RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 CHST1O43916 411 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 NUPR1O60356 82 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 FCGR3BO75015 233 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 CRLF1O75462 422 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 SLC25A14O95258 325 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 CPMP14384 443 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 AQP1P29972 269 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 IER3P46695 156 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 CRYBA2P53672 197 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 TMEM50BP56557 158 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 TAS2R45P59539 299 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 RPS15AP62244 130 aaKnown RBP3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 SERF2P84101 59 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 HSPB3Q12988 150 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 FAM53BQ14153 422 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 DIAPH2-AS1Q14236 149 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 CLEC12BQ2HXU8 276 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 Q56UQ5 140 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 SLC25A47Q6Q0C1 308 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 Q6ZT83 130 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 LINC00336Q6ZUF6 198 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 SPATA12Q7Z6I5 190 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 ATOH7Q8N100 152 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 TMEM86BQ8N661 226 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 OTOSQ8NHW6 89 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 RPS4Y2Q8TD47 263 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 GTSF1Q8WW33 167 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 COPS9Q8WXC6 57 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 RASL10AQ92737 203 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 ADAT3Q96EY9 351 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 TIMD4Q96H15 378 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 PRELID3AQ96N28 172 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 LINC01587Q99440 93 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 C20orf78Q9BR46 151 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 CLEC7AQ9BXN2 247 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 SLC25A39Q9BZJ4 359 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 IMUPQ9GZP8 106 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 GNB4Q9HAV0 340 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 FGF22Q9HCT0 170 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 BCL2L10Q9HD36 194 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 PHPT1Q9NRX4 125 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 SHROOM3Q8TF72 1996 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 KMT2EQ8IZD2 1858 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 HTTP42858 3142 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 VWA8A3KMH1 1905 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 PIKFYVEQ9Y2I7 2098 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 TNRC6AQ8NDV7 1962 aaKnown RBP3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 IGHV4-4A0A075B6R2 117 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 A0A087WW49 117 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 C3orf85A0A1B0GTC6 90 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 SNURFLB1AK76 121 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 E9PLD3 99 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 C11orf98E9PRG8 122 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 SLC17A2O00624 439 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 DUSP14O95147 198 aaKnown RBP3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 CPSF4O95639 269 aaKnown RBP3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 CD55P08174 381 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 IGLC6P0CF74 106 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 IL9P15248 144 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 BCL3P20749 454 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 OPRK1P41145 380 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 PTGDSP41222 190 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 HERVK_113P63121 156 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 ZNF90Q03938 601 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 PHLDA2Q53GA4 152 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 KLF17Q5JT82 389 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 FAM53AQ6NSI3 398 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 NOXRED1Q6NXP6 359 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 MOB3BQ86TA1 216 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 TEN1Q86WV5 123 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 STHQ8IWL8 128 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 SLC22A18ASQ8N1D0 253 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 FGFRL1Q8N441 504 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 RAB42Q8N4Z0 105 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 C3orf22Q8N5N4 141 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 ZNF645Q8N7E2 425 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 APOBEC4Q8WW27 367 aaKnown RBP3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 CHCHD1Q96BP2 118 aaKnown RBP3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 NEURL3Q96EH8 262 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 LINC00526Q96FQ7 95 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 COX14Q96I36 57 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 AMELYQ99218 206 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 OPRPNQ99935 248 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 NAA38Q9BRA0 125 aaKnown RBP3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 APOOQ9BUR5 198 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 TMEM147Q9BVK8 224 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 FBXL15Q9H469 300 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 EDA2RQ9HAV5 297 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 IL36BQ9NZH7 164 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 CKLFQ9UBR5 152 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 TMED7Q9Y3B3 224 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 CHCHD2Q9Y6H1 151 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 LY96Q9Y6Y9 160 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 R4GN57 208 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 NINQ8N4C6 2090 aa3.67□□□□□ -1.82
HMGB3P13-201ENST00000511263 A0A087X0K7 114 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 TMED7-TICAM2A0A0A6YYA0 188 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 LOC101059948A0A1B0GTJ6 334 aa3.66□□□□□ -1.82
HMGB3P13-201ENST00000511263 M0R2P5 195 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms