RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ANKHD1Q8IWZ3 2542 aaKnown RBP14.82□□□□□ -0.04
CLK1-205ENST00000434813 COL6A6A6NMZ7 2263 aa14.82□□□□□ -0.04
CLK1-205ENST00000434813 AMY1AP04745 511 aa14.82□□□□□ -0.04
CLK1-205ENST00000434813 PAFAH1B2P68402 229 aa14.82□□□□□ -0.04
CLK1-205ENST00000434813 TMEM183BQ1AE95 376 aa14.82□□□□□ -0.04
CLK1-205ENST00000434813 BAGE2Q86Y30 109 aa14.82□□□□□ -0.04
CLK1-205ENST00000434813 SRSF8Q9BRL6 282 aaKnown RBP14.82□□□□□ -0.04
CLK1-205ENST00000434813 SERTAD4Q9NUC0 356 aa14.82□□□□□ -0.04
CLK1-205ENST00000434813 NAT8BQ9UHF3 227 aa14.82□□□□□ -0.04
CLK1-205ENST00000434813 SERF1AO75920 110 aa14.81□□□□□ -0.04
CLK1-205ENST00000434813 GP9P14770 177 aa14.81□□□□□ -0.04
CLK1-205ENST00000434813 RANP62826 216 aaKnown RBP14.81□□□□□ -0.04
CLK1-205ENST00000434813 MBD6Q96DN6 1003 aa14.81□□□□□ -0.04
CLK1-205ENST00000434813 MS4A10Q96PG2 267 aa14.81□□□□□ -0.04
CLK1-205ENST00000434813 RAB1BQ9H0U4 201 aa14.81□□□□□ -0.04
CLK1-205ENST00000434813 IZUMO1RA6ND01 250 aa14.8□□□□□ -0.04
CLK1-205ENST00000434813 TPPP2P59282 170 aa14.8□□□□□ -0.04
CLK1-205ENST00000434813 TPTE2P1Q5T6R2 138 aa14.8□□□□□ -0.04
CLK1-205ENST00000434813 SMIM12Q96EX1 92 aa14.8□□□□□ -0.04
CLK1-205ENST00000434813 EPDR1Q9UM22 224 aa14.8□□□□□ -0.04
CLK1-205ENST00000434813 ZFYVE26Q68DK2 2539 aa14.8□□□□□ -0.04
CLK1-205ENST00000434813 IGSF10Q6WRI0 2623 aa14.8□□□□□ -0.04
CLK1-205ENST00000434813 KMT2BQ9UMN6 2715 aaPredicted RBP14.8□□□□□ -0.04
CLK1-205ENST00000434813 IGHV3-21A0A0B4J1V1 117 aa14.8□□□□□ -0.04
CLK1-205ENST00000434813 TRAV34A0A0B4J273 112 aa14.8□□□□□ -0.04
CLK1-205ENST00000434813 A8MWP6 167 aa14.8□□□□□ -0.04
CLK1-205ENST00000434813 SPINK4O60575 86 aa14.8□□□□□ -0.04
CLK1-205ENST00000434813 HLA-DQA1P01909 254 aa14.8□□□□□ -0.04
CLK1-205ENST00000434813 GNG5P63218 68 aa14.8□□□□□ -0.04
CLK1-205ENST00000434813 C7orf69Q9H7B7 122 aa14.8□□□□□ -0.04
CLK1-205ENST00000434813 IGLC1P0CG04 106 aa14.79□□□□□ -0.04
CLK1-205ENST00000434813 SLC35B1P78383 322 aa14.79□□□□□ -0.04
CLK1-205ENST00000434813 LDLRAD2Q5SZI1 272 aa14.79□□□□□ -0.04
CLK1-205ENST00000434813 BAGE3Q86Y29 109 aa14.79□□□□□ -0.04
CLK1-205ENST00000434813 OR11H6Q8NGC7 330 aa14.79□□□□□ -0.04
CLK1-205ENST00000434813 KLF12Q9Y4X4 402 aa14.79□□□□□ -0.04
CLK1-205ENST00000434813 I3L2K1 104 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 TIMM23O14925 209 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 SLC25A5P05141 298 aaKnown RBP14.78□□□□□ -0.04
CLK1-205ENST00000434813 NBEAP1P0C6P0 100 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 UBE2G1P62253 170 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 PLGLAQ15195 96 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 BLNKQ8WV28 456 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 TIMD4Q96H15 378 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 CBLN4Q9NTU7 201 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 CA1P00915 261 aaPredicted RBP14.78□□□□□ -0.04
CLK1-205ENST00000434813 HTR1DP28221 377 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 OR10J3Q5JRS4 329 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 MRPL54Q6P161 138 aaKnown RBP14.78□□□□□ -0.04
CLK1-205ENST00000434813 RASL11AQ6T310 242 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 C5orf17Q8NAS9 161 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 WIPF2Q8TF74 440 aaPredicted RBP14.78□□□□□ -0.04
CLK1-205ENST00000434813 FAM168AQ92567 244 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 GRAMD2BQ96HH9 432 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 CHRDL1Q9BU40 450 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 NAGKQ9UJ70 344 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 HIGD1AQ9Y241 93 aa14.78□□□□□ -0.04
CLK1-205ENST00000434813 LY6HO94772 140 aa14.77□□□□□ -0.04
CLK1-205ENST00000434813 SCGB1D1O95968 90 aa14.77□□□□□ -0.04
CLK1-205ENST00000434813 C11orf71Q6IPW1 123 aa14.77□□□□□ -0.04
CLK1-205ENST00000434813 NUDT10Q8NFP7 164 aa14.77□□□□□ -0.04
CLK1-205ENST00000434813 NUDT11Q96G61 164 aa14.77□□□□□ -0.04
CLK1-205ENST00000434813 ATG101Q9BSB4 218 aa14.77□□□□□ -0.04
CLK1-205ENST00000434813 GNB4Q9HAV0 340 aa14.77□□□□□ -0.04
CLK1-205ENST00000434813 PGPA6NDG6 321 aa14.76□□□□□ -0.05
CLK1-205ENST00000434813 F2Z2F3 143 aa14.76□□□□□ -0.05
CLK1-205ENST00000434813 SNRPCP09234 159 aaKnown RBP14.76□□□□□ -0.05
CLK1-205ENST00000434813 MMDQ15546 238 aa14.76□□□□□ -0.05
CLK1-205ENST00000434813 Q6ZWC4 215 aa14.76□□□□□ -0.05
CLK1-205ENST00000434813 CFHR4Q92496 578 aa14.76□□□□□ -0.05
CLK1-205ENST00000434813 SSBP3Q9BWW4 388 aaPredicted RBP14.76□□□□□ -0.05
CLK1-205ENST00000434813 GSX1Q9H4S2 264 aaPredicted RBP14.76□□□□□ -0.05
CLK1-205ENST00000434813 DPM3Q9P2X0 92 aa14.76□□□□□ -0.05
CLK1-205ENST00000434813 M0R1W7 72 aa14.76□□□□□ -0.05
CLK1-205ENST00000434813 BMPR1BO00238 502 aa14.76□□□□□ -0.05
CLK1-205ENST00000434813 HIST1H1EP10412 219 aaKnown RBP14.76□□□□□ -0.05
CLK1-205ENST00000434813 PSG1P11464 419 aa14.76□□□□□ -0.05
CLK1-205ENST00000434813 GNLYP22749 145 aa14.76□□□□□ -0.05
CLK1-205ENST00000434813 UQCRFS1P47985 274 aa14.76□□□□□ -0.05
CLK1-205ENST00000434813 USF2Q15853 346 aaPredicted RBP14.76□□□□□ -0.05
CLK1-205ENST00000434813 WNT10AQ9GZT5 417 aa14.76□□□□□ -0.05
CLK1-205ENST00000434813 ODF3BA8MYP8 253 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 NBR2O15453 112 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 CEACAM3P40198 252 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 LHFPL4Q7Z7J7 247 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 NEU4Q8WWR8 484 aaPredicted RBP14.75□□□□□ -0.05
CLK1-205ENST00000434813 GPR82Q96P67 336 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 NDUFAF3Q9BU61 184 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 TMEM14CQ9P0S9 112 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 POLR3KQ9Y2Y1 108 aaPredicted RBP14.75□□□□□ -0.05
CLK1-205ENST00000434813 NDUFA3O95167 84 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 LYZP61626 148 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 ARF6P62330 175 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 LEMD1Q68G75 181 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 FMC1Q96HJ9 113 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 RASL11BQ9BPW5 248 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 MLST8Q9BVC4 326 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 Q9H3A6 140 aa14.75□□□□□ -0.05
CLK1-205ENST00000434813 ZNF331Q9NQX6 463 aaPredicted RBP14.75□□□□□ -0.05
CLK1-205ENST00000434813 CNIH1O95406 144 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms