RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 FABP4P15090 132 aa18.16■□□□□ 0.5
RAB40B-201ENST00000269347 TMEM219Q86XT9 240 aa18.16■□□□□ 0.5
RAB40B-201ENST00000269347 SGK494Q96LW2 274 aa18.16■□□□□ 0.5
RAB40B-201ENST00000269347 FRMD6-AS1P0C7T7 363 aa18.15■□□□□ 0.5
RAB40B-201ENST00000269347 FAM106CPP0CH98 169 aa18.15■□□□□ 0.5
RAB40B-201ENST00000269347 PIFOQ8TCI5 191 aa18.15■□□□□ 0.5
RAB40B-201ENST00000269347 ZNF414Q96IQ9 312 aa18.15■□□□□ 0.5
RAB40B-201ENST00000269347 IMMP2LQ96T52 175 aa18.15■□□□□ 0.5
RAB40B-201ENST00000269347 SLC25A39Q9BZJ4 359 aaPredicted RBP18.15■□□□□ 0.5
RAB40B-201ENST00000269347 MRPL27Q9P0M9 148 aaKnown RBP18.15■□□□□ 0.5
RAB40B-201ENST00000269347 ABCA12Q86UK0 2595 aa18.15■□□□□ 0.5
RAB40B-201ENST00000269347 CSPG4Q6UVK1 2322 aa18.15■□□□□ 0.5
RAB40B-201ENST00000269347 TRAV40A0A0B4J280 105 aa18.15■□□□□ 0.5
RAB40B-201ENST00000269347 OR2J3O76001 311 aa18.15■□□□□ 0.5
RAB40B-201ENST00000269347 CTAG1AP78358 180 aa18.15■□□□□ 0.5
RAB40B-201ENST00000269347 ACTL10Q5JWF8 245 aa18.15■□□□□ 0.5
RAB40B-201ENST00000269347 Q71RC1 249 aaPredicted RBP18.15■□□□□ 0.5
RAB40B-201ENST00000269347 RNASE7Q9H1E1 156 aaKnown RBP18.15■□□□□ 0.5
RAB40B-201ENST00000269347 RD3LP0DJH9 198 aa18.14■□□□□ 0.49
RAB40B-201ENST00000269347 TMEM183AQ8IXX5 376 aa18.14■□□□□ 0.49
RAB40B-201ENST00000269347 ZNF491Q8N8L2 437 aa18.14■□□□□ 0.49
RAB40B-201ENST00000269347 SGMS2Q8NHU3 365 aa18.14■□□□□ 0.49
RAB40B-201ENST00000269347 LINC00587B1AMM8 73 aa18.14■□□□□ 0.49
RAB40B-201ENST00000269347 GNG4P50150 75 aa18.14■□□□□ 0.49
RAB40B-201ENST00000269347 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.14■□□□□ 0.49
RAB40B-201ENST00000269347 BTF3L4Q96K17 158 aa18.14■□□□□ 0.49
RAB40B-201ENST00000269347 HIGD1AQ9Y241 93 aa18.14■□□□□ 0.49
RAB40B-201ENST00000269347 G3V318 75 aa18.13■□□□□ 0.49
RAB40B-201ENST00000269347 ATP6V0E1O15342 81 aa18.13■□□□□ 0.49
RAB40B-201ENST00000269347 AVPP01185 164 aa18.13■□□□□ 0.49
RAB40B-201ENST00000269347 HLA-DRB1P01911 266 aa18.13■□□□□ 0.49
RAB40B-201ENST00000269347 CLEC2AQ6UVW9 174 aa18.13■□□□□ 0.49
RAB40B-201ENST00000269347 ZNF600Q6ZNG1 722 aa18.13■□□□□ 0.49
RAB40B-201ENST00000269347 OR10G8Q8NGN5 311 aa18.13■□□□□ 0.49
RAB40B-201ENST00000269347 C17orf77Q96MU5 243 aa18.13■□□□□ 0.49
RAB40B-201ENST00000269347 NBEAP1P0C6P0 100 aa18.13■□□□□ 0.49
RAB40B-201ENST00000269347 COL8A1P27658 744 aa18.13■□□□□ 0.49
RAB40B-201ENST00000269347 FOXL1Q12952 345 aa18.13■□□□□ 0.49
RAB40B-201ENST00000269347 ZNF586Q9NXT0 402 aa18.13■□□□□ 0.49
RAB40B-201ENST00000269347 V9GYV3 84 aa18.13■□□□□ 0.49
RAB40B-201ENST00000269347 ZNF320A2RRD8 509 aa18.12■□□□□ 0.49
RAB40B-201ENST00000269347 XKRY2A2RUG3 117 aa18.12■□□□□ 0.49
RAB40B-201ENST00000269347 ISLRO14498 428 aa18.12■□□□□ 0.49
RAB40B-201ENST00000269347 AMY1AP04745 511 aa18.12■□□□□ 0.49
RAB40B-201ENST00000269347 USF2Q15853 346 aaPredicted RBP18.12■□□□□ 0.49
RAB40B-201ENST00000269347 ECSCRQ19T08 205 aa18.11■□□□□ 0.49
RAB40B-201ENST00000269347 HIST1H2BLQ99880 126 aa18.11■□□□□ 0.49
RAB40B-201ENST00000269347 IGHV1-69DA0A0B4J2H0 117 aa18.11■□□□□ 0.49
RAB40B-201ENST00000269347 GOSR1O95249 250 aa18.11■□□□□ 0.49
RAB40B-201ENST00000269347 IGHV1-69P01742 117 aa18.11■□□□□ 0.49
RAB40B-201ENST00000269347 KRTAP10-9P60411 292 aa18.11■□□□□ 0.49
RAB40B-201ENST00000269347 PACRGQ96M98 296 aaPredicted RBP18.11■□□□□ 0.49
RAB40B-201ENST00000269347 LY96Q9Y6Y9 160 aa18.11■□□□□ 0.49
RAB40B-201ENST00000269347 PGPA6NDG6 321 aa18.1■□□□□ 0.49
RAB40B-201ENST00000269347 PEX7O00628 323 aa18.1■□□□□ 0.49
RAB40B-201ENST00000269347 IL4P05112 153 aa18.1■□□□□ 0.49
RAB40B-201ENST00000269347 BRS3P32247 399 aa18.1■□□□□ 0.49
RAB40B-201ENST00000269347 CHRDL1Q9BU40 450 aa18.1■□□□□ 0.49
RAB40B-201ENST00000269347 OR2T8A6NH00 312 aa18.09■□□□□ 0.49
RAB40B-201ENST00000269347 NDUFS8O00217 210 aa18.09■□□□□ 0.49
RAB40B-201ENST00000269347 TOMM40O96008 361 aa18.09■□□□□ 0.49
RAB40B-201ENST00000269347 COA6Q5JTJ3 125 aaKnown RBP18.09■□□□□ 0.49
RAB40B-201ENST00000269347 CDPF1Q6NVV7 123 aa18.09■□□□□ 0.49
RAB40B-201ENST00000269347 C5orf56Q8N8D9 126 aa18.09■□□□□ 0.49
RAB40B-201ENST00000269347 RNF125Q96EQ8 232 aa18.09■□□□□ 0.49
RAB40B-201ENST00000269347 RPH3ALQ9UNE2 315 aa18.09■□□□□ 0.49
RAB40B-201ENST00000269347 WI2-2373I1.2A0A1W2PRP0 233 aa18.08■□□□□ 0.49
RAB40B-201ENST00000269347 GCGP01275 180 aa18.08■□□□□ 0.49
RAB40B-201ENST00000269347 ERVFC1-1P60608 527 aa18.08■□□□□ 0.49
RAB40B-201ENST00000269347 RPL15P61313 204 aaKnown RBP18.08■□□□□ 0.49
RAB40B-201ENST00000269347 IGHV3OR16-8A0A075B7F1 116 aa18.08■□□□□ 0.48
RAB40B-201ENST00000269347 IGHV3-35A0A0C4DH35 117 aa18.08■□□□□ 0.48
RAB40B-201ENST00000269347 H3BRN7 92 aa18.08■□□□□ 0.48
RAB40B-201ENST00000269347 GNG7O60262 68 aa18.08■□□□□ 0.48
RAB40B-201ENST00000269347 ADMP35318 185 aa18.08■□□□□ 0.48
RAB40B-201ENST00000269347 UNQ5815/PRO19632Q6UWF5 114 aa18.08■□□□□ 0.48
RAB40B-201ENST00000269347 EXOC3-AS1Q8N2X6 119 aa18.08■□□□□ 0.48
RAB40B-201ENST00000269347 OR1L6Q8NGR2 347 aa18.08■□□□□ 0.48
RAB40B-201ENST00000269347 TMUB1Q9BVT8 246 aa18.08■□□□□ 0.48
RAB40B-201ENST00000269347 C21orf62Q9NYP8 219 aa18.08■□□□□ 0.48
RAB40B-201ENST00000269347 LINC00527Q9UJ94 153 aa18.08■□□□□ 0.48
RAB40B-201ENST00000269347 EPDR1Q9UM22 224 aa18.08■□□□□ 0.48
RAB40B-201ENST00000269347 TRAPPC1Q9Y5R8 145 aa18.08■□□□□ 0.48
RAB40B-201ENST00000269347 MAPK1IP1LQ8NDC0 245 aa18.07■□□□□ 0.48
RAB40B-201ENST00000269347 SHANK2-AS3Q9BTD1 123 aa18.07■□□□□ 0.48
RAB40B-201ENST00000269347 Q9H3A6 140 aa18.07■□□□□ 0.48
RAB40B-201ENST00000269347 C1RLQ9NZP8 487 aa18.07■□□□□ 0.48
RAB40B-201ENST00000269347 FBXL7Q9UJT9 491 aa18.07■□□□□ 0.48
RAB40B-201ENST00000269347 CDC42EP3Q9UKI2 254 aa18.07■□□□□ 0.48
RAB40B-201ENST00000269347 TENM4Q6N022 2769 aa18.07■□□□□ 0.48
RAB40B-201ENST00000269347 MRPS12O15235 138 aaKnown RBP18.07■□□□□ 0.48
RAB40B-201ENST00000269347 CA1P00915 261 aaPredicted RBP18.07■□□□□ 0.48
RAB40B-201ENST00000269347 SLC25A5P05141 298 aaKnown RBP18.07■□□□□ 0.48
RAB40B-201ENST00000269347 CTSGP08311 255 aa18.07■□□□□ 0.48
RAB40B-201ENST00000269347 MGST1P10620 155 aaKnown RBP18.07■□□□□ 0.48
RAB40B-201ENST00000269347 MFAP4P55083 255 aa18.07■□□□□ 0.48
RAB40B-201ENST00000269347 Q56UQ5 140 aa18.07■□□□□ 0.48
RAB40B-201ENST00000269347 IL36BQ9NZH7 164 aa18.06■□□□□ 0.48
RAB40B-201ENST00000269347 STXBP6Q8NFX7 210 aa18.06■□□□□ 0.48
RAB40B-201ENST00000269347 CHD6Q8TD26 2715 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms