RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 RHPN1-AS1Q9BWJ2 59 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 C20orf27Q9GZN8 174 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 MS4A6AQ9H2W1 248 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 RERGLQ9H628 205 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 TAF9BQ9HBM6 251 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 S100A14Q9HCY8 104 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 FGF20Q9NP95 211 aaPredicted RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 TMEM138Q9NPI0 162 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 GPR173Q9NS66 373 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 SLC35D1Q9NTN3 355 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 FKBP11Q9NYL4 201 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 C21orf62Q9NYP8 219 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 DNAJC27Q9NZQ0 273 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 CCDC167Q9P0B6 97 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 PSORS1C2Q9UIG4 136 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 TRAPPC2LQ9UL33 140 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 MRPS7Q9Y2R9 242 aaKnown RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 FIS1Q9Y3D6 152 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 LY96Q9Y6Y9 160 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 MUC12Q9UKN1 5478 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 NEBP20929 6669 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 IGHV3OR16-12A0A075B7B8 117 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 TRAV30A0A087WSZ9 112 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 TRBV6-7A0A0A0MS04 114 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 TRAV8-3A0A0A6YYJ7 113 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 TRBV7-9A0A0J9YWB2 115 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 IGLC7A0M8Q6 106 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 PLAC8L1A1L4L8 177 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 ZNF320A2RRD8 509 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 SNTNA6NMZ2 147 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 OR4C45A6NMZ5 311 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 IBA57-AS1B1ANH7 110 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 C9JCJ5 164 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 ZNF670-ZNF695F2Z2N8 137 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 H7C2Y5 167 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 J3QRE1 110 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 GABRPO00591 440 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 ISLRO14498 428 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 CCNB2O95067 398 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 DUSP14O95147 198 aaKnown RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 SOX14O95416 240 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 CFDP00746 253 aaPredicted RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 HRASP01112 189 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 INSP01308 110 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 MAS1P04201 325 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 CTSGP08311 255 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 FCGR3AP08637 254 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 NMBP08949 121 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 OCM2P0CE71 109 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 OCMP0CE72 109 aaPredicted RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 SAA1P0DJI8 122 aaPredicted RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 HLA-GP17693 338 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 CXCL2P19875 107 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 ID1P41134 155 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 ASIPP42127 132 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 RPS27P42677 84 aaKnown RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 RPL27AP46776 148 aaKnown RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 NPBWR1P48145 328 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 FHITP49789 147 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 NUDT2P50583 147 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 ATP5IP56385 69 aaPredicted RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 DEFB131AP59861 70 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 OR2B8PP59922 312 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 CXCR4P61073 352 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 SNRPGP62308 76 aaKnown RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 MRPS15P82914 257 aaKnown RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 CBX1P83916 185 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 RPL19P84098 196 aaKnown RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 RCN1Q15293 331 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 RSU1Q15404 277 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 ZSCAN26Q16670 478 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 TPRXLQ17RH7 258 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 LINC01620Q4KN68 170 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 AARDQ4LEZ3 155 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 LRRC23Q53EV4 343 aaPredicted RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 ACSM3Q53FZ2 586 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 UBE2UQ5VVX9 321 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 OTPQ5XKR4 325 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 SFXN4Q6P4A7 337 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 TBPL2Q6SJ96 375 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 SSX9Q7RTT3 188 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 VTCN1Q7Z7D3 282 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 LHFPL3Q86UP9 236 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 CMTM1Q8IZ96 169 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 C14orf178Q8N769 122 aaPredicted RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 ZNF680Q8NEM1 530 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 OR5T1Q8NG75 326 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 OR8D4Q8NGM9 314 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 OR2G2Q8NGZ5 317 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 OR52E5Q8NH55 327 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 RFESDQ8TAC1 157 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 CIRBP-AS1Q8TBR5 109 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 RNASE8Q8TDE3 154 aaKnown RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 THEM6Q8WUY1 208 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 RMI2Q96E14 147 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 GNPNAT1Q96EK6 184 aaPredicted RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 ADAT3Q96EY9 351 aaPredicted RBP0.91□□□□□ -2.26
CD44-212ENST00000524922 PYURFQ96I23 114 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 GPR82Q96P67 336 aa0.91□□□□□ -2.26
CD44-212ENST00000524922 S100A13Q99584 98 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms