RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 IGHV3-49A0A0A0MS15 119 aa13.3□□□□□ -0.28
CCDC188-201ENST00000439765 AGPAT2O15120 278 aa13.3□□□□□ -0.28
CCDC188-201ENST00000439765 SCGB2A1O75556 95 aa13.3□□□□□ -0.28
CCDC188-201ENST00000439765 C8orf88P0DMB2 117 aa13.3□□□□□ -0.28
CCDC188-201ENST00000439765 TOMM20LQ6UXN7 152 aa13.3□□□□□ -0.28
CCDC188-201ENST00000439765 ZNF600Q6ZNG1 722 aa13.3□□□□□ -0.28
CCDC188-201ENST00000439765 U3KQK5 164 aa13.3□□□□□ -0.28
CCDC188-201ENST00000439765 CAMLGP49069 296 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 CD81P60033 236 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 YPEL3P61236 119 aaPredicted RBP13.29□□□□□ -0.28
CCDC188-201ENST00000439765 ZNF90Q03938 601 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 CYP2G1PQ6ZSU1 146 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 SLC51BQ86UW2 128 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 NPCDR1Q9BY65 106 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 ARV1Q9H2C2 271 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 ZFAND3Q9H8U3 227 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 IGHV3OR16-13A0A075B7E8 117 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 IGHV3-74A0A0B4J1X5 117 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 K7EMT4 169 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 Q8N1Y9 231 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 HSD17B11Q8NBQ5 300 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 GINS3Q9BRX5 216 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 GGTLC1Q9BX51 225 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 SLC45A2Q9UMX9 530 aa13.29□□□□□ -0.28
CCDC188-201ENST00000439765 IGHV7-4-1A0A0J9YVY3 117 aa13.28□□□□□ -0.28
CCDC188-201ENST00000439765 ZNF785A8K8V0 405 aa13.28□□□□□ -0.28
CCDC188-201ENST00000439765 FABP1P07148 127 aa13.28□□□□□ -0.28
CCDC188-201ENST00000439765 ATP6V0CP27449 155 aa13.28□□□□□ -0.28
CCDC188-201ENST00000439765 SELENOTP62341 195 aa13.28□□□□□ -0.28
CCDC188-201ENST00000439765 EIF5AP63241 154 aaKnown RBP13.28□□□□□ -0.28
CCDC188-201ENST00000439765 TMEM182Q6ZP80 229 aaPredicted RBP13.28□□□□□ -0.28
CCDC188-201ENST00000439765 RBPMS2Q6ZRY4 209 aaKnown RBP13.28□□□□□ -0.28
CCDC188-201ENST00000439765 ZNF709Q8N972 641 aa13.28□□□□□ -0.28
CCDC188-201ENST00000439765 STOML3Q8TAV4 291 aa13.28□□□□□ -0.28
CCDC188-201ENST00000439765 RSG1Q9BU20 258 aa13.28□□□□□ -0.28
CCDC188-201ENST00000439765 C17orf112F2Z3M2 114 aa13.27□□□□□ -0.29
CCDC188-201ENST00000439765 TOMM40O96008 361 aa13.27□□□□□ -0.29
CCDC188-201ENST00000439765 CD7P09564 240 aa13.27□□□□□ -0.29
CCDC188-201ENST00000439765 FRMD6-AS1P0C7T7 363 aa13.27□□□□□ -0.29
CCDC188-201ENST00000439765 RD3LP0DJH9 198 aa13.27□□□□□ -0.29
CCDC188-201ENST00000439765 IGHV4-30-4P0DP06 118 aa13.27□□□□□ -0.29
CCDC188-201ENST00000439765 PSG1P11464 419 aa13.27□□□□□ -0.29
CCDC188-201ENST00000439765 TPT1P13693 172 aaKnown RBP13.27□□□□□ -0.29
CCDC188-201ENST00000439765 GATA2P23769 480 aaPredicted RBP13.27□□□□□ -0.29
CCDC188-201ENST00000439765 RPL29P47914 159 aaKnown RBP13.27□□□□□ -0.29
CCDC188-201ENST00000439765 Q8WTZ3 238 aa13.27□□□□□ -0.29
CCDC188-201ENST00000439765 RHPN1-AS1Q9BWJ2 59 aa13.27□□□□□ -0.29
CCDC188-201ENST00000439765 SMPXQ9UHP9 88 aa13.27□□□□□ -0.29
CCDC188-201ENST00000439765 TIMM9Q9Y5J7 89 aa13.27□□□□□ -0.29
CCDC188-201ENST00000439765 IGHV3-66A0A0C4DH42 116 aa13.26□□□□□ -0.29
CCDC188-201ENST00000439765 MIC13Q5XKP0 118 aa13.26□□□□□ -0.29
CCDC188-201ENST00000439765 BAP18Q8IXM2 172 aa13.26□□□□□ -0.29
CCDC188-201ENST00000439765 BPIFCQ8NFQ6 507 aa13.26□□□□□ -0.29
CCDC188-201ENST00000439765 GNPNAT1Q96EK6 184 aaPredicted RBP13.26□□□□□ -0.29
CCDC188-201ENST00000439765 WFDC10AQ9H1F0 79 aa13.26□□□□□ -0.29
CCDC188-201ENST00000439765 RFNGQ9Y644 331 aa13.26□□□□□ -0.29
CCDC188-201ENST00000439765 CHEK1O14757 476 aa13.25□□□□□ -0.29
CCDC188-201ENST00000439765 LINC00869P0C866 280 aa13.25□□□□□ -0.29
CCDC188-201ENST00000439765 PRR20EP86478 221 aa13.25□□□□□ -0.29
CCDC188-201ENST00000439765 PRR20CP86479 221 aa13.25□□□□□ -0.29
CCDC188-201ENST00000439765 PRR20DP86480 221 aa13.25□□□□□ -0.29
CCDC188-201ENST00000439765 PRR20BP86481 221 aa13.25□□□□□ -0.29
CCDC188-201ENST00000439765 PRR20AP86496 221 aa13.25□□□□□ -0.29
CCDC188-201ENST00000439765 STPG3Q8N7X2 389 aa13.25□□□□□ -0.29
CCDC188-201ENST00000439765 OR51G1Q8NGK1 321 aa13.25□□□□□ -0.29
CCDC188-201ENST00000439765 ST8SIA2Q92186 375 aa13.25□□□□□ -0.29
CCDC188-201ENST00000439765 RNF2Q99496 336 aa13.25□□□□□ -0.29
CCDC188-201ENST00000439765 ASCL2Q99929 193 aa13.25□□□□□ -0.29
CCDC188-201ENST00000439765 PSMG3Q9BT73 122 aaPredicted RBP13.25□□□□□ -0.29
CCDC188-201ENST00000439765 HUWE1Q7Z6Z7 4374 aaKnown RBP13.25□□□□□ -0.29
CCDC188-201ENST00000439765 TRAV25A0A0B4J276 109 aa13.24□□□□□ -0.29
CCDC188-201ENST00000439765 CFDP00746 253 aaPredicted RBP13.24□□□□□ -0.29
CCDC188-201ENST00000439765 APOHP02749 345 aaPredicted RBP13.24□□□□□ -0.29
CCDC188-201ENST00000439765 SPP1P10451 314 aa13.24□□□□□ -0.29
CCDC188-201ENST00000439765 SH3BGRL3Q9H299 93 aa13.24□□□□□ -0.29
CCDC188-201ENST00000439765 SLC25A32Q9H2D1 315 aa13.24□□□□□ -0.29
CCDC188-201ENST00000439765 KCNIP2Q9NS61 270 aa13.24□□□□□ -0.29
CCDC188-201ENST00000439765 SLC39A9Q9NUM3 307 aa13.24□□□□□ -0.29
CCDC188-201ENST00000439765 PXMP4Q9Y6I8 212 aa13.24□□□□□ -0.29
CCDC188-201ENST00000439765 IGKV3-7A0A075B6H7 116 aa13.23□□□□□ -0.29
CCDC188-201ENST00000439765 B2MP61769 119 aa13.23□□□□□ -0.29
CCDC188-201ENST00000439765 METTL26Q96S19 204 aa13.23□□□□□ -0.29
CCDC188-201ENST00000439765 IL4P05112 153 aa13.23□□□□□ -0.29
CCDC188-201ENST00000439765 SEC11BP0C7V7 166 aa13.23□□□□□ -0.29
CCDC188-201ENST00000439765 SERF2P84101 59 aa13.23□□□□□ -0.29
CCDC188-201ENST00000439765 Q6ZRG5 221 aa13.23□□□□□ -0.29
CCDC188-201ENST00000439765 OR2G3Q8NGZ4 309 aa13.23□□□□□ -0.29
CCDC188-201ENST00000439765 SPAG8Q99932 426 aaPredicted RBP13.23□□□□□ -0.29
CCDC188-201ENST00000439765 TSPAN4O14817 238 aa13.22□□□□□ -0.29
CCDC188-201ENST00000439765 NPPCP23582 126 aa13.22□□□□□ -0.29
CCDC188-201ENST00000439765 BMI1P35226 326 aa13.22□□□□□ -0.29
CCDC188-201ENST00000439765 PLP1P60201 277 aa13.22□□□□□ -0.29
CCDC188-201ENST00000439765 FFAR4Q5NUL3 377 aa13.22□□□□□ -0.29
CCDC188-201ENST00000439765 SBSPONQ8IVN8 264 aa13.22□□□□□ -0.29
CCDC188-201ENST00000439765 DEFB125Q8N687 156 aa13.22□□□□□ -0.29
CCDC188-201ENST00000439765 RNF125Q96EQ8 232 aa13.22□□□□□ -0.29
CCDC188-201ENST00000439765 TUBA4BQ9H853 241 aa13.22□□□□□ -0.29
CCDC188-201ENST00000439765 OR11H12B2RN74 326 aa13.21□□□□□ -0.3
CCDC188-201ENST00000439765 LYZP61626 148 aa13.21□□□□□ -0.3
CCDC188-201ENST00000439765 USF2Q15853 346 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms