RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 MOB4Q9Y3A3 225 aa2.4□□□□□ -2.03
PVT1-202ENST00000512617 CSAG2Q9Y5P2 127 aa2.4□□□□□ -2.03
PVT1-202ENST00000512617 LRRK1Q38SD2 2015 aa2.4□□□□□ -2.03
PVT1-202ENST00000512617 TTC28Q96AY4 2481 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 IGHV3-72A0A0B4J1Y9 119 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 IGHV3-66A0A0C4DH42 116 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 IGKV1-6A0A0C4DH72 117 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 A0A1B0GW54 56 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 IRGMA1A4Y4 181 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 ARRDC5A6NEK1 342 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 IFITM5A6NNB3 132 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 BBIP1A8MTZ0 92 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 A8MWL6 223 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 C1orf196B1AJZ1 125 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 C9JCJ5 164 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 BMPR1BO00238 502 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 CCL25O15444 150 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 OR2T1O43869 369 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 PGLYRP1O75594 196 aaPredicted RBP2.39□□□□□ -2.03
PVT1-202ENST00000512617 CST7O76096 145 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 IGKV1-39P01597 117 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 IGHV3-13P01766 116 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 IGKV1D-39P04432 117 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 APODP05090 189 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 ZNF688P0C7X2 276 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 FABP2P12104 132 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 ZNF823P16415 610 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 LGALS3P17931 250 aaKnown RBP2.39□□□□□ -2.03
PVT1-202ENST00000512617 S100A4P26447 101 aaKnown RBP2.39□□□□□ -2.03
PVT1-202ENST00000512617 ZNF80P51504 273 aaPredicted RBP2.39□□□□□ -2.03
PVT1-202ENST00000512617 RPL30P62888 115 aaKnown RBP2.39□□□□□ -2.03
PVT1-202ENST00000512617 BSPH1Q075Z2 132 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 CCSMST1Q4G0I0 132 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 NCMAPQ5T1S8 102 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 RPL22L1Q6P5R6 122 aaKnown RBP2.39□□□□□ -2.03
PVT1-202ENST00000512617 TMEM14EPQ6UXP3 125 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 GTF2H5Q6ZYL4 71 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 LINC00305Q7Z4B0 112 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 NR2C2APQ86WQ0 139 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 SNX29P2Q8IUI4 249 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 MSRB3Q8IXL7 192 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 Q8N1X5 172 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 PACRGLQ8N7B6 248 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.39□□□□□ -2.03
PVT1-202ENST00000512617 OR10G2Q8NGC3 310 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 OR4K13Q8NH42 304 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 KRTAP9-9Q9BYP9 154 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 KRTAP9-4Q9BYQ2 154 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 RNF122Q9H9V4 155 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 ZNF286AQ9HBT8 521 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 CBLN4Q9NTU7 201 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 BOKQ9UMX3 212 aaPredicted RBP2.39□□□□□ -2.03
PVT1-202ENST00000512617 MYH9P35579 1960 aaKnown RBP2.39□□□□□ -2.03
PVT1-202ENST00000512617 TCF20Q9UGU0 1960 aaKnown RBP2.39□□□□□ -2.03
PVT1-202ENST00000512617 BRWD1Q9NSI6 2320 aa2.39□□□□□ -2.03
PVT1-202ENST00000512617 IGHV3OR15-7A0A075B7D8 119 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 IGKV1D-43A0A0B4J1Z2 117 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 IGHV7-4-1A0A0J9YVY3 117 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 LOC100130705A0A1B0GUX0 176 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 ZNF670-ZNF695F2Z2N8 137 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 LY6G6DO95868 133 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 NCR2O95944 276 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 NAPSAO96009 420 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 AMBPP02760 352 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 HSPB1P04792 205 aaKnown RBP2.38□□□□□ -2.03
PVT1-202ENST00000512617 HLA-EP13747 358 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 PLA2G2AP14555 144 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 ZNF32P17041 273 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 ATP6V0CP27449 155 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 SRP14P37108 136 aaKnown RBP2.38□□□□□ -2.03
PVT1-202ENST00000512617 TMBIM6P55061 237 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 FGF12P61328 243 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 CCL20P78556 96 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 CDK6Q00534 326 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 MYO9BQ13459 2157 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 HES1Q14469 280 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 IL17AQ16552 155 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 FAM78AQ5JUQ0 283 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 CGB2Q6NT52 195 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 TRAPPC6BQ86SZ2 158 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 H1FOOQ8IZA3 346 aaPredicted RBP2.38□□□□□ -2.03
PVT1-202ENST00000512617 TMEM256Q8N2U0 113 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 RPP25LQ8N5L8 163 aaKnown RBP2.38□□□□□ -2.03
PVT1-202ENST00000512617 C11orf42Q8N5U0 333 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 C20orf203Q8NBC4 194 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 BRK1Q8WUW1 75 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 DEDD2Q8WXF8 326 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 PP6455Q8WZ26 134 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 MAL2Q969L2 176 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 ZNF799Q96GE5 643 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 ZC2HC1AQ96GY0 325 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 ZNF414Q96IQ9 312 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 MGLLQ99685 303 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 PYGO2Q9BRQ0 406 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 HDHD3Q9BSH5 251 aaPredicted RBP2.38□□□□□ -2.03
PVT1-202ENST00000512617 TSSK6Q9BXA6 273 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 TMEM191AQ9H0A3 160 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 CXCL16Q9H2A7 254 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 RERGLQ9H628 205 aa2.38□□□□□ -2.03
PVT1-202ENST00000512617 C8orf17Q9NRJ1 99 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms