RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 FGF11Q92914 225 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 SLC50A1Q9BRV3 221 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 PRR32B1ATL7 298 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 CXCL13O43927 109 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 FOXH1O75593 365 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 IGHG3P01860 377 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 PMS2CLQ68D20 193 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 SHISA4Q96DD7 197 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 SMIM14Q96QK8 99 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 HEXA-AS1Q9H8Q6 139 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 BAHCC1Q9P281 2608 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 IGHV3-64A0A075B6Q5 118 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 TEX43Q6ZNM6 134 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 CFHR5Q9BXR6 569 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 REG4Q9BYZ8 158 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 TCF19Q9Y242 345 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 ATP5EP56381 51 aaPredicted RBP5.2□□□□□ -1.58
VCAN-203ENST00000343200 EEF1AKMT3Q96AZ1 226 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 GFRA4Q9GZZ7 299 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 FGF16O43320 207 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 GREM1O60565 184 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 LINC00158P58513 81 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 ZXDCQ2QGD7 858 aaPredicted RBP5.2□□□□□ -1.58
VCAN-203ENST00000343200 SLC25A53Q5H9E4 307 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 CCL26Q9Y258 94 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 FAM90A9PA6NNJ1 464 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 H3BMG7 143 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 TAX1BP3O14907 124 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 REG1AP05451 166 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 EGR4Q05215 589 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 LCN12Q6JVE5 192 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 C20orf173Q96LM9 149 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 DEFB127Q9H1M4 99 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 RNF115Q9Y4L5 304 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 A0A1B0GTI1 187 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 EDIL3O43854 480 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 COX8AP10176 69 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 NPPCP23582 126 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 C1orf100Q5SVJ3 147 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 BVES-AS1Q5T3Y7 98 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 DTX2Q86UW9 622 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 WBP1LQ9NX94 342 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 PILRBQ9UKJ0 227 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 TRGV5A0A0B4J1U4 118 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 LILRA5A6NI73 299 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 IL6RP08887 468 aaPredicted RBP5.19□□□□□ -1.58
VCAN-203ENST00000343200 CELA3AP09093 270 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 REG1BP48304 166 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 FAM78AQ5JUQ0 283 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 WFDC12Q8WWY7 111 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 IGKV3D-20A0A0C4DH25 116 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 GPBAR1Q8TDU6 330 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 DUX3Q96PT4 197 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 FABP5P3A8MUU1 101 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 TCF15Q12870 199 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 NPIPB3Q92617 1050 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 TRAV17A0A0B4J275 112 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 CXCL5P42830 114 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 DEFB115Q30KQ5 88 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 A0A1W2PQD3 144 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 SIVA1O15304 175 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 LYL1P12980 280 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 LIMS2Q7Z4I7 341 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 NUP35Q8NFH5 326 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 C8orf44Q96CB5 159 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 RNF7Q9UBF6 113 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 LY96Q9Y6Y9 160 aa5.19□□□□□ -1.58
VCAN-203ENST00000343200 IGLV3-16A0A075B6K0 115 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 WNT2P09544 360 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 CCL5P13501 91 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 PRDM14Q9GZV8 571 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 LINC00527Q9UJ94 153 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 TRBV5-7A0A0A0MS05 114 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 RNF222A6NCQ9 220 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 C3orf79P0CE67 100 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 LCNL1Q6ZST4 164 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 TEX45Q8NA69 505 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 IGHV2-26A0A0B4J1V2 119 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 CRYBA4P53673 196 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 PRSS41Q7RTY9 318 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 BAALCQ8WXS3 180 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 PRO1854Q9UHT4 67 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 F6UB75 175 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 CD69Q07108 199 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 LINC01551Q86U37 167 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 TMEM256Q8N2U0 113 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 C15orf53Q8NAA6 179 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 FAM117AQ9C073 453 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 IGHV3OR15-7A0A075B7D8 119 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 VEGFBP49765 207 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 A0A1B0GX51 115 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 A0A1W2PPV9 198 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 CCL25O15444 150 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 NDUFV3P56181 108 aaKnown RBP5.18□□□□□ -1.58
VCAN-203ENST00000343200 IGHV3OR16-12A0A075B7B8 117 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 IGLC2P0DOY2 106 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 IGLC3P0DOY3 106 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 FGF6P10767 208 aa5.18□□□□□ -1.58
VCAN-203ENST00000343200 RPL34P49207 117 aaKnown RBP5.18□□□□□ -1.58
VCAN-203ENST00000343200 KLF5Q13887 457 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms