RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 MGST2Q99735 147 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 ZFAND3Q9H8U3 227 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 WFDC1Q9HC57 220 aa7.78□□□□□ -1.16
UPF2-204ENST00000460569 A0A0D9SG52 128 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 A8MWP6 167 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 LGALS9O00182 355 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 ZNF207O43670 478 aaKnown RBP7.77□□□□□ -1.17
UPF2-204ENST00000460569 MPDU1O75352 247 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 IL4P05112 153 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 LINC00869P0C866 280 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 GATA2P23769 480 aaPredicted RBP7.77□□□□□ -1.17
UPF2-204ENST00000460569 SELENOTP62341 195 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 ZNF266Q14584 549 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 OPCMLQ14982 345 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 OR9G4Q8NGQ1 327 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 SCGB1C1Q8TD33 95 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 RNF125Q96EQ8 232 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 GINS3Q9BRX5 216 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 PBDC1Q9BVG4 233 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 GGTLC1Q9BX51 225 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 NPCDR1Q9BY65 106 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 WDR61Q9GZS3 305 aaKnown RBP7.77□□□□□ -1.17
UPF2-204ENST00000460569 ARL6Q9H0F7 186 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 PEMTQ9UBM1 199 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 UFC1Q9Y3C8 167 aa7.77□□□□□ -1.17
UPF2-204ENST00000460569 BORCS7-ASMTA0A0B4J1R7 106 aa7.76□□□□□ -1.17
UPF2-204ENST00000460569 KANTRA0A1W2PQU2 76 aa7.76□□□□□ -1.17
UPF2-204ENST00000460569 TAAR5O14804 337 aa7.76□□□□□ -1.17
UPF2-204ENST00000460569 TM4SF20Q53R12 229 aa7.76□□□□□ -1.17
UPF2-204ENST00000460569 MIC13Q5XKP0 118 aa7.76□□□□□ -1.17
UPF2-204ENST00000460569 RPL7L1Q6DKI1 246 aaKnown RBP7.76□□□□□ -1.17
UPF2-204ENST00000460569 TMEM182Q6ZP80 229 aaPredicted RBP7.76□□□□□ -1.17
UPF2-204ENST00000460569 ZNF709Q8N972 641 aa7.76□□□□□ -1.17
UPF2-204ENST00000460569 HSD17B11Q8NBQ5 300 aa7.76□□□□□ -1.17
UPF2-204ENST00000460569 ARPC5LQ9BPX5 153 aa7.76□□□□□ -1.17
UPF2-204ENST00000460569 RSG1Q9BU20 258 aa7.76□□□□□ -1.17
UPF2-204ENST00000460569 ELOVL1Q9BW60 279 aa7.76□□□□□ -1.17
UPF2-204ENST00000460569 PARD6GQ9BYG4 376 aaPredicted RBP7.76□□□□□ -1.17
UPF2-204ENST00000460569 DAZ1Q9NQZ3 744 aaKnown RBP7.76□□□□□ -1.17
UPF2-204ENST00000460569 KCNIP2Q9NS61 270 aa7.76□□□□□ -1.17
UPF2-204ENST00000460569 DOK5Q9P104 306 aa7.76□□□□□ -1.17
UPF2-204ENST00000460569 SLC45A2Q9UMX9 530 aa7.76□□□□□ -1.17
UPF2-204ENST00000460569 PXMP4Q9Y6I8 212 aa7.76□□□□□ -1.17
UPF2-204ENST00000460569 WI2-2373I1.2A0A1W2PRP0 233 aa7.75□□□□□ -1.17
UPF2-204ENST00000460569 TMEM213A2RRL7 107 aa7.75□□□□□ -1.17
UPF2-204ENST00000460569 C2orf70A6NJV1 201 aa7.75□□□□□ -1.17
UPF2-204ENST00000460569 SEC14L6B5MCN3 397 aa7.75□□□□□ -1.17
UPF2-204ENST00000460569 C17orf112F2Z3M2 114 aa7.75□□□□□ -1.17
UPF2-204ENST00000460569 BCL2L11O43521 198 aa7.75□□□□□ -1.17
UPF2-204ENST00000460569 SAP30O75446 220 aa7.75□□□□□ -1.17
UPF2-204ENST00000460569 CFDP00746 253 aaPredicted RBP7.75□□□□□ -1.17
UPF2-204ENST00000460569 EDN2P20800 178 aa7.75□□□□□ -1.17
UPF2-204ENST00000460569 NKX2-5P52952 324 aaPredicted RBP7.75□□□□□ -1.17
UPF2-204ENST00000460569 ELLP55199 621 aaPredicted RBP7.75□□□□□ -1.17
UPF2-204ENST00000460569 USF2Q15853 346 aaPredicted RBP7.75□□□□□ -1.17
UPF2-204ENST00000460569 LGALSLQ3ZCW2 172 aaPredicted RBP7.75□□□□□ -1.17
UPF2-204ENST00000460569 TMUB2Q71RG4 321 aa7.75□□□□□ -1.17
UPF2-204ENST00000460569 STPG3Q8N7X2 389 aa7.75□□□□□ -1.17
UPF2-204ENST00000460569 OR1B1Q8NGR6 318 aa7.75□□□□□ -1.17
UPF2-204ENST00000460569 METTL26Q96S19 204 aa7.75□□□□□ -1.17
UPF2-204ENST00000460569 VWFP04275 2813 aa7.74□□□□□ -1.17
UPF2-204ENST00000460569 IGHV3-49A0A0A0MS15 119 aa7.74□□□□□ -1.17
UPF2-204ENST00000460569 BOLA2-SMG1P6H3BVE0 249 aa7.74□□□□□ -1.17
UPF2-204ENST00000460569 K7EMT4 169 aa7.74□□□□□ -1.17
UPF2-204ENST00000460569 JTBO76095 146 aa7.74□□□□□ -1.17
UPF2-204ENST00000460569 HNRNPCP07910 306 aaKnown RBP eCLIP7.74□□□□□ -1.17
UPF2-204ENST00000460569 ORM2P19652 201 aa7.74□□□□□ -1.17
UPF2-204ENST00000460569 RPL29P47914 159 aaKnown RBP7.74□□□□□ -1.17
UPF2-204ENST00000460569 B2MP61769 119 aa7.74□□□□□ -1.17
UPF2-204ENST00000460569 PRR31Q5SQ13 230 aa7.74□□□□□ -1.17
UPF2-204ENST00000460569 C9orf62Q8N4C0 152 aa7.74□□□□□ -1.17
UPF2-204ENST00000460569 DYNLRB2Q8TF09 96 aa7.74□□□□□ -1.17
UPF2-204ENST00000460569 PPP1R14BQ96C90 147 aa7.74□□□□□ -1.17
UPF2-204ENST00000460569 NARS2Q96I59 477 aaKnown RBP7.74□□□□□ -1.17
UPF2-204ENST00000460569 ZNF471Q9BX82 626 aaPredicted RBP7.74□□□□□ -1.17
UPF2-204ENST00000460569 CYTL1Q9NRR1 136 aa7.74□□□□□ -1.17
UPF2-204ENST00000460569 SLC39A9Q9NUM3 307 aa7.74□□□□□ -1.17
UPF2-204ENST00000460569 RABAC1Q9UI14 185 aa7.74□□□□□ -1.17
UPF2-204ENST00000460569 IGHV3OR16-13A0A075B7E8 117 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 IGHV3-74A0A0B4J1X5 117 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 IGHV7-4-1A0A0J9YVY3 117 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 COX7A2P2O60397 106 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 HYPMO75409 117 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 CSN3P07498 182 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 OR5G3P0C626 314 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 FOLR2P14207 255 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 CBLN1P23435 193 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 NPPCP23582 126 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 ATP6V0CP27449 155 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 PRR20EP86478 221 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 PRR20CP86479 221 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 PRR20DP86480 221 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 PRR20BP86481 221 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 PRR20AP86496 221 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 FFAR4Q5NUL3 377 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 C9orf66Q5T8R8 295 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 PXDC1Q5TGL8 231 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 Q6ZRG5 221 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 WFDC9Q8NEX5 89 aa7.73□□□□□ -1.17
UPF2-204ENST00000460569 MARC2Q969Z3 335 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms