RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 IGHV3-35A0A0C4DH35 117 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 MCRIP2Q9BUT9 160 aaKnown RBP11.47□□□□□ -0.57
SMC5-201ENST00000361138 IGHV2-26A0A0B4J1V2 119 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 SH2D7A6NKC9 451 aaPredicted RBP11.47□□□□□ -0.57
SMC5-201ENST00000361138 MLNRO43193 412 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 SCGB1A1P11684 91 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 CCL3L1P16619 93 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 TMEM190Q8WZ59 177 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 CYSLTR1Q9Y271 337 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 RPL15P61313 204 aaKnown RBP11.47□□□□□ -0.57
SMC5-201ENST00000361138 FAM74A4Q5TZK3 123 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 ZNF114Q8NC26 417 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 RNF125Q96EQ8 232 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 GFRA4Q9GZZ7 299 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 C21orf62Q9NYP8 219 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 METRNQ9UJH8 293 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 TMEM262E9PQX1 116 aa11.46□□□□□ -0.57
SMC5-201ENST00000361138 IGKV1-39P01597 117 aa11.46□□□□□ -0.57
SMC5-201ENST00000361138 IGKV1D-39P04432 117 aa11.46□□□□□ -0.57
SMC5-201ENST00000361138 ZNF138P52744 262 aa11.46□□□□□ -0.57
SMC5-201ENST00000361138 LINC01559Q495D7 138 aa11.46□□□□□ -0.57
SMC5-201ENST00000361138 FNDC1Q4ZHG4 1894 aaPredicted RBP11.46□□□□□ -0.57
SMC5-201ENST00000361138 SFTA2Q6UW10 78 aa11.46□□□□□ -0.57
SMC5-201ENST00000361138 FAM231BA6NCW3 169 aa11.46□□□□□ -0.57
SMC5-201ENST00000361138 MYOD1P15172 320 aa11.46□□□□□ -0.57
SMC5-201ENST00000361138 HAPLN4Q86UW8 402 aa11.46□□□□□ -0.57
SMC5-201ENST00000361138 UBTD1Q9HAC8 227 aa11.46□□□□□ -0.57
SMC5-201ENST00000361138 KNL1Q8NG31 2342 aa11.46□□□□□ -0.58
SMC5-201ENST00000361138 SMIM27A0A1W2PRY6 76 aa11.46□□□□□ -0.58
SMC5-201ENST00000361138 THSD7BQ9C0I4 1608 aa11.46□□□□□ -0.58
SMC5-201ENST00000361138 SCRT1Q9BWW7 348 aa11.45□□□□□ -0.58
SMC5-201ENST00000361138 PDLIM4P50479 330 aa11.45□□□□□ -0.58
SMC5-201ENST00000361138 SMAD7O15105 426 aaKnown RBP11.45□□□□□ -0.58
SMC5-201ENST00000361138 TOMM40O96008 361 aa11.45□□□□□ -0.58
SMC5-201ENST00000361138 STPG4Q8N801 248 aa11.45□□□□□ -0.58
SMC5-201ENST00000361138 ASCL2Q99929 193 aa11.45□□□□□ -0.58
SMC5-201ENST00000361138 FXYD7P58549 80 aa11.45□□□□□ -0.58
SMC5-201ENST00000361138 B3GALT5-AS1P59052 145 aa11.45□□□□□ -0.58
SMC5-201ENST00000361138 PAPPA-AS1Q5QFB9 102 aa11.45□□□□□ -0.58
SMC5-201ENST00000361138 H3BRM9 83 aa11.45□□□□□ -0.58
SMC5-201ENST00000361138 EXOC3-AS1Q8N2X6 119 aa11.45□□□□□ -0.58
SMC5-201ENST00000361138 ARPC1AQ92747 370 aa11.45□□□□□ -0.58
SMC5-201ENST00000361138 LOC105371242A0A075B767 164 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 IGHV1-18A0A0C4DH31 117 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 LYZL1Q6UWQ5 148 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 FAM159AQ6UWV7 190 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 URB1O60287 2271 aaKnown RBP11.44□□□□□ -0.58
SMC5-201ENST00000361138 COA6Q5JTJ3 125 aaKnown RBP11.44□□□□□ -0.58
SMC5-201ENST00000361138 C9orf106Q8NAJ2 232 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 VKORC1Q9BQB6 163 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 A8MWV9 139 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 ETV2O00321 342 aaPredicted RBP11.44□□□□□ -0.58
SMC5-201ENST00000361138 IGHV3OR16-13A0A075B7E8 117 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 IGHV3-74A0A0B4J1X5 117 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 ZNF815PA8K554 130 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 LAGE3Q14657 143 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 TRGV9Q99603 122 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 SPRR3Q9UBC9 169 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 F2Z2F3 143 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 LINC00479Q96M42 142 aa11.44□□□□□ -0.58
SMC5-201ENST00000361138 NCR2O95944 276 aa11.43□□□□□ -0.58
SMC5-201ENST00000361138 IGLL1P15814 213 aa11.43□□□□□ -0.58
SMC5-201ENST00000361138 ADAMTSL5Q6ZMM2 481 aa11.43□□□□□ -0.58
SMC5-201ENST00000361138 SLC25A39Q9BZJ4 359 aaPredicted RBP11.43□□□□□ -0.58
SMC5-201ENST00000361138 IGLV3-1P01715 115 aa11.43□□□□□ -0.58
SMC5-201ENST00000361138 PLXNB3Q9ULL4 1909 aa11.43□□□□□ -0.58
SMC5-201ENST00000361138 MPDZO75970 2070 aa11.43□□□□□ -0.58
SMC5-201ENST00000361138 TRAV8-4A0A0B4J246 113 aa11.43□□□□□ -0.58
SMC5-201ENST00000361138 C9orf118A6NHY6 69 aa11.43□□□□□ -0.58
SMC5-201ENST00000361138 IGHV4-39P01824 125 aa11.43□□□□□ -0.58
SMC5-201ENST00000361138 SLAQ13239 276 aa11.43□□□□□ -0.58
SMC5-201ENST00000361138 MBNL3Q9NUK0 354 aaKnown RBP11.43□□□□□ -0.58
SMC5-201ENST00000361138 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.43□□□□□ -0.58
SMC5-201ENST00000361138 KLRB1Q12918 225 aa11.43□□□□□ -0.58
SMC5-201ENST00000361138 ORMDL2Q53FV1 153 aa11.43□□□□□ -0.58
SMC5-201ENST00000361138 SRRM5B3KS81 715 aa11.42□□□□□ -0.58
SMC5-201ENST00000361138 IGKV3-15P01624 115 aa11.42□□□□□ -0.58
SMC5-201ENST00000361138 PRB4P10163 310 aaPredicted RBP11.42□□□□□ -0.58
SMC5-201ENST00000361138 C19orf54Q5BKX5 351 aa11.42□□□□□ -0.58
SMC5-201ENST00000361138 KLF17Q5JT82 389 aaPredicted RBP11.42□□□□□ -0.58
SMC5-201ENST00000361138 IFI27P40305 119 aaPredicted RBP11.42□□□□□ -0.58
SMC5-201ENST00000361138 PPP1R27Q86WC6 154 aa11.42□□□□□ -0.58
SMC5-201ENST00000361138 GEMIN7Q9H840 131 aaKnown RBP11.42□□□□□ -0.58
SMC5-201ENST00000361138 UNC13CQ8NB66 2214 aa11.42□□□□□ -0.58
SMC5-201ENST00000361138 IL18BPO95998 194 aa11.42□□□□□ -0.58
SMC5-201ENST00000361138 CDKN1BP46527 198 aa11.42□□□□□ -0.58
SMC5-201ENST00000361138 FAM71F2Q6NXP2 309 aa11.42□□□□□ -0.58
SMC5-201ENST00000361138 C10orf55Q5SWW7 151 aa11.42□□□□□ -0.58
SMC5-201ENST00000361138 ZFAND6Q6FIF0 208 aa11.42□□□□□ -0.58
SMC5-201ENST00000361138 FAM27E3Q08E93 113 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 FDCSPQ8NFU4 85 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 RCHY1Q96PM5 261 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 CHAC1Q9BUX1 264 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 COL4A6Q14031 1691 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 IGHV1-24A0A0C4DH33 117 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 PPIFP30405 207 aaKnown RBP11.41□□□□□ -0.58
SMC5-201ENST00000361138 KIR3DL3Q8N743 410 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 DPM3Q9P2X0 92 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 IGHV3-49A0A0A0MS15 119 aa11.41□□□□□ -0.58
SMC5-201ENST00000361138 UBE2L6O14933 153 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms