RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ZNF793Q6ZN11 406 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 PAQR4Q8N4S7 273 aaPredicted RBP4.16□□□□□ -1.74
VPS13D-213ENST00000613099 ATOX1O00244 68 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 A0A1W2PQD3 144 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 H3BMM0 161 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 ANXA2RQ3ZCQ2 193 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 SPANXN1Q5VSR9 72 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 UBE2WQ96B02 151 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 PRADC1Q9BSG0 188 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 NDUFA7O95182 113 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 ASPHD2Q6ICH7 369 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 GFI1Q99684 422 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 A0A0J9YW62 118 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 UTF1Q5T230 341 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 TMEM219Q86XT9 240 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 MTORP42345 2549 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 TIMM8AO60220 97 aaPredicted RBP4.16□□□□□ -1.74
VPS13D-213ENST00000613099 C12orf74Q32Q52 190 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 TMEM52BQ4KMG9 183 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 SCNM1Q9BWG6 230 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 A0A1B0GUS0 222 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 A0A1W2PRU2 124 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 TDHQ8IZJ6 230 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 ANKRD29Q8N6D5 301 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 TRAV24A0A0B4J272 114 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 VDAC2P45880 294 aaPredicted RBP4.16□□□□□ -1.74
VPS13D-213ENST00000613099 FOXI1Q12951 378 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 COL4A1P02462 1669 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 ZNF815PA8K554 130 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 NGFP01138 241 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 UNC119Q13432 240 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 LAGE3Q14657 143 aa4.16□□□□□ -1.74
VPS13D-213ENST00000613099 SHISA7A6NL88 538 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 FAM90A9PA6NNJ1 464 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 C10orf128Q5T292 105 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 C3orf22Q8N5N4 141 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 HIGD1BQ9P298 99 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 LIPT2A6NK58 231 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 ZNF818PQ6ZRF7 136 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 M0QXV9 152 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 CEACAM5P06731 702 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 MRPL23Q16540 153 aaKnown RBP4.15□□□□□ -1.74
VPS13D-213ENST00000613099 RASL10BQ96S79 203 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 C1QTNF5Q9BXJ0 243 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 COL4A4P53420 1690 aaPredicted RBP4.15□□□□□ -1.74
VPS13D-213ENST00000613099 M0R2P5 195 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 LINC01545Q5VT33 79 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 INO80CQ6PI98 192 aaPredicted RBP4.15□□□□□ -1.74
VPS13D-213ENST00000613099 BGLAPP02818 100 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 CD38P28907 300 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 C1RLQ9NZP8 487 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 GRPP07492 148 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 TMEM171Q8WVE6 324 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 MED12LQ86YW9 2145 aa4.15□□□□□ -1.74
VPS13D-213ENST00000613099 NDUFB8O95169 186 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 EFNA4P52798 201 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 LILRA3Q8N6C8 439 aaPredicted RBP4.15□□□□□ -1.75
VPS13D-213ENST00000613099 LINC01590Q5TEZ4 76 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 VKORC1Q9BQB6 163 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 ALKBH6Q3KRA9 238 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 NMSQ5H8A3 153 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 SH2D6Q7Z4S9 175 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 MPC1Q9Y5U8 109 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 MED13Q9UHV7 2174 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 F5H768 121 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 Q6ZVH6 145 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 RPP25LQ8N5L8 163 aaKnown RBP4.15□□□□□ -1.75
VPS13D-213ENST00000613099 PGPA6NDG6 321 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 IGLL5B9A064 214 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 DGAT2L7PQ6IED9 249 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 ZPLD1Q8TCW7 415 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 C18orf15Q96N68 181 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 EGR1P18146 543 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 LHFPL1Q86WI0 220 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 ZNF683Q8IZ20 524 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 UQCRQO14949 82 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 CEACAM4O75871 244 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 CGAP01215 116 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 NPYP01303 97 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 PTGDSP41222 190 aa4.15□□□□□ -1.75
VPS13D-213ENST00000613099 KLF13Q9Y2Y9 288 aaPredicted RBP4.15□□□□□ -1.75
VPS13D-213ENST00000613099 NABP1Q96AH0 204 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 TRAV13-1A0A0B4J241 112 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 K7ESF4 209 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 KLHDC9Q8NEP7 349 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 APOOQ9BUR5 198 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 F2Z2F3 143 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 MYF5P13349 255 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 LYZP61626 148 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 ZNF488Q96MN9 340 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 A0A1W2PPV9 198 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 TMEM78Q5T7P6 136 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 C17orf99Q6UX52 265 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 MRPL55Q7Z7F7 128 aaKnown RBP4.14□□□□□ -1.75
VPS13D-213ENST00000613099 C8orf44Q96CB5 159 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 PRR14LQ5THK1 2151 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 CCDC168Q8NDH2 2452 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 MYMXA0A1B0GTQ4 84 aa4.14□□□□□ -1.75
VPS13D-213ENST00000613099 TSACCQ96A04 125 aaPredicted RBP4.14□□□□□ -1.75
VPS13D-213ENST00000613099 SELENOKQ9Y6D0 94 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms