RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 TMEM200BQ69YZ2 307 aa13.36□□□□□ -0.27
SSH3-201ENST00000308127 FAM222BQ8WU58 562 aa13.36□□□□□ -0.27
SSH3-201ENST00000308127 PMCHL2Q9BQD1 86 aa13.36□□□□□ -0.27
SSH3-201ENST00000308127 CUL9Q8IWT3 2517 aa13.36□□□□□ -0.27
SSH3-201ENST00000308127 IGLV3-9A0A075B6K5 115 aa13.36□□□□□ -0.27
SSH3-201ENST00000308127 hADV38S2A0JD32 116 aa13.36□□□□□ -0.27
SSH3-201ENST00000308127 IGLL1P15814 213 aa13.36□□□□□ -0.27
SSH3-201ENST00000308127 SELENOVP59797 346 aa13.36□□□□□ -0.27
SSH3-201ENST00000308127 ARHGAP32A7KAX9 2087 aa13.35□□□□□ -0.27
SSH3-201ENST00000308127 A0A1W2PPI3 338 aa13.35□□□□□ -0.27
SSH3-201ENST00000308127 MBD6Q96DN6 1003 aa13.35□□□□□ -0.27
SSH3-201ENST00000308127 CSN3P07498 182 aa13.34□□□□□ -0.27
SSH3-201ENST00000308127 CD40P25942 277 aa13.34□□□□□ -0.27
SSH3-201ENST00000308127 TSPOP30536 169 aa13.34□□□□□ -0.27
SSH3-201ENST00000308127 URB1-AS1Q96HZ7 61 aa13.34□□□□□ -0.27
SSH3-201ENST00000308127 ALKBH7Q9BT30 221 aaPredicted RBP13.34□□□□□ -0.27
SSH3-201ENST00000308127 ZNF835Q9Y2P0 537 aa13.34□□□□□ -0.27
SSH3-201ENST00000308127 MBD3L4A6NDZ8 208 aaPredicted RBP13.34□□□□□ -0.27
SSH3-201ENST00000308127 MBD3L3A6NE82 208 aaPredicted RBP13.34□□□□□ -0.27
SSH3-201ENST00000308127 MBD3L5A6NJ08 208 aaPredicted RBP13.34□□□□□ -0.27
SSH3-201ENST00000308127 ITGB1BP1O14713 200 aa13.34□□□□□ -0.27
SSH3-201ENST00000308127 FTH1P19P0C7X4 201 aa13.34□□□□□ -0.27
SSH3-201ENST00000308127 ZNF833PQ6ZTB9 187 aa13.34□□□□□ -0.27
SSH3-201ENST00000308127 PDPNQ86YL7 162 aa13.34□□□□□ -0.27
SSH3-201ENST00000308127 MBD3L2Q8NHZ7 208 aaPredicted RBP13.34□□□□□ -0.27
SSH3-201ENST00000308127 ZNF714Q96N38 554 aa13.34□□□□□ -0.27
SSH3-201ENST00000308127 RBM14Q96PK6 669 aaKnown RBP13.34□□□□□ -0.27
SSH3-201ENST00000308127 ZFP30Q9Y2G7 519 aa13.34□□□□□ -0.27
SSH3-201ENST00000308127 ASCL3Q9NQ33 180 aa13.34□□□□□ -0.27
SSH3-201ENST00000308127 A0A1W2PRD5 423 aa13.33□□□□□ -0.28
SSH3-201ENST00000308127 A0A1W2PRF3 423 aa13.33□□□□□ -0.28
SSH3-201ENST00000308127 A0A1W2PRM7 423 aa13.33□□□□□ -0.28
SSH3-201ENST00000308127 TCRBV4S1A1TA0A5B7 111 aa13.33□□□□□ -0.28
SSH3-201ENST00000308127 hDV102S1A0JD36 115 aa13.33□□□□□ -0.28
SSH3-201ENST00000308127 GRAMD2BQ96HH9 432 aa13.33□□□□□ -0.28
SSH3-201ENST00000308127 FNDC10F2Z333 226 aa13.33□□□□□ -0.28
SSH3-201ENST00000308127 CCL25O15444 150 aa13.33□□□□□ -0.28
SSH3-201ENST00000308127 TCTAP57738 103 aa13.33□□□□□ -0.28
SSH3-201ENST00000308127 PNKDQ8N490 385 aa13.33□□□□□ -0.28
SSH3-201ENST00000308127 GTSF1Q8WW33 167 aa13.33□□□□□ -0.28
SSH3-201ENST00000308127 MRPL32Q9BYC8 188 aaKnown RBP13.33□□□□□ -0.28
SSH3-201ENST00000308127 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
SSH3-201ENST00000308127 TNFSF4P23510 183 aa13.32□□□□□ -0.28
SSH3-201ENST00000308127 TMEM177Q53S58 311 aa13.32□□□□□ -0.28
SSH3-201ENST00000308127 SSX8Q7RTT4 187 aa13.32□□□□□ -0.28
SSH3-201ENST00000308127 OSR1Q8TAX0 266 aaPredicted RBP13.32□□□□□ -0.28
SSH3-201ENST00000308127 RAB9BQ9NP90 201 aa13.32□□□□□ -0.28
SSH3-201ENST00000308127 ARL2-SNX15V9GYD0 113 aa13.32□□□□□ -0.28
SSH3-201ENST00000308127 FSTL3O95633 263 aa13.32□□□□□ -0.28
SSH3-201ENST00000308127 GATA4P43694 442 aa13.32□□□□□ -0.28
SSH3-201ENST00000308127 CIARTQ8N365 385 aaPredicted RBP13.32□□□□□ -0.28
SSH3-201ENST00000308127 EPDR1Q9UM22 224 aa13.32□□□□□ -0.28
SSH3-201ENST00000308127 LINC00312Q9Y6C7 94 aa13.32□□□□□ -0.28
SSH3-201ENST00000308127 PTTG1IPP53801 180 aa13.31□□□□□ -0.28
SSH3-201ENST00000308127 BPIFB3P59826 476 aa13.31□□□□□ -0.28
SSH3-201ENST00000308127 GAGE1Q13065 139 aa13.31□□□□□ -0.28
SSH3-201ENST00000308127 SELENOKQ9Y6D0 94 aa13.31□□□□□ -0.28
SSH3-201ENST00000308127 S4R3C0 116 aa13.31□□□□□ -0.28
SSH3-201ENST00000308127 C2orf70A6NJV1 201 aa13.31□□□□□ -0.28
SSH3-201ENST00000308127 CA7P43166 264 aa13.31□□□□□ -0.28
SSH3-201ENST00000308127 EXOC3-AS1Q8N2X6 119 aa13.31□□□□□ -0.28
SSH3-201ENST00000308127 OR5AN1Q8NGI8 311 aa13.31□□□□□ -0.28
SSH3-201ENST00000308127 AKAP6Q13023 2319 aa13.31□□□□□ -0.28
SSH3-201ENST00000308127 NBEAP1P0C6P0 100 aa13.3□□□□□ -0.28
SSH3-201ENST00000308127 IGFL2Q6UWQ7 119 aa13.3□□□□□ -0.28
SSH3-201ENST00000308127 ZADH2Q8N4Q0 377 aa13.3□□□□□ -0.28
SSH3-201ENST00000308127 OR4C13Q8NGP0 309 aa13.3□□□□□ -0.28
SSH3-201ENST00000308127 GAL3ST2Q9H3Q3 398 aa13.3□□□□□ -0.28
SSH3-201ENST00000308127 NKX6-3A6NJ46 265 aa13.3□□□□□ -0.28
SSH3-201ENST00000308127 IGLV2-23P01705 113 aa13.3□□□□□ -0.28
SSH3-201ENST00000308127 CACNG8Q8WXS5 425 aa13.3□□□□□ -0.28
SSH3-201ENST00000308127 C19orf24Q9BVV8 132 aa13.3□□□□□ -0.28
SSH3-201ENST00000308127 TPPP3Q9BW30 176 aa13.3□□□□□ -0.28
SSH3-201ENST00000308127 HIST1H1EP10412 219 aaKnown RBP13.3□□□□□ -0.28
SSH3-201ENST00000308127 OR1L4Q8NGR5 311 aa13.3□□□□□ -0.28
SSH3-201ENST00000308127 C7orf69Q9H7B7 122 aa13.3□□□□□ -0.28
SSH3-201ENST00000308127 CTSZQ9UBR2 303 aa13.3□□□□□ -0.28
SSH3-201ENST00000308127 C20orf202A1L168 122 aa13.29□□□□□ -0.28
SSH3-201ENST00000308127 LYNX1G3V0Z9 82 aa13.29□□□□□ -0.28
SSH3-201ENST00000308127 SNAI2O43623 268 aa13.29□□□□□ -0.28
SSH3-201ENST00000308127 LYNX1P0DP58 116 aa13.29□□□□□ -0.28
SSH3-201ENST00000308127 LYZP61626 148 aa13.29□□□□□ -0.28
SSH3-201ENST00000308127 RNASE8Q8TDE3 154 aaKnown RBP13.29□□□□□ -0.28
SSH3-201ENST00000308127 SPTBN1Q01082 2364 aaKnown RBP13.29□□□□□ -0.28
SSH3-201ENST00000308127 ADIPOQQ15848 244 aa13.29□□□□□ -0.28
SSH3-201ENST00000308127 TMEM167AQ8TBQ9 72 aa13.29□□□□□ -0.28
SSH3-201ENST00000308127 ZC2HC1AQ96GY0 325 aa13.29□□□□□ -0.28
SSH3-201ENST00000308127 TRAV9-2A0A087WT02 112 aa13.28□□□□□ -0.28
SSH3-201ENST00000308127 OR4C46A6NHA9 309 aa13.28□□□□□ -0.28
SSH3-201ENST00000308127 TM4SF5O14894 197 aa13.28□□□□□ -0.28
SSH3-201ENST00000308127 COX19Q49B96 90 aa13.28□□□□□ -0.28
SSH3-201ENST00000308127 KLHDC1Q8N7A1 406 aa13.28□□□□□ -0.28
SSH3-201ENST00000308127 OR8B3Q8NGG8 313 aa13.28□□□□□ -0.28
SSH3-201ENST00000308127 P01737 135 aa13.28□□□□□ -0.28
SSH3-201ENST00000308127 BSPH1Q075Z2 132 aa13.28□□□□□ -0.28
SSH3-201ENST00000308127 C1orf185Q5T7R7 199 aa13.28□□□□□ -0.28
SSH3-201ENST00000308127 PRNTQ86SH4 94 aa13.28□□□□□ -0.28
SSH3-201ENST00000308127 MRPL27Q9P0M9 148 aaKnown RBP13.28□□□□□ -0.28
SSH3-201ENST00000308127 MUC21A0A0G2JKD1 596 aa13.27□□□□□ -0.28
SSH3-201ENST00000308127 MUC21A0A140T8X8 626 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms