST00000490942 SEPSECSQ9HD40 501 aaKnown RBP11.88□□□□□ -0.51
TRA2A-208ENST00000490942 DNAJC4Q9NNZ3 241 aa11.88□□□□□ -0.51
TRA2A-208ENST00000490942 COX7A2P2O60397 106 aa11.87□□□□□ -0.51
TRA2A-208ENST00000490942 OR5G3P0C626 314 aa11.87□□□□□ -0.51
TRA2A-208ENST00000490942 RPL7P18124 248 aaKnown RBP11.87□□□□□ -0.51
TRA2A-208ENST00000490942 DEFA6Q01524 100 aa11.87□□□□□ -0.51
TRA2A-208ENST00000490942 SIGLEC15Q6ZMC9 328 aa11.87□□□□□ -0.51
TRA2A-208ENST00000490942 OR8I2Q8N0Y5 310 aa11.87□□□□□ -0.51
TRA2A-208ENST00000490942 TMEM37Q8WXS4 190 aa11.87□□□□□ -0.51
TRA2A-208ENST00000490942 WFDC1Q9HC57 220 aa11.87□□□□□ -0.51
TRA2A-208ENST00000490942 IGHV3-66A0A0C4DH42 116 aa11.86□□□□□ -0.51
TRA2A-208ENST00000490942 A0A0D9SG52 128 aa11.86□□□□□ -0.51
TRA2A-208ENST00000490942 A8MZ25 164 aa11.86□□□□□ -0.51
TRA2A-208ENST00000490942 MEOX2P50222 304 aa11.86□□□□□ -0.51
TRA2A-208ENST00000490942 C10orf113Q5VZT2 155 aa11.86□□□□□ -0.51
TRA2A-208ENST00000490942 PATE2Q6UY27 113 aa11.86□□□□□ -0.51
TRA2A-208ENST00000490942 Q8N1Y9 231 aa11.86□□□□□ -0.51
TRA2A-208ENST00000490942 KCNRGQ8N5I3 272 aa11.86□□□□□ -0.51
TRA2A-208ENST00000490942 PRR25Q96S07 402 aa11.86□□□□□ -0.51
TRA2A-208ENST00000490942 PSMG3Q9BT73 122 aaPredicted RBP11.86□□□□□ -0.51
TRA2A-208ENST00000490942 MS4A6AQ9H2W1 248 aa11.86□□□□□ -0.51
TRA2A-208ENST00000490942 NRN1Q9NPD7 142 aa11.86□□□□□ -0.51
TRA2A-208ENST00000490942 DOK5Q9P104 306 aa11.86□□□□□ -0.51
TRA2A-208ENST00000490942 BORCS7-ASMTA0A0B4J1R7 106 aa11.85□□□□□ -0.51
TRA2A-208ENST00000490942 SMLR1H3BR10 107 aa11.85□□□□□ -0.51
TRA2A-208ENST00000490942 JTBO76095 146 aa11.85□□□□□ -0.51
TRA2A-208ENST00000490942 C1QBP02746 253 aa11.85□□□□□ -0.51
TRA2A-208ENST00000490942 GALR1P47211 349 aa11.85□□□□□ -0.51
TRA2A-208ENST00000490942 RPL11P62913 178 aaKnown RBP11.85□□□□□ -0.51
TRA2A-208ENST00000490942 LINC00305Q7Z4B0 112 aa11.85□□□□□ -0.51
TRA2A-208ENST00000490942 OR11H4Q8NGC9 324 aa11.85□□□□□ -0.51
TRA2A-208ENST00000490942 hCG_2014768A0A024R1R8 64 aa11.84□□□□□ -0.51
TRA2A-208ENST00000490942 K7EIL1 84 aa11.84□□□□□ -0.51
TRA2A-208ENST00000490942 DNASE2O00115 360 aaPredicted RBP11.84□□□□□ -0.51
TRA2A-208ENST00000490942 CD81P60033 236 aa11.84□□□□□ -0.51
TRA2A-208ENST00000490942 OR2G3Q8NGZ4 309 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms