RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 FZR1Q9UM11 496 aa7.03□□□□□ -1.28
CTNNA1-223ENST00000520520 POLR3KQ9Y2Y1 108 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-223ENST00000520520 SLC25A15Q9Y619 301 aa7.03□□□□□ -1.28
CTNNA1-223ENST00000520520 TRBV20OR9-2A0A075B6H5 130 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 M0R1B8 84 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 CRLF1O75462 422 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 C8orf88P0DMB2 117 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 DEFA4P12838 97 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 NDUFB7P17568 137 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 IER3P46695 156 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 CX3CL1P78423 397 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 STUMQ69YW2 141 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 TGIF2LXQ8IUE1 241 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 ZNF114Q8NC26 417 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 STXBP6Q8NFX7 210 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 SPATA3Q8NHX4 192 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 C22orf15Q8WYQ4 148 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 SMIM12Q96EX1 92 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 PLPPR2Q96GM1 343 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 HSPB9Q9BQS6 159 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 MIEN1Q9BRT3 115 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 DCTN5Q9BTE1 182 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 LINC00574Q9H8X3 128 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 YAE1D1Q9NRH1 226 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 NAT8BQ9UHF3 227 aa7.02□□□□□ -1.29
CTNNA1-223ENST00000520520 ANK3Q12955 4377 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 IGLV3-9A0A075B6K5 115 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 IGHV3OR15-7A0A075B7D8 119 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 PGPEP1LA6NFU8 196 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 INS-IGF2F8WCM5 200 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 EREGO14944 169 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 COX7A2P2O60397 106 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 SERF1AO75920 110 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 CGAP01215 116 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 LHBP01229 141 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 REG1AP05451 166 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 THBDP07204 575 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 SNRPCP09234 159 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 HNF1AP20823 631 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 USF1P22415 310 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 CDKN1AP38936 164 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 PPOXP50336 477 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 ZNF83P51522 516 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 UBE2L3P68036 154 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 TNFAIP6P98066 277 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 MEF2CQ06413 473 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 C17orf58Q2M2W7 97 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 CT45A1Q5HYN5 189 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 IBA57Q5T440 356 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 FAM53AQ6NSI3 398 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 ZNF705AQ6ZN79 300 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 C19orf35Q6ZS72 473 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 MIR17HGQ75NE6 70 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 LRP11Q86VZ4 500 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 VKORC1L1Q8N0U8 176 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 OR8I2Q8N0Y5 310 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 TMEM256Q8N2U0 113 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 KLHDC1Q8N7A1 406 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 ZNF439Q8NDP4 499 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 CT45A3Q8NHU0 189 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 ITLN1Q8WWA0 313 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 ZNF430Q9H8G1 570 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 SEPSECSQ9HD40 501 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 GCM1Q9NP62 436 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 ZNF331Q9NQX6 463 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 CBLN4Q9NTU7 201 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 AURKAIP1Q9NWT8 199 aaPredicted RBP7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 RPUSD1Q9UJJ7 312 aaKnown RBP7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 LINC00312Q9Y6C7 94 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 V9GYV3 84 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 HIVEP2P31629 2446 aa7.01□□□□□ -1.29
CTNNA1-223ENST00000520520 RAI1Q7Z5J4 1906 aaPredicted RBP7□□□□□ -1.29
CTNNA1-223ENST00000520520 TRAV3A0A0B4J244 114 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 C20orf202A1L168 122 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 GRIFINA4D1Z8 144 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 IZUMO1RA6ND01 250 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 K7EN84 100 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 SPRY3O43610 288 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 PROP1O75360 226 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 TFF1P04155 84 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 LINC00869P0C866 280 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 CGB3P0DN86 165 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 CGB7P0DN87 165 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 TNFRSF1AP19438 455 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 LOXP28300 417 aaPredicted RBP7□□□□□ -1.29
CTNNA1-223ENST00000520520 SUMO1P63165 101 aaKnown RBP7□□□□□ -1.29
CTNNA1-223ENST00000520520 CD69Q07108 199 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 ZNF124Q15973 351 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 SPATA31B1PQ5VZV4 182 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 CYB5R2Q6BCY4 276 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 ETFRF1Q6IPR1 90 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 SLC25A48Q6ZT89 311 aaKnown RBP7□□□□□ -1.29
CTNNA1-223ENST00000520520 FAM231DQ6ZW35 169 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 TCF23Q7RTU1 214 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 PDPNQ86YL7 162 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 WIPF2Q8TF74 440 aaPredicted RBP7□□□□□ -1.29
CTNNA1-223ENST00000520520 BORCS7Q96B45 105 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 NEU1Q99519 415 aa7□□□□□ -1.29
CTNNA1-223ENST00000520520 MRPL27Q9P0M9 148 aaKnown RBP7□□□□□ -1.29
CTNNA1-223ENST00000520520 CDC42EP3Q9UKI2 254 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms