RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 GOLT1BQ9Y3E0 138 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 S4R3C0 116 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 LPAP08519 4548 aa0.93□□□□□ -2.26
CD44-212ENST00000524922 IGLV2-18A0A075B6J9 118 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 TRAV14DV4A0A0A6YYC5 116 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 IGHV3-72A0A0B4J1Y9 119 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 A0A0D9SG52 128 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 FAM230AA0A1W2PPH8 454 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 A0A1W2PQL4 384 aaPredicted RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 TVP23AA6NH52 213 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 METTL15A6NJ78 407 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 MCRIP1C9JLW8 97 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 H3BMM0 161 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 BOLA2-SMG1P6H3BVE0 249 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 FCN1O00602 326 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 SLC31A2O15432 143 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 NUPL2O15504 423 aaKnown RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 SSX5O60225 188 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 PDCD6O75340 191 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 OR7C1O76099 320 aaPredicted RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 YIF1AO95070 293 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 S1PR2O95136 353 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 GADD45GO95257 159 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 ORM1P02763 201 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 FABP3P05413 133 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 KRT8P05787 483 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 CD2P06729 351 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 EIF4EP06730 217 aaKnown RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 CTSDP07339 412 aaPredicted RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 CTXN2P0C2S0 81 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 ANXA8P13928 327 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 HSD17B1P14061 328 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 RAB3AP20336 220 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 SERPINA2P20848 420 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 EVI2AP22794 236 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 CRYBB3P26998 211 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 PSMB9P28065 219 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 HTR2CP28335 458 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 S100A7P31151 101 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 RRM2P31350 389 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 CASQ1P31415 396 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 RPL5P46777 297 aaKnown RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 REG1BP48304 166 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 PSMB3P49720 205 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 GNG10P50151 68 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 PPP5CP53041 499 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 MTPNP58546 118 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 TAS2R31P59538 309 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 TAS2R60P59551 318 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 RPL37AP61513 92 aaKnown RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 DAD1P61803 113 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 GNG11P61952 73 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 RPL8P62917 257 aaKnown RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 CDK5Q00535 292 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 DAZ2Q13117 558 aaKnown RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 CLINT1Q14677 625 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 P2RY14Q15391 338 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 RRN3P1Q2M238 152 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 TIGITQ495A1 244 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 C1orf194Q5T5A4 169 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 FAM162BQ5T6X4 162 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 SYT6Q5T7P8 510 aaPredicted RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 FAM222AQ5U5X8 452 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 CST9LP1Q5W188 147 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 OR8G2PQ6IF36 304 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 PLET1Q6UQ28 207 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 ATRAIDQ6UW56 229 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 SPINK6Q6UWN8 80 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 UNQ9165/PRO28630Q6UXU0 137 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 PLEKHG7Q6ZR37 379 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 SCXQ7RTU7 201 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 H2BFWTQ7Z2G1 175 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 FAM220AQ7Z4H9 259 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 IQCF2Q8IXL9 164 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 ZNF664Q8N3J9 261 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 ZNF709Q8N972 641 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 Q8N976 141 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 OR10W1Q8NGF6 305 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 OR51L1Q8NGJ5 315 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 OR4A4PQ8NGN8 299 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 OR52N1Q8NH53 320 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 OR4S2Q8NH73 311 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 GRPEL2Q8TAA5 225 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 PLPPR1Q8TBJ4 325 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 TEX47Q8TBZ9 253 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 MRPL30Q8TCC3 161 aaKnown RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 TMEM263Q8WUH6 116 aaKnown RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 TRUB1Q8WWH5 349 aaKnown RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 BORCS5Q969J3 196 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 LSM10Q969L4 123 aaKnown RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 MCUR1Q96AQ8 359 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 C16orf74Q96GX8 76 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 NARS2Q96I59 477 aaKnown RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 IGF2BP2-AS1Q96M15 143 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 ODF3Q96PU9 254 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 OR52B2Q96RD2 323 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 RNF2Q99496 336 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 TSC22D3Q99576 134 aa0.92□□□□□ -2.26
CD44-212ENST00000524922 HSD17B10Q99714 261 aaKnown RBP0.92□□□□□ -2.26
CD44-212ENST00000524922 FAM103A1Q9BTL3 118 aaKnown RBP0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms