RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ARPC5LQ9BPX5 153 aa15.18■□□□□ 0.02
PDLIM2-221ENST00000622702 ARL6Q9H0F7 186 aa15.18■□□□□ 0.02
PDLIM2-221ENST00000622702 SLC45A2Q9UMX9 530 aa15.18■□□□□ 0.02
PDLIM2-221ENST00000622702 BCL2L11O43521 198 aa15.17■□□□□ 0.02
PDLIM2-221ENST00000622702 PSG1P11464 419 aa15.17■□□□□ 0.02
PDLIM2-221ENST00000622702 CAMLGP49069 296 aa15.17■□□□□ 0.02
PDLIM2-221ENST00000622702 C1QL4Q86Z23 238 aa15.17■□□□□ 0.02
PDLIM2-221ENST00000622702 SCGB1C1Q8TD33 95 aa15.17■□□□□ 0.02
PDLIM2-221ENST00000622702 GGTLC1Q9BX51 225 aa15.17■□□□□ 0.02
PDLIM2-221ENST00000622702 CYTL1Q9NRR1 136 aa15.17■□□□□ 0.02
PDLIM2-221ENST00000622702 PUS1Q9Y606 427 aaKnown RBP eCLIP15.17■□□□□ 0.02
PDLIM2-221ENST00000622702 BORCS7-ASMTA0A0B4J1R7 106 aa15.16■□□□□ 0.02
PDLIM2-221ENST00000622702 KANTRA0A1W2PQU2 76 aa15.16■□□□□ 0.02
PDLIM2-221ENST00000622702 LGALS9O00182 355 aa15.16■□□□□ 0.02
PDLIM2-221ENST00000622702 JTBO76095 146 aa15.16■□□□□ 0.02
PDLIM2-221ENST00000622702 CFDP00746 253 aaPredicted RBP15.16■□□□□ 0.02
PDLIM2-221ENST00000622702 OPCMLQ14982 345 aa15.16■□□□□ 0.02
PDLIM2-221ENST00000622702 RPL7L1Q6DKI1 246 aaKnown RBP15.16■□□□□ 0.02
PDLIM2-221ENST00000622702 LAMTOR1Q6IAA8 161 aa15.16■□□□□ 0.02
PDLIM2-221ENST00000622702 TOMM20LQ6UXN7 152 aa15.16■□□□□ 0.02
PDLIM2-221ENST00000622702 REC114Q7Z4M0 266 aa15.16■□□□□ 0.02
PDLIM2-221ENST00000622702 OR51G1Q8NGK1 321 aa15.16■□□□□ 0.02
PDLIM2-221ENST00000622702 TMEM190Q8WZ59 177 aa15.16■□□□□ 0.02
PDLIM2-221ENST00000622702 NPCDR1Q9BY65 106 aa15.16■□□□□ 0.02
PDLIM2-221ENST00000622702 NKX2-5P52952 324 aaPredicted RBP15.15■□□□□ 0.02
PDLIM2-221ENST00000622702 SYNJ2BPP57105 145 aa15.15■□□□□ 0.02
PDLIM2-221ENST00000622702 UNQ9165/PRO28630Q6UXU0 137 aa15.15■□□□□ 0.02
PDLIM2-221ENST00000622702 TMEM182Q6ZP80 229 aaPredicted RBP15.15■□□□□ 0.02
PDLIM2-221ENST00000622702 DLX4Q92988 240 aaPredicted RBP15.15■□□□□ 0.02
PDLIM2-221ENST00000622702 ZFAND3Q9H8U3 227 aa15.15■□□□□ 0.02
PDLIM2-221ENST00000622702 YIF1AO95070 293 aa15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 RPL29P47914 159 aaKnown RBP15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 PRR20EP86478 221 aa15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 PRR20CP86479 221 aa15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 PRR20DP86480 221 aa15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 PRR20BP86481 221 aa15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 PRR20AP86496 221 aa15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 LINC00482Q8N8I6 264 aa15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 BPIFCQ8NFQ6 507 aa15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 RCC1LQ96I51 464 aaKnown RBP15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 WI2-2373I1.2A0A1W2PRP0 233 aa15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 A8MWP6 167 aa15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 BOLA2-SMG1P6H3BVE0 249 aa15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 GATA2P23769 480 aaPredicted RBP15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 ZNF709Q8N972 641 aa15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 PPP1R14BQ96C90 147 aa15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 KCNIP2Q9NS61 270 aa15.14■□□□□ 0.01
PDLIM2-221ENST00000622702 ZNF320A2RRD8 509 aa15.13■□□□□ 0.01
PDLIM2-221ENST00000622702 C17orf112F2Z3M2 114 aa15.13■□□□□ 0.01
PDLIM2-221ENST00000622702 IL4P05112 153 aa15.13■□□□□ 0.01
PDLIM2-221ENST00000622702 LINC00869P0C866 280 aa15.13■□□□□ 0.01
PDLIM2-221ENST00000622702 CD33P20138 364 aa15.13■□□□□ 0.01
PDLIM2-221ENST00000622702 ELLP55199 621 aaPredicted RBP15.13■□□□□ 0.01
PDLIM2-221ENST00000622702 STPG3Q8N7X2 389 aa15.13■□□□□ 0.01
PDLIM2-221ENST00000622702 RNF125Q96EQ8 232 aa15.13■□□□□ 0.01
PDLIM2-221ENST00000622702 RSG1Q9BU20 258 aa15.13■□□□□ 0.01
PDLIM2-221ENST00000622702 ARV1Q9H2C2 271 aa15.13■□□□□ 0.01
PDLIM2-221ENST00000622702 UFC1Q9Y3C8 167 aa15.13■□□□□ 0.01
PDLIM2-221ENST00000622702 TIMM9Q9Y5J7 89 aa15.13■□□□□ 0.01
PDLIM2-221ENST00000622702 K7EMT4 169 aa15.12■□□□□ 0.01
PDLIM2-221ENST00000622702 PLP1P60201 277 aa15.12■□□□□ 0.01
PDLIM2-221ENST00000622702 MIC13Q5XKP0 118 aa15.12■□□□□ 0.01
PDLIM2-221ENST00000622702 HSD17B11Q8NBQ5 300 aa15.12■□□□□ 0.01
PDLIM2-221ENST00000622702 WFDC9Q8NEX5 89 aa15.12■□□□□ 0.01
PDLIM2-221ENST00000622702 OR9G4Q8NGQ1 327 aa15.12■□□□□ 0.01
PDLIM2-221ENST00000622702 GINS3Q9BRX5 216 aa15.12■□□□□ 0.01
PDLIM2-221ENST00000622702 C20orf24Q9BUV8 137 aa15.12■□□□□ 0.01
PDLIM2-221ENST00000622702 ZNF471Q9BX82 626 aaPredicted RBP15.12■□□□□ 0.01
PDLIM2-221ENST00000622702 PXMP4Q9Y6I8 212 aa15.12■□□□□ 0.01
PDLIM2-221ENST00000622702 OVOL1O14753 267 aa15.11■□□□□ 0.01
PDLIM2-221ENST00000622702 C4BPBP20851 252 aa15.11■□□□□ 0.01
PDLIM2-221ENST00000622702 B2MP61769 119 aa15.11■□□□□ 0.01
PDLIM2-221ENST00000622702 USF2Q15853 346 aaPredicted RBP15.11■□□□□ 0.01
PDLIM2-221ENST00000622702 PXDC1Q5TGL8 231 aa15.11■□□□□ 0.01
PDLIM2-221ENST00000622702 PSMG3Q9BT73 122 aaPredicted RBP15.11■□□□□ 0.01
PDLIM2-221ENST00000622702 DAZ1Q9NQZ3 744 aaKnown RBP15.11■□□□□ 0.01
PDLIM2-221ENST00000622702 SLC39A9Q9NUM3 307 aa15.11■□□□□ 0.01
PDLIM2-221ENST00000622702 PEMTQ9UBM1 199 aa15.11■□□□□ 0.01
PDLIM2-221ENST00000622702 IGHV3OR16-8A0A075B7F1 116 aa15.1■□□□□ 0.01
PDLIM2-221ENST00000622702 TMEM213A2RRL7 107 aa15.1■□□□□ 0.01
PDLIM2-221ENST00000622702 HNRNPCP07910 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
PDLIM2-221ENST00000622702 ATP6V0CP27449 155 aa15.1■□□□□ 0.01
PDLIM2-221ENST00000622702 LYZP61626 148 aa15.1■□□□□ 0.01
PDLIM2-221ENST00000622702 EIF5AP63241 154 aaKnown RBP15.1■□□□□ 0.01
PDLIM2-221ENST00000622702 GNPNAT1Q96EK6 184 aaPredicted RBP15.1■□□□□ 0.01
PDLIM2-221ENST00000622702 NOTCH1P46531 2555 aa15.1■□□□□ 0.01
PDLIM2-221ENST00000622702 MEGF8Q7Z7M0 2845 aa15.09■□□□□ 0.01
PDLIM2-221ENST00000622702 TM4SF20Q53R12 229 aa15.09■□□□□ 0.01
PDLIM2-221ENST00000622702 Q6ZRG5 221 aa15.09■□□□□ 0.01
PDLIM2-221ENST00000622702 STOML3Q8TAV4 291 aa15.09■□□□□ 0.01
PDLIM2-221ENST00000622702 PBDC1Q9BVG4 233 aa15.09■□□□□ 0.01
PDLIM2-221ENST00000622702 IL34Q6ZMJ4 242 aa15.08■□□□□ 0.01
PDLIM2-221ENST00000622702 SLC51BQ86UW2 128 aa15.08■□□□□ 0.01
PDLIM2-221ENST00000622702 OR2G3Q8NGZ4 309 aa15.08■□□□□ 0.01
PDLIM2-221ENST00000622702 METTL26Q96S19 204 aa15.08■□□□□ 0.01
PDLIM2-221ENST00000622702 MRPL27Q9P0M9 148 aaKnown RBP15.08■□□□□ 0.01
PDLIM2-221ENST00000622702 NOTCH3Q9UM47 2321 aa15.08■□□□□ 0
PDLIM2-221ENST00000622702 C2orf70A6NJV1 201 aa15.08■□□□□ 0
PDLIM2-221ENST00000622702 G3V4G9 280 aa15.08■□□□□ 0
PDLIM2-221ENST00000622702 HYPMO75409 117 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms