RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 IGLV2-11P01706 119 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 FABP3P05413 133 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 GIG44P09565 113 aaPredicted RBP3.3□□□□□ -1.88
SDCBP-205ENST00000447267 UCHL1P09936 223 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 CD37P11049 281 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 AREGP15514 252 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 S100GP29377 79 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 TGFBR1P36897 503 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 GLP1RP43220 463 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 MFAP4P55083 255 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 NDUFA6P56556 154 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 TAS2R41P59536 307 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 TMEM267Q0VDI3 215 aaPredicted RBP3.3□□□□□ -1.88
SDCBP-205ENST00000447267 CRMP1Q14194 572 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 ZNF79Q15937 498 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 TMEM244Q5VVB8 128 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 ALKAL2Q6UX46 152 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 TMPRSS11AQ6ZMR5 421 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 TMEM179BQ7Z7N9 219 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 LRRTM1Q86UE6 522 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 CMTM1Q8IZ96 169 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 H1FOOQ8IZA3 346 aaPredicted RBP3.3□□□□□ -1.88
SDCBP-205ENST00000447267 TEX45Q8NA69 505 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 OR2AK2Q8NG84 335 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 OR51S1Q8NGJ8 323 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 OR1L1Q8NH94 360 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 RFESDQ8TAC1 157 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 APH1BQ8WW43 257 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 ZNRF4Q8WWF5 429 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 CENPNQ96H22 339 aaPredicted RBP3.3□□□□□ -1.88
SDCBP-205ENST00000447267 CLCC1Q96S66 551 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 S100A13Q99584 98 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 SULT4A1Q9BR01 284 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 ACTR3CQ9C0K3 210 aaPredicted RBP3.3□□□□□ -1.88
SDCBP-205ENST00000447267 LINC00574Q9H8X3 128 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 REEP1Q9H902 201 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 DNAJC27Q9NZQ0 273 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 SS18L2Q9UHA2 77 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 ST3GAL6Q9Y274 331 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 IER3IP1Q9Y5U9 82 aa3.3□□□□□ -1.88
SDCBP-205ENST00000447267 TRAV30A0A087WSZ9 112 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 ANKRD20A5PA0PJZ0 165 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 TMEM213A2RRL7 107 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 TVP23AA6NH52 213 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 PPP5D1E7EU14 171 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 NBR2O15453 112 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 MAGEB4O15481 346 aaPredicted RBP3.29□□□□□ -1.88
SDCBP-205ENST00000447267 SC5DO75845 299 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 NDUFA3O95167 84 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 HLA-DQB1P01920 261 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 SULT1A3P0DMM9 295 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 SULT1A4P0DMN0 295 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 AKR1C4P17516 323 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 CXCL2P19875 107 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 HTR2CP28335 458 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 SSTR5P35346 364 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 RPL29P47914 159 aaKnown RBP3.29□□□□□ -1.88
SDCBP-205ENST00000447267 HCCSP53701 268 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 GRB2P62993 217 aaKnown RBP3.29□□□□□ -1.88
SDCBP-205ENST00000447267 EIF5AP63241 154 aaKnown RBP3.29□□□□□ -1.88
SDCBP-205ENST00000447267 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 OR4A47Q6IF82 309 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 PRR27Q6MZM9 219 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 FAHD1Q6P587 224 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 Q6ZRU5 148 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 Q6ZSA8 131 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 MOB3CQ70IA8 216 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 AQP12AQ8IXF9 295 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 RNASEH2CQ8TDP1 164 aaKnown RBP3.29□□□□□ -1.88
SDCBP-205ENST00000447267 FCGR1BQ92637 280 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 NMNAT3Q96T66 252 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 SEC11CQ9BY50 192 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 POLR2J2Q9GZM3 115 aaKnown RBP3.29□□□□□ -1.88
SDCBP-205ENST00000447267 C20orf27Q9GZN8 174 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 POLR2J3Q9H1A7 115 aaKnown RBP3.29□□□□□ -1.88
SDCBP-205ENST00000447267 GPN1Q9HCN4 374 aaPredicted RBP3.29□□□□□ -1.88
SDCBP-205ENST00000447267 CALYQ9NYX4 217 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 IDI2-AS1Q9NZ38 188 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 FLVCR2Q9UPI3 526 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 RFNGQ9Y644 331 aa3.29□□□□□ -1.88
SDCBP-205ENST00000447267 DHRS12A0PJE2 317 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 C15orf61A6NNL5 157 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 E5RGE8 158 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 G3V3Q6 166 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 H3BUA1 57 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 CORTO00230 105 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 LYRM1O43325 122 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 BUB3O43684 328 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 OR7C2O60412 319 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 ENTPD6O75354 484 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 GCGP01275 180 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 OR5AC1P0C628 307 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 UBBP0CG47 229 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 PET100P0DJ07 73 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 OR13C7P0DN81 318 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 GZMBP10144 247 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 ZBTB25P24278 435 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 GADD45AP24522 165 aa3.28□□□□□ -1.88
SDCBP-205ENST00000447267 HTR1FP30939 366 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms