RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 CHRDL1Q9BU40 450 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 VSIRQ9H7M9 311 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 MLXQ9UH92 298 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 KLK9Q9UKQ9 250 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 HILPDAQ9Y5L2 63 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 TRAV9-1A0A075B6T8 112 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 IGHV1-69DA0A0B4J2H0 117 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 A0A1B0GV50 99 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 A0A1W2PRD5 423 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 A0A1W2PRF3 423 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 A0A1W2PRM7 423 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 FBLL1A6NHQ2 334 aaKnown RBP5.06□□□□□ -1.6
SF3A3-208ENST00000489537 C1orf196B1AJZ1 125 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 TEX22C9J3V5 150 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 C9JCJ5 164 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 H3BUA1 57 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 DNASE2O00115 360 aaPredicted RBP5.06□□□□□ -1.6
SF3A3-208ENST00000489537 OR7C2O60412 319 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 PAGE4O60829 102 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 YIF1AO95070 293 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 OR2C1O95371 312 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 BRI3O95415 125 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 IGHV1-69P01742 117 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 ARL14EPLP0DKL9 152 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 ZFP36P26651 326 aaKnown RBP5.06□□□□□ -1.6
SF3A3-208ENST00000489537 CEBPGP53567 150 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 FGF8P55075 233 aaPredicted RBP5.06□□□□□ -1.6
SF3A3-208ENST00000489537 TIGITQ495A1 244 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 COX19Q49B96 90 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 AKIRIN2Q53H80 203 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 FAM90A2PQ658T7 463 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 LYPD1Q8N2G4 141 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 LINC01356Q8N9X3 169 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 SGMS2Q8NHU3 365 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 Q8WTZ3 238 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 HIST1H2BAQ96A08 127 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 C11orf52Q96A22 123 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 TBX15Q96SF7 602 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 MEGF9Q9H1U4 602 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 SDF2L1Q9HCN8 221 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 ZNRD1Q9P1U0 126 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 ZNF580Q9UK33 172 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 MOB4Q9Y3A3 225 aa5.06□□□□□ -1.6
SF3A3-208ENST00000489537 YLPM1P49750 1951 aaKnown RBP5.05□□□□□ -1.6
SF3A3-208ENST00000489537 SERTM2A0A1B0GWG4 89 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 C9JQL5 133 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 NPIPB6E9PJ23 425 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 K7EQM0 130 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 GNG7O60262 68 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 SCO1O75880 301 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 NDUFB8O95169 186 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 TOMM40O96008 361 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 RD3LP0DJH9 198 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 ATF4P18848 351 aaPredicted RBP5.05□□□□□ -1.6
SF3A3-208ENST00000489537 SAA4P35542 130 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 SRP14P37108 136 aaKnown RBP5.05□□□□□ -1.6
SF3A3-208ENST00000489537 MEOX2P50222 304 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 TAS2R60P59551 318 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 CD81P60033 236 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 CX3CL1P78423 397 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 LOXL1Q08397 574 aaPredicted RBP5.05□□□□□ -1.6
SF3A3-208ENST00000489537 SCGB2A2Q13296 93 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 CLEC12BQ2HXU8 276 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 LHFPL4Q7Z7J7 247 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 C1QL4Q86Z23 238 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.05□□□□□ -1.6
SF3A3-208ENST00000489537 FAM110DQ8TAY7 271 aaPredicted RBP5.05□□□□□ -1.6
SF3A3-208ENST00000489537 AJUBAQ96IF1 538 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 GPR82Q96P67 336 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 PAXXQ9BUH6 204 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 PARLQ9H300 379 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 OR51M1Q9H341 326 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 SAV1Q9H4B6 383 aaPredicted RBP5.05□□□□□ -1.6
SF3A3-208ENST00000489537 SEPSECSQ9HD40 501 aaKnown RBP5.05□□□□□ -1.6
SF3A3-208ENST00000489537 TMEM14CQ9P0S9 112 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 HIGD1AQ9Y241 93 aa5.05□□□□□ -1.6
SF3A3-208ENST00000489537 DOCK11Q5JSL3 2073 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 NIPBLQ6KC79 2804 aaeCLIP5.04□□□□□ -1.6
SF3A3-208ENST00000489537 TRBV7-1A0A0A6YYK4 115 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 CENPVL3A0A0U1RRI6 287 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 MDFIC2A0A1B0GVS7 189 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 CGB1A6NKQ9 187 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 FAM223BA6NKX1 122 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 H7BYZ3 331 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 I3L2K1 104 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 NUPL2O15504 423 aaKnown RBP5.04□□□□□ -1.6
SF3A3-208ENST00000489537 NDUFS7O75251 213 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 S100A6P06703 90 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 CNN1P51911 297 aaKnown RBP5.04□□□□□ -1.6
SF3A3-208ENST00000489537 CRIP2P52943 208 aaPredicted RBP5.04□□□□□ -1.6
SF3A3-208ENST00000489537 UBE2L3P68036 154 aaKnown RBP5.04□□□□□ -1.6
SF3A3-208ENST00000489537 RELQ04864 619 aaPredicted RBP5.04□□□□□ -1.6
SF3A3-208ENST00000489537 PDE6HQ13956 83 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 MRGPRG-AS1Q2M3A8 158 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 ATRAIDQ6UW56 229 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 BPIFA4PQ86YQ2 179 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 FAM223AQ8IWN6 122 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 NECAP1Q8NC96 275 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 OR4F17Q8NGA8 305 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 OR5AU1Q8NGC0 362 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms