RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 SP7Q8TDD2 431 aaPredicted RBP4.78□□□□□ -1.64
VCAN-201ENST00000265077 NPIPB5A8MRT5 1133 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 ZG16O60844 167 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 GOLT1AQ6ZVE7 132 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 LINC00305Q7Z4B0 112 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 PPP1R27Q86WC6 154 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 C1orf162Q8NEQ5 155 aaPredicted RBP4.77□□□□□ -1.65
VCAN-201ENST00000265077 PRELID3AQ96N28 172 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 CCL13Q99616 98 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 NABP2Q9BQ15 211 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 hCG_38984A0A1B0GV85 526 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 H7C1H1 209 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 DPM2O94777 84 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 OCC1Q8TAD7 63 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 PRSS8Q16651 343 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 FAM90A9PA6NNJ1 464 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 RRHO14718 337 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 PLAUP00749 431 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 KLF17Q5JT82 389 aaPredicted RBP4.77□□□□□ -1.65
VCAN-201ENST00000265077 ATP5L2Q7Z4Y8 100 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 AKAP13Q12802 2813 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 EFEMP2O95967 443 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 CTSBP07858 339 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 FCGR2BP31994 310 aaPredicted RBP4.77□□□□□ -1.65
VCAN-201ENST00000265077 HGFACQ04756 655 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 ZNF525Q8N782 197 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 LYPD6BQ8NI32 183 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 FABP5P3A8MUU1 101 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 C4orf51C9J302 202 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 TAX1BP3O14907 124 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 IFI27L2Q9H2X8 130 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 ATP5G3P48201 142 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 RHOGP84095 191 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 EGR4Q05215 589 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 GFI1Q99684 422 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 FAM110AQ9BQ89 295 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 PCSK4Q6UW60 755 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 ACP7Q6ZNF0 438 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 KLF14Q8TD94 323 aaPredicted RBP4.77□□□□□ -1.65
VCAN-201ENST00000265077 REPIN1Q9BWE0 567 aaKnown RBP4.77□□□□□ -1.65
VCAN-201ENST00000265077 RNASE7Q9H1E1 156 aaKnown RBP4.77□□□□□ -1.65
VCAN-201ENST00000265077 IGHV4-39P01824 125 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 ITLN1Q8WWA0 313 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 SMPXQ9UHP9 88 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 CENPEQ02224 2701 aa4.77□□□□□ -1.65
VCAN-201ENST00000265077 HBDP02042 147 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 CHAC1Q9BUX1 264 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 NAPSAO96009 420 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 DEFB123Q8N688 67 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 FBXL15Q9H469 300 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 LY96Q9Y6Y9 160 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 CIARTQ8N365 385 aaPredicted RBP4.76□□□□□ -1.65
VCAN-201ENST00000265077 NXT2Q9NPJ8 142 aaKnown RBP4.76□□□□□ -1.65
VCAN-201ENST00000265077 VKORC1L1Q8N0U8 176 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 ZNF784Q8NCA9 323 aaPredicted RBP4.76□□□□□ -1.65
VCAN-201ENST00000265077 TDRG1Q3Y452 100 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 C18orf15Q96N68 181 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 CFHR5Q9BXR6 569 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 ADAMTS20P59510 1910 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 A4D1N5 150 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 AGFG2O95081 481 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 BPTFQ12830 3046 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 C9JCJ5 164 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 CELA2AP08217 269 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 YPEL3P61236 119 aaPredicted RBP4.76□□□□□ -1.65
VCAN-201ENST00000265077 CCL8P80075 99 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 SPSB3Q6PJ21 355 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 C5orf24Q7Z6I8 188 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 MOB4Q9Y3A3 225 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 MRAPQ8TCY5 172 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 LINC00271P0C7V0 271 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 VDAC2P45880 294 aaPredicted RBP4.76□□□□□ -1.65
VCAN-201ENST00000265077 PMS2CLQ68D20 193 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 EEF1AKMT3Q96AZ1 226 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 IL9P15248 144 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 SIGLEC8Q9NYZ4 499 aa4.76□□□□□ -1.65
VCAN-201ENST00000265077 HTN1P15515 57 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 PAX1P15863 534 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 TFF3Q07654 80 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 IFI27L1Q96BM0 104 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 PRSS29PA6NIE9 313 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 COX6A1P12074 109 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 DUX5Q96PT3 197 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 MRPL23Q16540 153 aaKnown RBP4.75□□□□□ -1.65
VCAN-201ENST00000265077 FAM106AQ4KMX7 169 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 ZNF826PQ6ZT77 177 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 FSCN3Q9NQT6 498 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 PSG8Q9UQ74 426 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 IGKV3D-11A0A0A0MRZ8 115 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 NDUFV3P56181 108 aaKnown RBP4.75□□□□□ -1.65
VCAN-201ENST00000265077 ODF1Q14990 250 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 ANXA2RQ3ZCQ2 193 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 NPIPB3Q92617 1050 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 ASCL2Q99929 193 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 LOC101059948A0A1B0GTJ6 334 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 FGF11Q92914 225 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 LINC01549A6NIU2 74 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 C18orf32Q8TCD1 76 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 IGKCP01834 107 aa4.75□□□□□ -1.65
VCAN-201ENST00000265077 SNRPD3P62318 126 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms