RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 DSCR8Q96T75 97 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 TP53TG3Q9ULZ0 132 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 FOCADQ5VW36 1801 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 TRAV8-3A0A0A6YYJ7 113 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 RPS21P63220 83 aaKnown RBP7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 ZFP36L1Q07352 338 aaKnown RBP7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 RRN3P1Q2M238 152 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 PRNDQ9UKY0 176 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 MYLKQ15746 1914 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 PRSS38A1L453 326 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 SYNJ2BPP57105 145 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 DIAPH2-AS1Q14236 149 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 DEFB133Q30KQ1 61 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 ZC2HC1BQ5TFG8 222 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 UFSP1Q6NVU6 142 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 TMEM219Q86XT9 240 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 NUP35Q8NFH5 326 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 SPRY4Q9C004 299 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 TEN1Q86WV5 123 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 APOBEC4Q8WW27 367 aaKnown RBP7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 TMEM243Q9BU79 118 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 MYO7BQ6PIF6 2116 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 F8WDY8 70 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 YPEL1O60688 119 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 DXOO77932 396 aaKnown RBP7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 YPEL2Q96QA6 119 aa7.45□□□□□ -1.22
GTF2A1-203ENST00000553612 IGKV1D-16P01601 117 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 C8orf44Q96CB5 159 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 A0A0A6YYD4 124 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 RBAKDNA6NC62 111 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 NPIPB13A6NJU9 1138 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 NPIPB4C9JG80 1138 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 COL9A1P20849 921 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 C3orf22Q8N5N4 141 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 LY75O60449 1722 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 RPL34P49207 117 aaKnown RBP7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 DLX6P56179 175 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 LINC00596Q86U02 117 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 ATG2BQ96BY7 2078 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 RREB1Q92766 1687 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 MRPL20Q9BYC9 149 aaKnown RBP7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 ESPL1Q14674 2120 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 TRGV11A0A075B6L2 103 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 MRPL33O75394 65 aaKnown RBP7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 BGLAPP02818 100 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 HLA-DRB4P13762 266 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 SNRNP40Q96DI7 357 aaKnown RBP7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 CALYQ9NYX4 217 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 AMMECR1Q9Y4X0 333 aaPredicted RBP7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 HLA-DRB4X5D2U9 266 aa7.44□□□□□ -1.22
GTF2A1-203ENST00000553612 HBDP02042 147 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 ACP1P24666 158 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 IL17DQ8TAD2 202 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 LGALS3P17931 250 aaKnown RBP7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 C1orf100Q5SVJ3 147 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 TEPPQ6URK8 271 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 GOLT1AQ6ZVE7 132 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 MIR17HGQ75NE6 70 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 PAXXQ9BUH6 204 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 A0A1B0GX51 115 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 IFI27P40305 119 aaPredicted RBP7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 ID3Q02535 119 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 NSUN5P1Q3KNT7 163 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 TMEM52Q8NDY8 209 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 OR11H6Q8NGC7 330 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 OR9G1Q8NH87 305 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 JPT2Q9H910 190 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 ATXN8Q156A1 80 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 SPACA3Q8IXA5 215 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 TM4SF19Q96DZ7 209 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 ASXL3Q9C0F0 2248 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 TOPAZ1Q8N9V7 1692 aa7.43□□□□□ -1.22
GTF2A1-203ENST00000553612 FAM90A10PA6NDY2 464 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 FAM90A8PA6NJQ4 464 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 FAM90A24PP0C7X0 464 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 MORN5Q5VZ52 161 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 UBR2Q8IWV8 1755 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 RHODO00212 210 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 RNASE2P10153 161 aaKnown RBP7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 ERHP84090 104 aaKnown RBP7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 C10orf113Q5VZT2 155 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 LILRA6Q6PI73 481 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 Q6ZQT7 251 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 OSTCQ9NRP0 149 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 SBF2Q86WG5 1849 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 IGKV3-7A0A075B6H7 116 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 CRLF1O75462 422 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 PFN2P35080 140 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 LINC01590Q5TEZ4 76 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 TRAV21A0A0B4J279 112 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 CECR9P0C854 216 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 LOXL1Q08397 574 aaPredicted RBP7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 CNEP1R1Q8N9A8 125 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 DKK2Q9UBU2 259 aa7.42□□□□□ -1.22
GTF2A1-203ENST00000553612 C4orf51C9J302 202 aa7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 CNTFRP26992 372 aa7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 A0A087WX48 190 aa7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 LTAP01374 205 aa7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 Q6ZSR6 202 aa7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 LRP5O75197 1615 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms