RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 IFNA7P01567 189 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 MAS1P04201 325 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 HMGN2P05204 90 aaKnown RBP2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 FAM236CP0DP71 79 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 S100A2P29034 98 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR10J1P30954 320 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 CA7P43166 264 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 SNRPD2P62316 118 aaKnown RBP2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 HERVK_113P63121 156 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 CDK6Q00534 326 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 DEFA6Q01524 100 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 IBA57Q5T440 356 aaKnown RBP2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 PRNTQ86SH4 94 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 GKN2Q86XP6 184 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 C15orf56Q8N910 161 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 BPIFB6Q8NFQ5 453 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR2M7Q8NG81 312 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR52R1Q8NGF1 315 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR5A1Q8NGJ0 315 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNRF2Q8NHG8 242 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 PFN4Q8NHR9 129 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 LHFPL5Q8TAF8 219 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 FRZBQ92765 325 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 GPR146Q96CH1 333 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 PYURFQ96I23 114 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 NARS2Q96I59 477 aaKnown RBP2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 CCDC115Q96NT0 180 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF436Q9C0F3 470 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 PBOV1Q9GZY1 135 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 GTSF1LQ9H1H1 148 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 RERGLQ9H628 205 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 MED29Q9NX70 200 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 C21orf62Q9NYP8 219 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 CELA1Q9UNI1 258 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF706Q9Y5V0 76 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 DNAJC13O75165 2243 aa2.47□□□□□ -2.01
HMGB1P25-201ENST00000468402 RTTNQ86VV8 2226 aa2.46□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF407Q9C0G0 2248 aa2.46□□□□□ -2.01
HMGB1P25-201ENST00000468402 FREM2Q5SZK8 3169 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 NCOR1O75376 2440 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 URB1O60287 2271 aaKnown RBP2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 IGHV7-4-1A0A0J9YVY3 117 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 TMEM72A0PK05 275 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 RIIAD1A6NNX1 92 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 F8W036 122 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 TRAPPC2LH3BP13 241 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 PANO1I0J062 215 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 SOCS1O15524 211 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 RBFOX2O43251 390 aaKnown RBP eCLIP2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 OR2J2O76002 312 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 IGLV2-8P01709 118 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 CCL4P13236 92 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 PPP1CCP36873 323 aaKnown RBP2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 DEFA1P59665 94 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 ATP5G2Q06055 141 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 GTF3C1Q12789 2109 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 RNASE13Q5GAN3 156 aaKnown RBP2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 HES3Q5TGS1 186 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 LYRM7Q5U5X0 104 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 GLT8D1Q68CQ7 371 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 ZFAND6Q6FIF0 208 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 NTM-AS1Q6ZSK4 140 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 TCF24Q7RTU0 167 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 FAM19A3Q7Z5A8 133 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 ZIC4Q8N9L1 334 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 ST6GALNAC3Q8NDV1 305 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 OR10G2Q8NGC3 310 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 OR8J3Q8NGG0 315 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 OR8B12Q8NGG6 310 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 OR2T4Q8NH00 348 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 GPR119Q8TDV5 335 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 RMI2Q96E14 147 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 GPR82Q96P67 336 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 SEC22CQ9BRL7 303 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 ZNF649Q9BS31 505 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 OR8D2Q9GZM6 311 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 MED28Q9H204 178 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 CXorf21Q9HAI6 301 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 GPR84Q9NQS5 396 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 PRR34Q9NV39 138 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 TVP23BQ9NYZ1 205 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 AK3Q9UIJ7 227 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 JPT1Q9UK76 154 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 LAMTOR2Q9Y2Q5 125 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 KLF13Q9Y2Y9 288 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 A0A0C4DFX4 3053 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 SVILO95425 2214 aa2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 NCOA6Q14686 2063 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P25-201ENST00000468402 MED12LQ86YW9 2145 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 HEATR1Q9H583 2144 aaKnown RBP2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 CELSR3Q9NYQ7 3312 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 TRAV27A0A087WT01 109 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 IGHV1-45A0A0A0MS14 117 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 TMED7-TICAM2A0A0A6YYA0 188 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 IGHV3-72A0A0B4J1Y9 119 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 CXorf51AA0A1B0GTR3 108 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 A0A1B0GVG6 124 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 TMEM189A5PLL7 270 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 INMT-MINDY4F8WBC2 141 aa2.45□□□□□ -2.02
HMGB1P25-201ENST00000468402 J3QRK9 145 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms