RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ZNF727A8MUV8 499 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 KLLNB2CW77 178 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 NCR2O95944 276 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 TRBV12-3P01733 135 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 ADCYAP1P18509 176 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 GADD45AP24522 165 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 NFYBP25208 207 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 PSMB8P28062 276 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 CCL23P55773 120 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 GNG11P61952 73 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 CRADDP78560 199 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 PLGLB1Q02325 96 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 ERCC8Q13216 396 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 CST6Q15828 149 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 LGALSLQ3ZCW2 172 aaPredicted RBP2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 TRAPPC6BQ86SZ2 158 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 ATOH7Q8N100 152 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 LINC00311Q8N616 119 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 ZFP62Q8NB50 900 aaPredicted RBP2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 OR11H7Q8NGC8 314 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 C18orf15Q96N68 181 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 SNRNP25Q9BV90 132 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 SEC11CQ9BY50 192 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 KRTAP1-5Q9BYS1 174 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 RERGLQ9H628 205 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 LAMTOR3Q9UHA4 124 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 POMPQ9Y244 141 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 KIAA1671Q9BY89 1806 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 LMO7Q8WWI1 1683 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 KMT2BQ9UMN6 2715 aaPredicted RBP2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 TIAM2Q8IVF5 1701 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 A0A1B0GUL6 1792 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 MYO10Q9HD67 2058 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 IGKV1-27A0A075B6S5 117 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 TRAV8-3A0A0A6YYJ7 113 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 IGHV3OR16-9A0A0B4J2B5 98 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 IGLC7A0M8Q6 106 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 MEIS3P1A6NDR6 274 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 G3V3Q6 166 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 TRGC2P03986 189 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 CRISP2P16562 243 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 HOXB6P17509 224 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 PPIBP23284 216 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 CRYBB3P26998 211 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 MRPL54Q6P161 138 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 DCANP1Q8TF63 244 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 C16orf95Q9H693 158 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 C21orf62Q9NYP8 219 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 MPC1Q9Y5U8 109 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 CCDC88CQ9P219 2028 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 UBR2Q8IWV8 1755 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 PAPPA2Q9BXP8 1791 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 MUC6Q6W4X9 2439 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 ATRXP46100 2492 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 TRBV20-1A0A075B6N2 111 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 TRAV27A0A087WT01 109 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 K7EP34 96 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 HIST1H2BKO60814 126 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 DEDDO75618 318 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 APOMO95445 188 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 CGAP01215 116 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 IGLV2-23P01705 113 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 HIST1H2BJP06899 126 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 SMIM10L2AP0DMW4 78 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 SMIM10L2BP0DMW5 78 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 HIST1H2BOP23527 126 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 HIST1H2BBP33778 126 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 SRP14P37108 136 aaKnown RBP2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 HIST1H2BDP58876 126 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 HIST1H2BCP62807 126 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 IGLV3-21P80748 117 aaPredicted RBP2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 ATP5G2Q06055 141 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 MSMO1Q15800 293 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 HIST2H2BEQ16778 126 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 TMEM183BQ1AE95 376 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 LINC00596Q86U02 117 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 TMEM183AQ8IXX5 376 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 DEFB123Q8N688 67 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 WFDC11Q8NEX6 87 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 OR2T10Q8NGZ9 312 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 SGMS2Q8NHU3 365 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 HIST1H2BHQ93079 126 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 NEURL3Q96EH8 262 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 HIST1H2BNQ99877 126 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 HIST1H2BMQ99879 126 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 UQCR10Q9UDW1 63 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 HTTP42858 3142 aa2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 TDRD6O60522 2096 aaKnown RBP2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 KIF26AQ9ULI4 1882 aaPredicted RBP2.86□□□□□ -1.95
CDC42BPA-207ENST00000441725 CCL15-CCL14A0A0B4J2E2 113 aa2.85□□□□□ -1.95
CDC42BPA-207ENST00000441725 TCRBV3S1A0A5B6 114 aa2.85□□□□□ -1.95
CDC42BPA-207ENST00000441725 OOSP1A8MZH6 123 aa2.85□□□□□ -1.95
CDC42BPA-207ENST00000441725 LGALS9O00182 355 aa2.85□□□□□ -1.95
CDC42BPA-207ENST00000441725 GEMIN2O14893 280 aaKnown RBP2.85□□□□□ -1.95
CDC42BPA-207ENST00000441725 UBL3O95164 117 aa2.85□□□□□ -1.95
CDC42BPA-207ENST00000441725 MT-ND6P03923 174 aa2.85□□□□□ -1.95
CDC42BPA-207ENST00000441725 RSPO1Q2MKA7 263 aaPredicted RBP2.85□□□□□ -1.95
CDC42BPA-207ENST00000441725 HEPN1Q6WQI6 88 aa2.85□□□□□ -1.95
CDC42BPA-207ENST00000441725 SHISA6Q6ZSJ9 500 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms