RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 C22orf39Q6P5X5 142 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 AMTNQ6UX39 209 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 RPS27LQ71UM5 84 aaKnown RBP3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 ZNF433Q8N7K0 673 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 TPRX1Q8N7U7 411 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 OR11H6Q8NGC7 330 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 OR8B3Q8NGG8 313 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 OR10G8Q8NGN5 311 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 LMX1AQ8TE12 382 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 RNF128Q8TEB7 428 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 OR2A5Q96R48 311 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 OR8B2Q96RD0 313 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 LITAFQ99732 161 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 RPP25Q9BUL9 199 aaKnown RBP3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 TAAR3PQ9P1P4 343 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 VSIG4Q9Y279 399 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 KLHDC2Q9Y2U9 406 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 KLF12Q9Y4X4 402 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 OR1A2Q9Y585 309 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 NCKAP5O14513 1909 aa3.71□□□□□ -1.82
HMGB3P13-201ENST00000511263 CEP350Q5VT06 3117 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 TRAV18A0A075B6X5 111 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 NSG1A0A0A6YYJ2 146 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 IGHV4-61A0A0C4DH41 118 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 TRBV5-4A0A0C4DH59 114 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 MDFIC2A0A1B0GVS7 189 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 TMEM89A2RUT3 159 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 C10orf142B7Z368 130 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 UQCRQO14949 82 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 NAPSAO96009 420 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 IGHV4-59P01825 116 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 HLA-DQA1P01909 254 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 SLC25A5P05141 298 aaKnown RBP3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 OR5AL1P0C617 328 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 LINC00694P0DN24 101 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 PRDX3P30048 256 aaKnown RBP3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 SGSHP51688 502 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 TMEM258P61165 79 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 RPS4XP62701 263 aaKnown RBP3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 ZNF117Q03924 483 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 IHHQ14623 411 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 CST6Q15828 149 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 TAL2Q16559 108 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 DCAF12Q5T6F0 453 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 FAM27D1Q5T7N8 215 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 C9orf153Q5TBE3 101 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 GOLT1AQ6ZVE7 132 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 ANKRD37Q7Z713 158 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 HOGA1Q86XE5 327 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 RYBPQ8N488 228 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 C10orf126Q8N4M7 172 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 KIR2DL4Q99706 377 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 TXNDC17Q9BRA2 123 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 FAM103A1Q9BTL3 118 aaKnown RBP3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 TM2D1Q9BX74 207 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 SLC39A9Q9NUM3 307 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 GNG13Q9P2W3 67 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 TP53TG1Q9Y2A0 90 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 MPC1Q9Y5U8 109 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 ARL2-SNX15V9GYD0 113 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 ANKRD36A6QL64 1941 aa3.7□□□□□ -1.82
HMGB3P13-201ENST00000511263 IGLV3-16A0A075B6K0 115 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 A0A1B0GWB2 263 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 RIIAD1A6NNX1 92 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 J3QLW9 94 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 FCN1O00602 326 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 SH2D1BO14796 132 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 ATP6V0E1O15342 81 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 DPM2O94777 84 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 NDUFC2O95298 119 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 RENP00797 406 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 IGHV3-7P01780 117 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 MRPL3P09001 348 aaKnown RBP3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 ZNF688P0C7X2 276 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 EFNB2P52799 333 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 GNB1P62873 340 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 CEACAM16Q2WEN9 425 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 ETDBQ3ZM63 59 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 IBA57Q5T440 356 aaKnown RBP3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 GATD1Q8NB37 220 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 WFDC5Q8TCV5 224 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 CT55Q8WUE5 264 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 RNF138Q8WVD3 245 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 ARPC1AQ92747 370 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 PLEKHB2Q96CS7 222 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 NUS1Q96E22 293 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 PARP12Q9H0J9 701 aaKnown RBP3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 TP53TG3Q9ULZ0 132 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 ZNF835Q9Y2P0 537 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 TMEM131Q92545 1883 aa3.69□□□□□ -1.82
HMGB3P13-201ENST00000511263 MYLKQ15746 1914 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 IGKV3D-15A0A087WSY6 115 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 A0A0A6YYD5 115 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 IGLV9-49A0A0B4J1Y8 123 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 TEX50A0A1B0GTY4 177 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 GRIFINA4D1Z8 144 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 ZFP92A6NM28 416 aa3.68□□□□□ -1.82
HMGB3P13-201ENST00000511263 CEBPZOSA8MTT3 80 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms