RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 RNF2Q99496 336 aa3.58□□□□□ -1.84
UBE2D3-217ENST00000504211 AGMATQ9BSE5 352 aa3.58□□□□□ -1.84
UBE2D3-217ENST00000504211 SEC11CQ9BY50 192 aa3.58□□□□□ -1.84
UBE2D3-217ENST00000504211 MRPL37Q9BZE1 423 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-217ENST00000504211 LINC00574Q9H8X3 128 aa3.58□□□□□ -1.84
UBE2D3-217ENST00000504211 WFDC1Q9HC57 220 aa3.58□□□□□ -1.84
UBE2D3-217ENST00000504211 UQCC1Q9NVA1 299 aa3.58□□□□□ -1.84
UBE2D3-217ENST00000504211 CARHSP1Q9Y2V2 147 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-217ENST00000504211 AKAP13Q12802 2813 aa3.58□□□□□ -1.84
UBE2D3-217ENST00000504211 USF3Q68DE3 2245 aa3.58□□□□□ -1.84
UBE2D3-217ENST00000504211 BTBD17A6NE02 478 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 DPRXA6NFQ7 191 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 ZNF729A6NN14 1252 aaPredicted RBP3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 RNASEK-C17orf49H0YIS7 233 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 RAB29O14966 203 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 RBFOX2O43251 390 aaKnown RBP eCLIP3.57□□□□□ -1.841e-7■□□□□ 10
UBE2D3-217ENST00000504211 TMEM50AO95807 157 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 HPRT1P00492 218 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 APOC3P02656 99 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 OPN1MWP04001 364 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 OPN1MW2P0DN77 364 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 OPN1MW3P0DN78 364 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 ATP6V0CP27449 155 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 SSTR5P35346 364 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 SNCAP37840 140 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 RPL13AP40429 203 aaKnown RBP3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 RAB7AP51149 207 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 DYNLT3P51808 116 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 AKR1C2P52895 323 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 RPL30P62888 115 aaKnown RBP3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 HBG1P69891 147 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 HBG2P69892 147 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 PEA15Q15121 130 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 ATP6V1FQ16864 119 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 FBXL19-AS1Q494R0 122 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 SVBPQ8N300 66 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 OR5C1Q8NGR4 320 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 ATP5SQ99766 215 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 PSMG3Q9BT73 122 aaPredicted RBP3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 SMIM3Q9BZL3 60 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 PARP12Q9H0J9 701 aaKnown RBP3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 OR2D2Q9H210 308 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 C19orf12Q9NSK7 152 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 PSENENQ9NZ42 101 aa3.57□□□□□ -1.84
UBE2D3-217ENST00000504211 CNOT1A5YKK6 2376 aaKnown RBP3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 FAM186AA6NE01 2351 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 ARFGEF3Q5TH69 2177 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 BSNQ9UPA5 3926 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 SPENQ96T58 3664 aaKnown RBP3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 TRGV10A0A0A0MS01 117 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 TRAV38-1A0A0B4J264 116 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 KBTBD11-OT1A0A1B0GTJ5 212 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 F8W036 122 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 SOX15O60248 233 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 RAMP3O60896 148 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 SCO1O75880 301 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 CST7O76096 145 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 FSTL3O95633 263 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 IFNA5P01569 189 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 HBE1P02100 147 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 ADCYAP1P18509 176 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 OMGP23515 440 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 PPP1CCP36873 323 aaKnown RBP3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 RAB2AP61019 212 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 UBE2KP61086 200 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 HERVK_113P61574 105 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 SERF2P84101 59 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 DEFA5Q01523 94 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 MEF2CQ06413 473 aaPredicted RBP3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 TNFRSF9Q07011 255 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 BSPH1Q075Z2 132 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 EDDM3AQ14507 147 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 PSG5Q15238 335 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 GUK1Q16774 197 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 LRRC75BQ2VPJ9 315 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 Q3ZCU0 254 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 SPRNQ5BIV9 151 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 NCMAPQ5T1S8 102 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 TMEM14EPQ6UXP3 125 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 Q6ZN92 141 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 H2BFWTQ7Z2G1 175 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 PUSL1Q8N0Z8 303 aaKnown RBP3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 HSD17B11Q8NBQ5 300 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 OR2G3Q8NGZ4 309 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 OR52E5Q8NH55 327 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 UBALD1Q8TB05 177 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 C17orf50Q8WW18 174 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 RBMXL1Q96E39 390 aaKnown RBP3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 NARS2Q96I59 477 aaKnown RBP3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 ADTRPQ96IZ2 230 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 GAFA1Q96PS6 74 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 CIB3Q96Q77 187 aaPredicted RBP3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 PBDC1Q9BVG4 233 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 SCRT1Q9BWW7 348 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 NKX6-2Q9C056 277 aaPredicted RBP3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 TREM1Q9NP99 234 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 CALYQ9NYX4 217 aa3.56□□□□□ -1.84
UBE2D3-217ENST00000504211 IDI2-AS1Q9NZ38 188 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms