RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 NXPH3O95157 252 aa12.97□□□□□ -0.33
UPK3BP1-201ENST00000428678 PSG1P11464 419 aa12.97□□□□□ -0.33
UPK3BP1-201ENST00000428678 ID1P41134 155 aa12.97□□□□□ -0.33
UPK3BP1-201ENST00000428678 TNP2Q05952 138 aa12.97□□□□□ -0.33
UPK3BP1-201ENST00000428678 OXA1LQ15070 435 aa12.97□□□□□ -0.33
UPK3BP1-201ENST00000428678 MAPKAPK5-AS1Q8N8E1 139 aa12.97□□□□□ -0.33
UPK3BP1-201ENST00000428678 COQ8AQ8NI60 647 aa12.97□□□□□ -0.33
UPK3BP1-201ENST00000428678 YIPF6Q96EC8 236 aa12.97□□□□□ -0.33
UPK3BP1-201ENST00000428678 PBDC1Q9BVG4 233 aa12.97□□□□□ -0.33
UPK3BP1-201ENST00000428678 WDR12Q9GZL7 423 aaKnown RBP12.97□□□□□ -0.33
UPK3BP1-201ENST00000428678 CACNG5Q9UF02 275 aa12.97□□□□□ -0.33
UPK3BP1-201ENST00000428678 LRP1BQ9NZR2 4599 aa12.97□□□□□ -0.33
UPK3BP1-201ENST00000428678 B3GALNT1O75752 331 aa12.96□□□□□ -0.33
UPK3BP1-201ENST00000428678 CDK2AP2O75956 126 aa12.96□□□□□ -0.33
UPK3BP1-201ENST00000428678 NUP62P37198 522 aaPredicted RBP12.96□□□□□ -0.33
UPK3BP1-201ENST00000428678 DAD1P61803 113 aa12.96□□□□□ -0.33
UPK3BP1-201ENST00000428678 SCGB2B2Q4G0G5 96 aa12.96□□□□□ -0.33
UPK3BP1-201ENST00000428678 TMEM170AQ8WVE7 144 aa12.96□□□□□ -0.33
UPK3BP1-201ENST00000428678 RNF125Q96EQ8 232 aa12.96□□□□□ -0.33
UPK3BP1-201ENST00000428678 ATG101Q9BSB4 218 aa12.96□□□□□ -0.33
UPK3BP1-201ENST00000428678 TMEM222Q9H0R3 208 aa12.96□□□□□ -0.33
UPK3BP1-201ENST00000428678 PFDN2Q9UHV9 154 aa12.96□□□□□ -0.33
UPK3BP1-201ENST00000428678 ATP6V1G2O95670 118 aa12.95□□□□□ -0.34
UPK3BP1-201ENST00000428678 CDS2O95674 445 aa12.95□□□□□ -0.34
UPK3BP1-201ENST00000428678 OR5AC1P0C628 307 aa12.95□□□□□ -0.34
UPK3BP1-201ENST00000428678 TBPP20226 339 aa12.95□□□□□ -0.34
UPK3BP1-201ENST00000428678 PSMB3P49720 205 aa12.95□□□□□ -0.34
UPK3BP1-201ENST00000428678 RORCP51449 518 aa12.95□□□□□ -0.34
UPK3BP1-201ENST00000428678 PSG9Q00887 426 aa12.95□□□□□ -0.34
UPK3BP1-201ENST00000428678 RRN3P1Q2M238 152 aa12.95□□□□□ -0.34
UPK3BP1-201ENST00000428678 OR4D10Q8NGI6 311 aa12.95□□□□□ -0.34
UPK3BP1-201ENST00000428678 OR52I2Q8NH67 350 aa12.95□□□□□ -0.34
UPK3BP1-201ENST00000428678 TERB2Q8NHR7 220 aa12.95□□□□□ -0.34
UPK3BP1-201ENST00000428678 LHFPL5Q8TAF8 219 aa12.95□□□□□ -0.34
UPK3BP1-201ENST00000428678 MARCH1Q8TCQ1 289 aa12.95□□□□□ -0.34
UPK3BP1-201ENST00000428678 CLUHP3Q96NS8 147 aa12.95□□□□□ -0.34
UPK3BP1-201ENST00000428678 FAM25AB3EWG3 89 aa12.94□□□□□ -0.34
UPK3BP1-201ENST00000428678 FAM25CB3EWG5 89 aa12.94□□□□□ -0.34
UPK3BP1-201ENST00000428678 FAM25GB3EWG6 89 aa12.94□□□□□ -0.34
UPK3BP1-201ENST00000428678 FAM3BP58499 235 aaPredicted RBP12.94□□□□□ -0.34
UPK3BP1-201ENST00000428678 ZNF79Q15937 498 aa12.94□□□□□ -0.34
UPK3BP1-201ENST00000428678 EBLN2Q6P2I7 272 aa12.94□□□□□ -0.34
UPK3BP1-201ENST00000428678 GSG1LQ6UXU4 331 aa12.94□□□□□ -0.34
UPK3BP1-201ENST00000428678 NOXA1Q86UR1 476 aa12.94□□□□□ -0.34
UPK3BP1-201ENST00000428678 C1orf158Q8N1D5 194 aa12.94□□□□□ -0.34
UPK3BP1-201ENST00000428678 C15orf53Q8NAA6 179 aa12.94□□□□□ -0.34
UPK3BP1-201ENST00000428678 RBPMSQ93062 196 aaKnown RBP12.94□□□□□ -0.34
UPK3BP1-201ENST00000428678 GPR146Q96CH1 333 aa12.94□□□□□ -0.34
UPK3BP1-201ENST00000428678 TEX13DA0A0J9YY54 714 aaPredicted RBP12.93□□□□□ -0.34
UPK3BP1-201ENST00000428678 F6UB75 175 aa12.93□□□□□ -0.34
UPK3BP1-201ENST00000428678 TNFAIP8O95379 198 aa12.93□□□□□ -0.34
UPK3BP1-201ENST00000428678 MEF2DQ14814 521 aa12.93□□□□□ -0.34
UPK3BP1-201ENST00000428678 FAM78BQ5VT40 261 aa12.93□□□□□ -0.34
UPK3BP1-201ENST00000428678 SPATA31B1PQ5VZV4 182 aa12.93□□□□□ -0.34
UPK3BP1-201ENST00000428678 OR8G2PQ6IF36 304 aa12.93□□□□□ -0.34
UPK3BP1-201ENST00000428678 SELENOHQ8IZQ5 122 aaKnown RBP12.93□□□□□ -0.34
UPK3BP1-201ENST00000428678 GLYATL2Q8WU03 294 aa12.93□□□□□ -0.34
UPK3BP1-201ENST00000428678 MAGT1Q9H0U3 335 aa12.93□□□□□ -0.34
UPK3BP1-201ENST00000428678 NCS1P62166 190 aa12.92□□□□□ -0.34
UPK3BP1-201ENST00000428678 NMSQ5H8A3 153 aa12.92□□□□□ -0.34
UPK3BP1-201ENST00000428678 TMEM268Q5VZI3 342 aa12.92□□□□□ -0.34
UPK3BP1-201ENST00000428678 ABHD1Q96SE0 405 aa12.92□□□□□ -0.34
UPK3BP1-201ENST00000428678 TMEM208Q9BTX3 173 aa12.92□□□□□ -0.34
UPK3BP1-201ENST00000428678 VCX3AQ9NNX9 186 aa12.92□□□□□ -0.34
UPK3BP1-201ENST00000428678 MTFP1Q9UDX5 166 aa12.92□□□□□ -0.34
UPK3BP1-201ENST00000428678 C14orf166Q9Y224 244 aaKnown RBP12.92□□□□□ -0.34
UPK3BP1-201ENST00000428678 NBDYA0A0U1RRE5 68 aa12.91□□□□□ -0.34
UPK3BP1-201ENST00000428678 ZFP92A6NM28 416 aa12.91□□□□□ -0.34
UPK3BP1-201ENST00000428678 SOCS3O14543 225 aa12.91□□□□□ -0.34
UPK3BP1-201ENST00000428678 RAB3DO95716 219 aa12.91□□□□□ -0.34
UPK3BP1-201ENST00000428678 LYZP61626 148 aa12.91□□□□□ -0.34
UPK3BP1-201ENST00000428678 SUPT4H1P63272 117 aaKnown RBP12.91□□□□□ -0.34
UPK3BP1-201ENST00000428678 KLF9Q13886 244 aaPredicted RBP12.91□□□□□ -0.34
UPK3BP1-201ENST00000428678 C6orf223Q8N319 242 aa12.91□□□□□ -0.34
UPK3BP1-201ENST00000428678 PPP1R14BQ96C90 147 aa12.91□□□□□ -0.34
UPK3BP1-201ENST00000428678 NAA60Q9H7X0 242 aa12.91□□□□□ -0.34
UPK3BP1-201ENST00000428678 A0A0J9YX75 114 aa12.9□□□□□ -0.34
UPK3BP1-201ENST00000428678 ISLRO14498 428 aa12.9□□□□□ -0.34
UPK3BP1-201ENST00000428678 PAX9P55771 341 aa12.9□□□□□ -0.34
UPK3BP1-201ENST00000428678 VBP1P61758 197 aa12.9□□□□□ -0.34
UPK3BP1-201ENST00000428678 C1orf194Q5T5A4 169 aa12.9□□□□□ -0.34
UPK3BP1-201ENST00000428678 TMEM229BQ8NBD8 167 aa12.9□□□□□ -0.34
UPK3BP1-201ENST00000428678 APOBP04114 4563 aaKnown RBP12.89□□□□□ -0.35
UPK3BP1-201ENST00000428678 SULT1A3P0DMM9 295 aa12.89□□□□□ -0.35
UPK3BP1-201ENST00000428678 SULT1A4P0DMN0 295 aa12.89□□□□□ -0.35
UPK3BP1-201ENST00000428678 TAS2R19P59542 299 aa12.89□□□□□ -0.35
UPK3BP1-201ENST00000428678 ZNF90Q03938 601 aa12.89□□□□□ -0.35
UPK3BP1-201ENST00000428678 STEAP1BQ6NZ63 245 aa12.89□□□□□ -0.35
UPK3BP1-201ENST00000428678 MZT2AQ6P582 158 aa12.89□□□□□ -0.35
UPK3BP1-201ENST00000428678 OR8I2Q8N0Y5 310 aa12.89□□□□□ -0.35
UPK3BP1-201ENST00000428678 RTBDNQ9BSG5 229 aaPredicted RBP12.89□□□□□ -0.35
UPK3BP1-201ENST00000428678 RPRMQ9NS64 109 aa12.89□□□□□ -0.35
UPK3BP1-201ENST00000428678 EXTL2Q9UBQ6 330 aa12.89□□□□□ -0.35
UPK3BP1-201ENST00000428678 NUDT3O95989 172 aa12.88□□□□□ -0.35
UPK3BP1-201ENST00000428678 ALDH3B2P48448 385 aa12.88□□□□□ -0.35
UPK3BP1-201ENST00000428678 GPR107Q5VW38 600 aa12.88□□□□□ -0.35
UPK3BP1-201ENST00000428678 FAAP20Q6NZ36 180 aa12.88□□□□□ -0.35
UPK3BP1-201ENST00000428678 LGI3Q8N145 548 aa12.88□□□□□ -0.35
UPK3BP1-201ENST00000428678 ZNRF2Q8NHG8 242 aa12.88□□□□□ -0.35
UPK3BP1-201ENST00000428678 SLC35E1Q96K37 410 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms