RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 FAM90A13PP0C7W8 464 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 FAM90A14PP0C7W9 464 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 FAM90A24PP0C7X0 464 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 CD24P25063 80 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 GNG3P63215 75 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 CD300EQ496F6 205 aaPredicted RBP10.87□□□□□ -0.67
CLK3-206ENST00000562078 PDLIM3Q53GG5 364 aaPredicted RBP10.87□□□□□ -0.67
CLK3-206ENST00000562078 DRAM1Q8N682 238 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 VSTM2AQ8TAG5 236 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 MGST2Q99735 147 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 ZNF71Q9NQZ8 489 aaPredicted RBP10.87□□□□□ -0.67
CLK3-206ENST00000562078 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.87□□□□□ -0.67
CLK3-206ENST00000562078 C1RLQ9NZP8 487 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 MPC1Q9Y5U8 109 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 ISLRO14498 428 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 COX8AP10176 69 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 CAMPP49913 170 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 GUSBP1Q15486 140 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 TIGITQ495A1 244 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 Q6ZT83 130 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 TPRX1Q8N7U7 411 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 OR52E5Q8NH55 327 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 BLNKQ8WV28 456 aa10.87□□□□□ -0.67
CLK3-206ENST00000562078 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.86□□□□□ -0.67
CLK3-206ENST00000562078 K7EQM0 130 aa10.86□□□□□ -0.67
CLK3-206ENST00000562078 IGLV2-8P01709 118 aa10.86□□□□□ -0.67
CLK3-206ENST00000562078 OPRK1P41145 380 aa10.86□□□□□ -0.67
CLK3-206ENST00000562078 TREML4Q6UXN2 200 aa10.86□□□□□ -0.67
CLK3-206ENST00000562078 A0A1W2PPM0 123 aa10.86□□□□□ -0.67
CLK3-206ENST00000562078 ADH4P08319 380 aa10.86□□□□□ -0.67
CLK3-206ENST00000562078 KIR2DL2P43627 348 aaPredicted RBP10.86□□□□□ -0.67
CLK3-206ENST00000562078 FOXA3P55318 350 aaPredicted RBP10.86□□□□□ -0.67
CLK3-206ENST00000562078 OR5A1Q8NGJ0 315 aa10.86□□□□□ -0.67
CLK3-206ENST00000562078 NEU4Q8WWR8 484 aaPredicted RBP10.86□□□□□ -0.67
CLK3-206ENST00000562078 GGTLC1Q9BX51 225 aa10.86□□□□□ -0.67
CLK3-206ENST00000562078 A6NDN8 102 aa10.85□□□□□ -0.67
CLK3-206ENST00000562078 IGFBP2P18065 325 aa10.85□□□□□ -0.67
CLK3-206ENST00000562078 FOXF2Q12947 444 aa10.85□□□□□ -0.67
CLK3-206ENST00000562078 WIPF2Q8TF74 440 aaPredicted RBP10.85□□□□□ -0.67
CLK3-206ENST00000562078 MS4A6AQ9H2W1 248 aa10.85□□□□□ -0.67
CLK3-206ENST00000562078 NCOR2Q9Y618 2525 aa10.85□□□□□ -0.67
CLK3-206ENST00000562078 FAM87AP0C7U9 286 aa10.85□□□□□ -0.67
CLK3-206ENST00000562078 P0C879 139 aa10.85□□□□□ -0.67
CLK3-206ENST00000562078 RPL30P62888 115 aaKnown RBP10.85□□□□□ -0.67
CLK3-206ENST00000562078 OR2V2Q96R30 315 aa10.85□□□□□ -0.67
CLK3-206ENST00000562078 MS4A5Q9H3V2 200 aa10.85□□□□□ -0.67
CLK3-206ENST00000562078 GEMIN7Q9H840 131 aaKnown RBP10.85□□□□□ -0.67
CLK3-206ENST00000562078 ZNF355PQ9NSJ1 428 aa10.85□□□□□ -0.67
CLK3-206ENST00000562078 RABAC1Q9UI14 185 aa10.85□□□□□ -0.67
CLK3-206ENST00000562078 TIMM8BQ9Y5J9 83 aaPredicted RBP10.85□□□□□ -0.67
CLK3-206ENST00000562078 IGHV3-64DA0A0J9YX35 117 aa10.84□□□□□ -0.67
CLK3-206ENST00000562078 EFNB3Q15768 340 aa10.84□□□□□ -0.67
CLK3-206ENST00000562078 ALKBH6Q3KRA9 238 aa10.84□□□□□ -0.67
CLK3-206ENST00000562078 WDR86Q86TI4 376 aa10.84□□□□□ -0.67
CLK3-206ENST00000562078 NUP35Q8NFH5 326 aa10.84□□□□□ -0.67
CLK3-206ENST00000562078 CHD8Q9HCK8 2581 aa10.84□□□□□ -0.67
CLK3-206ENST00000562078 TRAV24A0A0B4J272 114 aa10.84□□□□□ -0.67
CLK3-206ENST00000562078 J3QT63 122 aa10.84□□□□□ -0.67
CLK3-206ENST00000562078 TCTAP57738 103 aa10.84□□□□□ -0.67
CLK3-206ENST00000562078 ACP7Q6ZNF0 438 aa10.84□□□□□ -0.67
CLK3-206ENST00000562078 RTL8AQ9BWD3 113 aa10.84□□□□□ -0.67
CLK3-206ENST00000562078 CADP27708 2225 aa10.84□□□□□ -0.67
CLK3-206ENST00000562078 BSNQ9UPA5 3926 aa10.84□□□□□ -0.67
CLK3-206ENST00000562078 A0A1W2PRE2 83 aa10.83□□□□□ -0.68
CLK3-206ENST00000562078 ZNF808Q8N4W9 903 aaPredicted RBP10.83□□□□□ -0.68
CLK3-206ENST00000562078 TMEM116Q8NCL8 245 aa10.83□□□□□ -0.68
CLK3-206ENST00000562078 LRRC29Q8WV35 223 aa10.83□□□□□ -0.68
CLK3-206ENST00000562078 H1FXQ92522 213 aaKnown RBP10.83□□□□□ -0.68
CLK3-206ENST00000562078 PKIBQ9C010 78 aa10.83□□□□□ -0.68
CLK3-206ENST00000562078 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.83□□□□□ -0.68
CLK3-206ENST00000562078 ACTL6BO94805 426 aa10.83□□□□□ -0.68
CLK3-206ENST00000562078 TCTEX1D4Q5JR98 221 aa10.83□□□□□ -0.68
CLK3-206ENST00000562078 FAM53AQ6NSI3 398 aaPredicted RBP10.83□□□□□ -0.68
CLK3-206ENST00000562078 Q6ZR03 302 aa10.83□□□□□ -0.68
CLK3-206ENST00000562078 MAP1LC3CQ9BXW4 147 aa10.83□□□□□ -0.68
CLK3-206ENST00000562078 GCM1Q9NP62 436 aa10.83□□□□□ -0.68
CLK3-206ENST00000562078 TMEM189A5PLL7 270 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 OR2J3O76001 311 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 ZNF138P52744 262 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 ADAMTSL5Q6ZMM2 481 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 LINC00596Q86U02 117 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 MBD6Q96DN6 1003 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 C19orf24Q9BVV8 132 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 ZGRF1Q86YA3 2104 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 C17orf98A8MV24 154 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 FGF6P10767 208 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 FABP2P12104 132 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 AREGP15514 252 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 MPV17P39210 176 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 BRWD1-AS2P59051 145 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 LINC00205P59089 165 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 PSG5Q15238 335 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 RASL11AQ6T310 242 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 MIR17HGQ75NE6 70 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 CXorf67Q86X51 503 aaPredicted RBP10.82□□□□□ -0.68
CLK3-206ENST00000562078 WDR31Q8NA23 367 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 TEX45Q8NA69 505 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 MRAP2Q96G30 205 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 C5orf30Q96GV9 206 aa10.82□□□□□ -0.68
CLK3-206ENST00000562078 ZNF479Q96JC4 524 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms