RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 BPIFB3P59826 476 aa20.12■□□□□ 0.81
SDCCAG3-201ENST00000298537 LYZP61626 148 aa20.12■□□□□ 0.81
SDCCAG3-201ENST00000298537 UNQ5815/PRO19632Q6UWF5 114 aa20.12■□□□□ 0.81
SDCCAG3-201ENST00000298537 HIST1H2BAQ96A08 127 aa20.12■□□□□ 0.81
SDCCAG3-201ENST00000298537 URGCP-MRPS24S4R325 110 aa20.12■□□□□ 0.81
SDCCAG3-201ENST00000298537 GGTLC3B5MD39 225 aa20.11■□□□□ 0.81
SDCCAG3-201ENST00000298537 OR2C1O95371 312 aa20.11■□□□□ 0.81
SDCCAG3-201ENST00000298537 TGFAP01135 160 aa20.11■□□□□ 0.81
SDCCAG3-201ENST00000298537 TAS2R45P59539 299 aa20.11■□□□□ 0.81
SDCCAG3-201ENST00000298537 Q5PR19 223 aa20.11■□□□□ 0.81
SDCCAG3-201ENST00000298537 BCL6BQ8N143 479 aaPredicted RBP20.11■□□□□ 0.81
SDCCAG3-201ENST00000298537 LINC01356Q8N9X3 169 aa20.11■□□□□ 0.81
SDCCAG3-201ENST00000298537 SGMS2Q8NHU3 365 aa20.11■□□□□ 0.81
SDCCAG3-201ENST00000298537 H3BUX3 64 aa20.11■□□□□ 0.81
SDCCAG3-201ENST00000298537 UBE2L3P68036 154 aaKnown RBP20.11■□□□□ 0.81
SDCCAG3-201ENST00000298537 RNF212Q495C1 297 aa20.1■□□□□ 0.81
SDCCAG3-201ENST00000298537 TMEM167BQ9NRX6 74 aa20.1■□□□□ 0.81
SDCCAG3-201ENST00000298537 CR1P17927 2039 aa20.1■□□□□ 0.81
SDCCAG3-201ENST00000298537 TRAV20A0A0B4J274 112 aa20.09■□□□□ 0.81
SDCCAG3-201ENST00000298537 YPEL4Q96NS1 127 aa20.09■□□□□ 0.81
SDCCAG3-201ENST00000298537 TEX15Q9BXT5 2789 aa20.09■□□□□ 0.81
SDCCAG3-201ENST00000298537 H3BTX0 84 aa20.09■□□□□ 0.81
SDCCAG3-201ENST00000298537 HYPMO75409 117 aa20.09■□□□□ 0.81
SDCCAG3-201ENST00000298537 CRYBA1P05813 215 aa20.09■□□□□ 0.81
SDCCAG3-201ENST00000298537 OR1L6Q8NGR2 347 aa20.09■□□□□ 0.81
SDCCAG3-201ENST00000298537 PAXXQ9BUH6 204 aa20.09■□□□□ 0.81
SDCCAG3-201ENST00000298537 PRRC2AP48634 2157 aaKnown RBP20.08■□□□□ 0.81
SDCCAG3-201ENST00000298537 J3QKU1 62 aa20.08■□□□□ 0.81
SDCCAG3-201ENST00000298537 HNF1AP20823 631 aa20.08■□□□□ 0.81
SDCCAG3-201ENST00000298537 C15orf54Q8N8G6 183 aa20.08■□□□□ 0.81
SDCCAG3-201ENST00000298537 FXYD5Q96DB9 178 aa20.08■□□□□ 0.81
SDCCAG3-201ENST00000298537 ELOA3CA0A087WX78 387 aaPredicted RBP20.08■□□□□ 0.8
SDCCAG3-201ENST00000298537 RD3LP0DJH9 198 aa20.08■□□□□ 0.8
SDCCAG3-201ENST00000298537 SUMO1P63165 101 aaKnown RBP20.08■□□□□ 0.8
SDCCAG3-201ENST00000298537 PNRC1Q12796 327 aaPredicted RBP20.08■□□□□ 0.8
SDCCAG3-201ENST00000298537 KRTAP1-3Q8IUG1 177 aa20.08■□□□□ 0.8
SDCCAG3-201ENST00000298537 RNF2Q99496 336 aa20.08■□□□□ 0.8
SDCCAG3-201ENST00000298537 OR51M1Q9H341 326 aa20.08■□□□□ 0.8
SDCCAG3-201ENST00000298537 TUBA4BQ9H853 241 aa20.08■□□□□ 0.8
SDCCAG3-201ENST00000298537 MOB4Q9Y3A3 225 aa20.08■□□□□ 0.8
SDCCAG3-201ENST00000298537 F6UZH7 168 aa20.07■□□□□ 0.8
SDCCAG3-201ENST00000298537 CRYBB3P26998 211 aa20.07■□□□□ 0.8
SDCCAG3-201ENST00000298537 FBXL7Q9UJT9 491 aa20.07■□□□□ 0.8
SDCCAG3-201ENST00000298537 A0A087WWC5 75 aa20.07■□□□□ 0.8
SDCCAG3-201ENST00000298537 C9orf152Q5JTZ5 239 aa20.07■□□□□ 0.8
SDCCAG3-201ENST00000298537 C16orf82Q7Z2V1 217 aa20.07■□□□□ 0.8
SDCCAG3-201ENST00000298537 CREBBPQ92793 2442 aa20.06■□□□□ 0.8
SDCCAG3-201ENST00000298537 OR2T8A6NH00 312 aa20.06■□□□□ 0.8
SDCCAG3-201ENST00000298537 GNG7O60262 68 aa20.06■□□□□ 0.8
SDCCAG3-201ENST00000298537 Q56UQ5 140 aa20.06■□□□□ 0.8
SDCCAG3-201ENST00000298537 Q6ZS46 218 aa20.06■□□□□ 0.8
SDCCAG3-201ENST00000298537 Q96MF0 132 aa20.06■□□□□ 0.8
SDCCAG3-201ENST00000298537 C21orf62Q9NYP8 219 aa20.06■□□□□ 0.8
SDCCAG3-201ENST00000298537 CCDC168Q8NDH2 2452 aa20.05■□□□□ 0.8
SDCCAG3-201ENST00000298537 PCP4L1A6NKN8 68 aa20.05■□□□□ 0.8
SDCCAG3-201ENST00000298537 IGHV4-31P0DP07 118 aa20.05■□□□□ 0.8
SDCCAG3-201ENST00000298537 PLP1P60201 277 aa20.05■□□□□ 0.8
SDCCAG3-201ENST00000298537 FAM110DQ8TAY7 271 aaPredicted RBP20.05■□□□□ 0.8
SDCCAG3-201ENST00000298537 MS4A10Q96PG2 267 aa20.05■□□□□ 0.8
SDCCAG3-201ENST00000298537 BEX4Q9NWD9 120 aaPredicted RBP20.05■□□□□ 0.8
SDCCAG3-201ENST00000298537 MXRA5Q9NR99 2828 aa20.05■□□□□ 0.8
SDCCAG3-201ENST00000298537 CXCL1P09341 107 aa20.05■□□□□ 0.8
SDCCAG3-201ENST00000298537 LOXL1Q08397 574 aaPredicted RBP20.05■□□□□ 0.8
SDCCAG3-201ENST00000298537 Q8WTZ3 238 aa20.05■□□□□ 0.8
SDCCAG3-201ENST00000298537 BLNKQ8WV28 456 aa20.05■□□□□ 0.8
SDCCAG3-201ENST00000298537 PSMG3-AS1Q96PY0 264 aa20.05■□□□□ 0.8
SDCCAG3-201ENST00000298537 IGHV3-35A0A0C4DH35 117 aa20.04■□□□□ 0.8
SDCCAG3-201ENST00000298537 LINC01551Q86U37 167 aa20.04■□□□□ 0.8
SDCCAG3-201ENST00000298537 ELOVL1Q9BW60 279 aa20.04■□□□□ 0.8
SDCCAG3-201ENST00000298537 MFAP4P55083 255 aa20.04■□□□□ 0.8
SDCCAG3-201ENST00000298537 ELOBQ15370 118 aa20.04■□□□□ 0.8
SDCCAG3-201ENST00000298537 ZFP82Q8N141 532 aa20.04■□□□□ 0.8
SDCCAG3-201ENST00000298537 ZNF491Q8N8L2 437 aa20.04■□□□□ 0.8
SDCCAG3-201ENST00000298537 TXNDC17Q9BRA2 123 aa20.04■□□□□ 0.8
SDCCAG3-201ENST00000298537 HIGD1AQ9Y241 93 aa20.04■□□□□ 0.8
SDCCAG3-201ENST00000298537 NDUFS6O75380 124 aaKnown RBP20.03■□□□□ 0.8
SDCCAG3-201ENST00000298537 IL4P05112 153 aa20.03■□□□□ 0.8
SDCCAG3-201ENST00000298537 BLCAPP62952 87 aa20.03■□□□□ 0.8
SDCCAG3-201ENST00000298537 CHRDL1Q9BU40 450 aa20.03■□□□□ 0.8
SDCCAG3-201ENST00000298537 SLC25A39Q9BZJ4 359 aaPredicted RBP20.03■□□□□ 0.8
SDCCAG3-201ENST00000298537 IGHV3OR16-8A0A075B7F1 116 aa20.03■□□□□ 0.8
SDCCAG3-201ENST00000298537 TGIF2-C20orf24A0A0A6YYL0 155 aa20.03■□□□□ 0.8
SDCCAG3-201ENST00000298537 A6NDX4 124 aa20.03■□□□□ 0.8
SDCCAG3-201ENST00000298537 B4DEV8 164 aa20.03■□□□□ 0.8
SDCCAG3-201ENST00000298537 RPL35P42766 123 aaKnown RBP20.03■□□□□ 0.8
SDCCAG3-201ENST00000298537 C15orf32Q32M92 178 aa20.03■□□□□ 0.8
SDCCAG3-201ENST00000298537 LINC00518Q8N0U6 118 aa20.03■□□□□ 0.8
SDCCAG3-201ENST00000298537 NECAP1Q8NC96 275 aa20.03■□□□□ 0.8
SDCCAG3-201ENST00000298537 MRPL27Q9P0M9 148 aaKnown RBP20.03■□□□□ 0.8
SDCCAG3-201ENST00000298537 GP9P14770 177 aa20.02■□□□□ 0.8
SDCCAG3-201ENST00000298537 GATA3P23771 443 aa20.02■□□□□ 0.8
SDCCAG3-201ENST00000298537 USF2Q15853 346 aaPredicted RBP20.02■□□□□ 0.8
SDCCAG3-201ENST00000298537 LINC00479Q96M42 142 aa20.02■□□□□ 0.8
SDCCAG3-201ENST00000298537 RHOGP84095 191 aa20.02■□□□□ 0.79
SDCCAG3-201ENST00000298537 DEFB112Q30KQ8 113 aa20.02■□□□□ 0.79
SDCCAG3-201ENST00000298537 C11orf52Q96A22 123 aa20.02■□□□□ 0.79
SDCCAG3-201ENST00000298537 A0A1W2PRE2 83 aa20.01■□□□□ 0.79
SDCCAG3-201ENST00000298537 TOMM40O96008 361 aa20.01■□□□□ 0.79
SDCCAG3-201ENST00000298537 RANP62826 216 aaKnown RBP20.01■□□□□ 0.79
SDCCAG3-201ENST00000298537 OCC1Q8TAD7 63 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms