RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ELOVL3Q9HB03 270 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 WFDC1Q9HC57 220 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 C1orf123Q9NWV4 160 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 P2RX2Q9UBL9 471 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 UQCR10Q9UDW1 63 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 NAGKQ9UJ70 344 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 ZNF256Q9Y2P7 627 aaPredicted RBP4.02□□□□□ -1.77
SF3B3-214ENST00000572365 A0A0J9YWU9 116 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 FAM230AA0A1W2PPH8 454 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 XKRY2A2RUG3 117 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 A6NDX4 124 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 FAM183AA6NL82 134 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 RIIAD1A6NNX1 92 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 KRTAP16-1A8MUX0 517 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 SERPINE3A8MV23 424 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 ZNF736B4DX44 427 aaPredicted RBP4.01□□□□□ -1.77
SF3B3-214ENST00000572365 H3BSH0 61 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 J3QR89 54 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 J3QRE1 110 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 HPRT1P00492 218 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 IFNA1P01562 189 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 BCHEP06276 602 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 FUT1P19526 365 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 GABRA2P47869 451 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 OR1E2P47887 323 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 RPL29P47914 159 aaKnown RBP4.01□□□□□ -1.77
SF3B3-214ENST00000572365 CDC34P49427 236 aaPredicted RBP4.01□□□□□ -1.77
SF3B3-214ENST00000572365 TPPP2P59282 170 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 HLA-DRB3P79483 266 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 DHRS2Q13268 280 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 ZNF266Q14584 549 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 CDK5R1Q15078 307 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 SMIM21Q3B7S5 101 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 ABCA11PQ4W5N1 156 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 TMEM128Q5BJH2 165 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 LDLRAD2Q5SZI1 272 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 KCNIP4Q6PIL6 250 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 TSEN54Q7Z6J9 526 aaKnown RBP4.01□□□□□ -1.77
SF3B3-214ENST00000572365 ZNF440Q8IYI8 595 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 Q8N2B8 174 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 KLHL30-AS1Q8NEE0 82 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 OR5D18Q8NGL1 313 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 GHSRQ92847 366 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 SLC25A44Q96H78 314 aaPredicted RBP4.01□□□□□ -1.77
SF3B3-214ENST00000572365 C2orf50Q96LR7 162 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 CHCHD5Q9BSY4 110 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 CABLES2Q9BTV7 478 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 VAMP8Q9BV40 100 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 SELENOIQ9C0D9 397 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 CST11Q9H112 138 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 RBKSQ9H477 322 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 AUNIPQ9H7T9 357 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 BCL2L10Q9HD36 194 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 PSG11Q9UQ72 335 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 RBM7Q9Y580 266 aaKnown RBP4.01□□□□□ -1.77
SF3B3-214ENST00000572365 HILPDAQ9Y5L2 63 aa4.01□□□□□ -1.77
SF3B3-214ENST00000572365 MAP1LC3B2A6NCE7 125 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 RBFOX3A6NFN3 312 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 ZNF705FA8MVS1 300 aaPredicted RBP4□□□□□ -1.77
SF3B3-214ENST00000572365 H3BQ15 152 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 SOX14O95416 240 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 PRH1P02810 166 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 TRGC2P03986 189 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 ARG1P05089 322 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 SNRPCP09234 159 aaKnown RBP4□□□□□ -1.77
SF3B3-214ENST00000572365 OR10J4P0C629 311 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 OR8U9P0C7N5 309 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 OR9G9P0C7N8 305 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 ZNF705DP0CH99 300 aaPredicted RBP4□□□□□ -1.77
SF3B3-214ENST00000572365 ZNF705BP0CI00 300 aaPredicted RBP4□□□□□ -1.77
SF3B3-214ENST00000572365 SMIM17P0DL12 118 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 PRDX2P32119 198 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 CEACAM3P40198 252 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 AQP2P41181 271 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 ATP1B3P54709 279 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 LCN6P62502 163 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 RPL23AP62750 156 aaKnown RBP4□□□□□ -1.77
SF3B3-214ENST00000572365 IL24Q13007 206 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 ARL6IP1Q15041 203 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 PCK2Q16822 640 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 COX19Q49B96 90 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 ZNF429Q86V71 674 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 Q8N377 158 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 NOXO1Q8NFA2 376 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 OR51D1Q8NGF3 324 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 OR52B4Q8NGK2 314 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 OR4D5Q8NGN0 318 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 OR4S2Q8NH73 311 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 ISOC2Q96AB3 205 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 GNPNAT1Q96EK6 184 aaPredicted RBP4□□□□□ -1.77
SF3B3-214ENST00000572365 CIB3Q96Q77 187 aaPredicted RBP4□□□□□ -1.77
SF3B3-214ENST00000572365 OR8B4Q96RC9 309 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 ST6GALNAC5Q9BVH7 336 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 MAP1LC3BQ9GZQ8 125 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 JPT2Q9H910 190 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 CYTL1Q9NRR1 136 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 SLC35D1Q9NTN3 355 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 MRPL27Q9P0M9 148 aaKnown RBP4□□□□□ -1.77
SF3B3-214ENST00000572365 ZNF391Q9UJN7 358 aa4□□□□□ -1.77
SF3B3-214ENST00000572365 MRPS16Q9Y3D3 137 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms