RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 THYN1Q9P016 225 aa11.51□□□□□ -0.57
RAB40B-203ENST00000570676 PEF1Q9UBV8 284 aaKnown RBP11.51□□□□□ -0.57
RAB40B-203ENST00000570676 KLK9Q9UKQ9 250 aa11.51□□□□□ -0.57
RAB40B-203ENST00000570676 KMT2CQ8NEZ4 4911 aaKnown RBP11.51□□□□□ -0.57
RAB40B-203ENST00000570676 RNF222A6NCQ9 220 aa11.5□□□□□ -0.57
RAB40B-203ENST00000570676 FAM223BA6NKX1 122 aa11.5□□□□□ -0.57
RAB40B-203ENST00000570676 SCAF4O95104 1147 aaKnown RBP11.5□□□□□ -0.57
RAB40B-203ENST00000570676 NDUFB8O95169 186 aa11.5□□□□□ -0.57
RAB40B-203ENST00000570676 MT-CO2P00403 227 aa11.5□□□□□ -0.57
RAB40B-203ENST00000570676 AP2S1P53680 142 aaPredicted RBP11.5□□□□□ -0.57
RAB40B-203ENST00000570676 SYNJ2BPP57105 145 aa11.5□□□□□ -0.57
RAB40B-203ENST00000570676 NHLH2Q02577 135 aa11.5□□□□□ -0.57
RAB40B-203ENST00000570676 BAXQ07812 192 aa11.5□□□□□ -0.57
RAB40B-203ENST00000570676 ARL16Q0P5N6 197 aa11.5□□□□□ -0.57
RAB40B-203ENST00000570676 ACOT7LQ6ZUV0 252 aa11.5□□□□□ -0.57
RAB40B-203ENST00000570676 FAM223AQ8IWN6 122 aa11.5□□□□□ -0.57
RAB40B-203ENST00000570676 NECAP1Q8NC96 275 aa11.5□□□□□ -0.57
RAB40B-203ENST00000570676 OR9G4Q8NGQ1 327 aa11.5□□□□□ -0.57
RAB40B-203ENST00000570676 MFFQ9GZY8 342 aa11.5□□□□□ -0.57
RAB40B-203ENST00000570676 HSPB11Q9Y547 144 aa11.5□□□□□ -0.57
RAB40B-203ENST00000570676 IGHV3-21A0A0B4J1V1 117 aa11.49□□□□□ -0.57
RAB40B-203ENST00000570676 RPS10-NUDT3A0A1W2PQS6 291 aa11.49□□□□□ -0.57
RAB40B-203ENST00000570676 PRSS46E5RG02 174 aa11.49□□□□□ -0.57
RAB40B-203ENST00000570676 I3L2K1 104 aa11.49□□□□□ -0.57
RAB40B-203ENST00000570676 K7EIM0 57 aa11.49□□□□□ -0.57
RAB40B-203ENST00000570676 FRMD6-AS1P0C7T7 363 aa11.49□□□□□ -0.57
RAB40B-203ENST00000570676 EIF2B2P49770 351 aaKnown RBP11.49□□□□□ -0.57
RAB40B-203ENST00000570676 HBG1P69891 147 aa11.49□□□□□ -0.57
RAB40B-203ENST00000570676 HBG2P69892 147 aa11.49□□□□□ -0.57
RAB40B-203ENST00000570676 SLC38A11Q08AI6 406 aa11.49□□□□□ -0.57
RAB40B-203ENST00000570676 MLANAQ16655 118 aa11.49□□□□□ -0.57
RAB40B-203ENST00000570676 SBSPONQ8IVN8 264 aa11.49□□□□□ -0.57
RAB40B-203ENST00000570676 OR1S2Q8NGQ3 325 aa11.49□□□□□ -0.57
RAB40B-203ENST00000570676 BSCL2Q96G97 398 aaPredicted RBP11.49□□□□□ -0.57
RAB40B-203ENST00000570676 FNDC4Q9H6D8 234 aaPredicted RBP11.49□□□□□ -0.57
RAB40B-203ENST00000570676 BMPR1BO00238 502 aa11.48□□□□□ -0.57
RAB40B-203ENST00000570676 IGHV3-48P01763 117 aa11.48□□□□□ -0.57
RAB40B-203ENST00000570676 S100A11P31949 105 aa11.48□□□□□ -0.57
RAB40B-203ENST00000570676 GPX4P36969 197 aaPredicted RBP11.48□□□□□ -0.57
RAB40B-203ENST00000570676 ATP5G2Q06055 141 aa11.48□□□□□ -0.57
RAB40B-203ENST00000570676 OR2F1Q13607 317 aa11.48□□□□□ -0.57
RAB40B-203ENST00000570676 C15orf32Q32M92 178 aa11.48□□□□□ -0.57
RAB40B-203ENST00000570676 ETFRF1Q6IPR1 90 aa11.48□□□□□ -0.57
RAB40B-203ENST00000570676 SLC16A13Q7RTY0 426 aa11.48□□□□□ -0.57
RAB40B-203ENST00000570676 Q8N1Y9 231 aa11.48□□□□□ -0.57
RAB40B-203ENST00000570676 LILRB2Q8N423 598 aa11.48□□□□□ -0.57
RAB40B-203ENST00000570676 OR5C1Q8NGR4 320 aa11.48□□□□□ -0.57
RAB40B-203ENST00000570676 SMIM3Q9BZL3 60 aa11.48□□□□□ -0.57
RAB40B-203ENST00000570676 S4R3C0 116 aa11.48□□□□□ -0.57
RAB40B-203ENST00000570676 HUWE1Q7Z6Z7 4374 aaKnown RBP11.48□□□□□ -0.57
RAB40B-203ENST00000570676 MFSD2BA6NFX1 497 aa11.47□□□□□ -0.57
RAB40B-203ENST00000570676 BOLA2-SMG1P6H3BVE0 249 aa11.47□□□□□ -0.57
RAB40B-203ENST00000570676 CSN3P07498 182 aa11.47□□□□□ -0.57
RAB40B-203ENST00000570676 CXCL2P19875 107 aa11.47□□□□□ -0.57
RAB40B-203ENST00000570676 DLK1P80370 383 aa11.47□□□□□ -0.57
RAB40B-203ENST00000570676 ZNF345Q14585 488 aa11.47□□□□□ -0.57
RAB40B-203ENST00000570676 CLINT1Q14677 625 aa11.47□□□□□ -0.57
RAB40B-203ENST00000570676 RPEL1Q2QD12 228 aa11.47□□□□□ -0.57
RAB40B-203ENST00000570676 VN1R17PQ8TDU5 208 aa11.47□□□□□ -0.57
RAB40B-203ENST00000570676 SCARB1Q8WTV0 552 aa11.47□□□□□ -0.57
RAB40B-203ENST00000570676 CACNG8Q8WXS5 425 aa11.47□□□□□ -0.57
RAB40B-203ENST00000570676 SLC35E1Q96K37 410 aa11.47□□□□□ -0.57
RAB40B-203ENST00000570676 CXorf58Q96LI9 332 aa11.47□□□□□ -0.57
RAB40B-203ENST00000570676 GGACTQ9BVM4 153 aa11.47□□□□□ -0.57
RAB40B-203ENST00000570676 STAB2Q8WWQ8 2551 aa11.46□□□□□ -0.57
RAB40B-203ENST00000570676 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.46□□□□□ -0.57
RAB40B-203ENST00000570676 A0A0D9SG52 128 aa11.46□□□□□ -0.57
RAB40B-203ENST00000570676 SMCO3A2RU48 225 aa11.46□□□□□ -0.57
RAB40B-203ENST00000570676 IGHV3-23P01764 117 aa11.46□□□□□ -0.57
RAB40B-203ENST00000570676 HNRNPCP07910 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
RAB40B-203ENST00000570676 RND2P52198 227 aa11.46□□□□□ -0.57
RAB40B-203ENST00000570676 NKX2-5P52952 324 aaPredicted RBP11.46□□□□□ -0.57
RAB40B-203ENST00000570676 GAMTQ14353 236 aa11.46□□□□□ -0.57
RAB40B-203ENST00000570676 ATP6V1FQ16864 119 aa11.46□□□□□ -0.57
RAB40B-203ENST00000570676 KCNRGQ8N5I3 272 aa11.46□□□□□ -0.57
RAB40B-203ENST00000570676 EEF1AKMT3Q96AZ1 226 aa11.46□□□□□ -0.57
RAB40B-203ENST00000570676 ACY3Q96HD9 319 aa11.46□□□□□ -0.57
RAB40B-203ENST00000570676 TMEM147Q9BVK8 224 aa11.46□□□□□ -0.57
RAB40B-203ENST00000570676 C21orf62Q9NYP8 219 aa11.46□□□□□ -0.57
RAB40B-203ENST00000570676 SIGLEC8Q9NYZ4 499 aa11.46□□□□□ -0.57
RAB40B-203ENST00000570676 FBXL17Q9UF56 701 aa11.46□□□□□ -0.57
RAB40B-203ENST00000570676 MFAP4P55083 255 aa11.45□□□□□ -0.58
RAB40B-203ENST00000570676 AKR1C1Q04828 323 aa11.45□□□□□ -0.58
RAB40B-203ENST00000570676 LGALSLQ3ZCW2 172 aaPredicted RBP11.45□□□□□ -0.58
RAB40B-203ENST00000570676 UBAC2Q8NBM4 344 aa11.45□□□□□ -0.58
RAB40B-203ENST00000570676 ZNF502Q8TBZ5 544 aa11.45□□□□□ -0.58
RAB40B-203ENST00000570676 RCHY1Q96PM5 261 aa11.45□□□□□ -0.58
RAB40B-203ENST00000570676 UQCC1Q9NVA1 299 aa11.45□□□□□ -0.58
RAB40B-203ENST00000570676 MRPL36Q9P0J6 103 aaKnown RBP11.45□□□□□ -0.58
RAB40B-203ENST00000570676 TRBV7-1A0A0A6YYK4 115 aa11.44□□□□□ -0.58
RAB40B-203ENST00000570676 A8MZ25 164 aa11.44□□□□□ -0.58
RAB40B-203ENST00000570676 FNDC10F2Z333 226 aa11.44□□□□□ -0.58
RAB40B-203ENST00000570676 DFFBO76075 338 aa11.44□□□□□ -0.58
RAB40B-203ENST00000570676 IGHV4-30-4P0DP06 118 aa11.44□□□□□ -0.58
RAB40B-203ENST00000570676 Q56UQ5 140 aa11.44□□□□□ -0.58
RAB40B-203ENST00000570676 ADAMTSL5Q6ZMM2 481 aa11.44□□□□□ -0.58
RAB40B-203ENST00000570676 TMUB2Q71RG4 321 aa11.44□□□□□ -0.58
RAB40B-203ENST00000570676 C9orf62Q8N4C0 152 aa11.44□□□□□ -0.58
RAB40B-203ENST00000570676 OR4X1Q8NH49 305 aa11.44□□□□□ -0.58
RAB40B-203ENST00000570676 NPIPB3Q92617 1050 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms