RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 RFNGQ9Y644 331 aa4.21□□□□□ -1.73
SKP1-202ENST00000353411 NRXN2Q9P2S2 1712 aa4.21□□□□□ -1.73
SKP1-202ENST00000353411 SMIM27A0A1W2PRY6 76 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 DLX6P56179 175 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 PCSK4Q6UW60 755 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 RASL10BQ96S79 203 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 SFTA2Q6UW10 78 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 WIPF2Q8TF74 440 aaPredicted RBP4.21□□□□□ -1.74
SKP1-202ENST00000353411 CXXC4Q9H2H0 198 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 SCRT2Q9NQ03 307 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 BDP1A6H8Y1 2624 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 CCL7P80098 99 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 TMEM170BQ5T4T1 132 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 LINC00305Q7Z4B0 112 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 PRR32B1ATL7 298 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 OR2H2O95918 312 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 MIR17HGQ75NE6 70 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 TM4SF19Q96DZ7 209 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 C1QTNF5Q9BXJ0 243 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 MMP17Q9ULZ9 603 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 LCTP09848 1927 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 C9JAW5 83 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 ATP5G1P05496 136 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 RPL11P62913 178 aaKnown RBP4.21□□□□□ -1.74
SKP1-202ENST00000353411 ATP5G2Q06055 141 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 MRPL23Q16540 153 aaKnown RBP4.21□□□□□ -1.74
SKP1-202ENST00000353411 GOLT1AQ6ZVE7 132 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 HAPLN4Q86UW8 402 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 VKORC1Q9BQB6 163 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 FABP5P3A8MUU1 101 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 C2CD4DB7Z1M9 353 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 DGAT2L7PQ6IED9 249 aa4.21□□□□□ -1.74
SKP1-202ENST00000353411 CENPVQ7Z7K6 275 aaPredicted RBP4.21□□□□□ -1.74
SKP1-202ENST00000353411 ACYP1P07311 99 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 MGPP08493 103 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 LGALS1P09382 135 aaKnown RBP4.2□□□□□ -1.74
SKP1-202ENST00000353411 FAM106CPP0CH98 169 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 RNPS1Q15287 305 aaKnown RBP4.2□□□□□ -1.74
SKP1-202ENST00000353411 FAM106AQ4KMX7 169 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 CNEP1R1Q8N9A8 125 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 DLL3Q9NYJ7 618 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 IGKV1-8A0A0C4DH67 115 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 GGTLC3B5MD39 225 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 CTSBP07858 339 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 VDAC2P45880 294 aaPredicted RBP4.2□□□□□ -1.74
SKP1-202ENST00000353411 EGR4Q05215 589 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 FOXI1Q12951 378 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 TEN1Q86WV5 123 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 ABHD12Q8N2K0 398 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 ZSWIM8A7E2V4 1837 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 PTH2Q96A98 100 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 YPEL4Q96NS1 127 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 hCG_38984A0A1B0GV85 526 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 CXCL13O43927 109 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 TMEM30BQ3MIR4 351 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 PPP1R32Q7Z5V6 425 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 GTSCR1Q86UQ5 136 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 V9GYV3 84 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 A0A1W2PPI3 338 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 CDX4O14627 284 aaPredicted RBP4.2□□□□□ -1.74
SKP1-202ENST00000353411 LYPD3O95274 346 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 PRDM14Q9GZV8 571 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 PRSS29PA6NIE9 313 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 H7C1H1 209 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 IGHG4P01861 327 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 INAFM2P0DMQ5 153 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 PTGDSP41222 190 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 RNF183Q96D59 192 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 LILRA5A6NI73 299 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 NDUFB8O95169 186 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 MAGEA5P43359 124 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 IL11RAQ14626 422 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 LAGE3Q14657 143 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 FAM53AQ6NSI3 398 aaPredicted RBP4.2□□□□□ -1.74
SKP1-202ENST00000353411 YRDCQ86U90 279 aaKnown RBP4.2□□□□□ -1.74
SKP1-202ENST00000353411 C11orf44Q8N8P7 122 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 OVOL2Q9BRP0 275 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 OTORQ9NRC9 128 aa4.2□□□□□ -1.74
SKP1-202ENST00000353411 LOC101059948A0A1B0GTJ6 334 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 PRR33A8MZF0 331 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 Q6ZS49 121 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 FAM231DQ6ZW35 169 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 ZIC4Q8N9L1 334 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 LIME1Q9H400 295 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 MUC6Q6W4X9 2439 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 IGHV3-20A0A0C4DH32 117 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 J3QW42 95 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 RCHY1Q96PM5 261 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 PRSS8Q16651 343 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 DEFB133Q30KQ1 61 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 SPATA46Q5T0L3 261 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 ZC2HC1BQ5TFG8 222 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 TREML4Q6UXN2 200 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 DEPPQ9NTK1 212 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 GPR179Q6PRD1 2367 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 LINC00271P0C7V0 271 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 PAX1P15863 534 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 NDUFV3P56181 108 aaKnown RBP4.19□□□□□ -1.74
SKP1-202ENST00000353411 RRN3P1Q2M238 152 aa4.19□□□□□ -1.74
SKP1-202ENST00000353411 TMEM78Q5T7P6 136 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms