RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CYSLTR1Q9Y271 337 aa2.07□□□□□ -2.08
HMGN4-202ENST00000477243 AMMECR1Q9Y4X0 333 aaPredicted RBP2.07□□□□□ -2.08
HMGN4-202ENST00000477243 HEY1Q9Y5J3 304 aa2.07□□□□□ -2.08
HMGN4-202ENST00000477243 PRSS21Q9Y6M0 314 aa2.07□□□□□ -2.08
HMGN4-202ENST00000477243 DOCK1Q14185 1865 aa2.07□□□□□ -2.08
HMGN4-202ENST00000477243 DSCAML1Q8TD84 2053 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 ZNF236Q9UL36 1845 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 IGHV3OR15-7A0A075B7D8 119 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 IGHV5-51A0A0C4DH38 117 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 IGHV5-10-1A0A0J9YXX1 117 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 LOC102725191A0A1B0GVB3 256 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 TLCD2A6NGC4 264 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 FABP5P3A8MUU1 101 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 IGLL5B9A064 214 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 CLDN25C9JDP6 229 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 BPY2O14599 106 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 OVOL1O14753 267 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 SOCS1O15524 211 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 SRP19P09132 144 aaKnown RBP2.06□□□□□ -2.08
HMGN4-202ENST00000477243 SEC11BP0C7V7 166 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 P0DMU3 169 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 FAM231AP0DMU4 169 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 FAM231CP0DMU5 169 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 IGHV1-8P0DP01 117 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 ELK1P19419 428 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 ACVRL1P37023 503 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 AKR1C2P52895 323 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 TAS2R45P59539 299 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 FGF12P61328 243 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 RPL36AP83881 106 aaKnown RBP2.06□□□□□ -2.08
HMGN4-202ENST00000477243 BIKQ13323 160 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 EIF3IQ13347 325 aaKnown RBP2.06□□□□□ -2.08
HMGN4-202ENST00000477243 RTL8BQ17RB0 113 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 Q1RN00 199 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 RPL22L1Q6P5R6 122 aaKnown RBP2.06□□□□□ -2.08
HMGN4-202ENST00000477243 SLC25A34Q6PIV7 304 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 TIFABQ6ZNK6 161 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 Q6ZS52 159 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 WDR86Q86TI4 376 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 MARCH3Q86UD3 253 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 PRR15Q8IV56 129 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 IFT20Q8IY31 132 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 TMEM256Q8N2U0 113 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 EXOC3-AS1Q8N2X6 119 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 ZNF645Q8N7E2 425 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 ZNF433Q8N7K0 673 aaPredicted RBP2.06□□□□□ -2.08
HMGN4-202ENST00000477243 C20orf203Q8NBC4 194 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 OR10D4PQ8NGN7 298 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 OR5W2Q8NH69 310 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 RPS4Y2Q8TD47 263 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 ZNF721Q8TF20 911 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 C2orf15Q8WU43 125 aaKnown RBP2.06□□□□□ -2.08
HMGN4-202ENST00000477243 RAB2BQ8WUD1 216 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 GTSF1Q8WW33 167 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 CMBLQ96DG6 245 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 BORCS8Q96FH0 119 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 C14orf144Q96I85 54 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 LINC00479Q96M42 142 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 ZNF778Q96MU6 729 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 IP6K3Q96PC2 410 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 LITAFQ99732 161 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 SLC25A21Q9BQT8 299 aaPredicted RBP2.06□□□□□ -2.08
HMGN4-202ENST00000477243 PRADC1Q9BSG0 188 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 CHCHD7Q9BUK0 85 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 NKX6-2Q9C056 277 aaPredicted RBP2.06□□□□□ -2.08
HMGN4-202ENST00000477243 YIPF3Q9GZM5 350 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 OR8D2Q9GZM6 311 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 C11orf68Q9H3H3 251 aaKnown RBP2.06□□□□□ -2.08
HMGN4-202ENST00000477243 CA10Q9NS85 328 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 CKLFQ9UBR5 152 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 NAT8BQ9UHF3 227 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 HS3ST2Q9Y278 367 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 MRPS16Q9Y3D3 137 aaKnown RBP2.06□□□□□ -2.08
HMGN4-202ENST00000477243 GREB1Q4ZG55 1949 aa2.06□□□□□ -2.08
HMGN4-202ENST00000477243 SACSQ9NZJ4 4579 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 NLRC5Q86WI3 1866 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 DOCK4Q8N1I0 1966 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 KMT2AQ03164 3969 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 PRRC2AP48634 2157 aaKnown RBP2.05□□□□□ -2.08
HMGN4-202ENST00000477243 SDK2Q58EX2 2172 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 IRGMA1A4Y4 181 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 C20orf202A1L168 122 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 ARRDC5A6NEK1 342 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 K7ERS5 55 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 LY6G6DO95868 133 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 NCR2O95944 276 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 NRASP01111 189 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 APCSP02743 223 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 TRGC2P03986 189 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 HIST1H2BOP23527 126 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 S100A4P26447 101 aaKnown RBP2.05□□□□□ -2.08
HMGN4-202ENST00000477243 S100A2P29034 98 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 CASP1P29466 404 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 S100A11P31949 105 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 HIST1H2BBP33778 126 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 EVX1P49640 407 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 DAPP51397 102 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 ZNF136P52737 540 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 AQP4P55087 323 aa2.05□□□□□ -2.08
HMGN4-202ENST00000477243 NDUFA6P56556 154 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms