RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 RPL27AP46776 148 aaKnown RBP3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 CNN1P51911 297 aaKnown RBP3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 PAX9P55771 341 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 CXCR4P61073 352 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 CYCSP99999 105 aaKnown RBP3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 PPP1R8Q12972 351 aaKnown RBP3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 RSU1Q15404 277 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 TNFAIP8L3Q5GJ75 292 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 RBM48Q5RL73 367 aaKnown RBP3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 GPR141Q7Z602 305 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 OR4D10Q8NGI6 311 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 OR51A4Q8NGJ6 313 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 OR13F1Q8NGS4 319 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 OR10J6PQ8NGY7 276 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 NEK7Q8TDX7 302 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 IGF2BP2-AS1Q96M15 143 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 LINC00479Q96M42 142 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 OPRPNQ99935 248 aaPredicted RBP3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 PLCXD1Q9NUJ7 323 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 ARMC1Q9NVT9 282 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 THYN1Q9P016 225 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 EXOGQ9Y2C4 368 aaKnown RBP3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 FAM32AQ9Y421 112 aaKnown RBP3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 TIMM8BQ9Y5J9 83 aaPredicted RBP3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 TMEM14AQ9Y6G1 99 aa3.18□□□□□ -1.9
SBDSP1-204ENST00000453858 H0Y8G0 127 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 PHOX2AO14813 284 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 RPP14O95059 124 aaKnown RBP3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 CRYZL1O95825 349 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 CST1P01037 141 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 GLAP06280 429 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 MRPL3P09001 348 aaKnown RBP3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 CEACAM6P40199 344 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 NKX2-1P43699 371 aaPredicted RBP3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 NPBWR1P48145 328 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 PSMD7P51665 324 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 GNG11P61952 73 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 PRR3P79522 188 aaKnown RBP3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 PSG9Q00887 426 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 KCTD21Q4G0X4 260 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 DDI2Q5TDH0 399 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 ZC2HC1BQ5TFG8 222 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 ZNF880Q6PDB4 577 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 AMTNQ6UX39 209 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 SSX6Q7RTT6 188 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 VKORC1L1Q8N0U8 176 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 PUSL1Q8N0Z8 303 aaKnown RBP3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 TMEM167AQ8TBQ9 72 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 TNFAIP8L1Q8WVP5 186 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 IL1F10Q8WWZ1 152 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 BAALCQ8WXS3 180 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 PRAC1Q96KF2 57 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 OR51E2Q9H255 320 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 RIMS4Q9H426 269 aaPredicted RBP3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 SAV1Q9H4B6 383 aaPredicted RBP3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 Q9HAA7 133 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 SPACA1Q9HBV2 294 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 NOP10Q9NPE3 64 aaKnown RBP3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 SDHAF2Q9NX18 166 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 OR1A1Q9P1Q5 309 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 PSORS1C2Q9UIG4 136 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 PYGO1Q9Y3Y4 419 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 PEX16Q9Y5Y5 336 aa3.17□□□□□ -1.9
SBDSP1-204ENST00000453858 A0A087X002 238 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 H7C1H1 209 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 CREBL2O60519 120 aaPredicted RBP3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 GADD45GO95257 159 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 UBCP0CG48 685 aaKnown RBP3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 RRASP10301 218 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 CALB2P22676 271 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 CRYBB3P26998 211 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 P2RY1P47900 373 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 ETV1P50549 477 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 SMIM11AP58511 58 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 ACTR3P61158 418 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 SNRPGP62308 76 aaKnown RBP3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 DHRS2Q13268 280 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 CYLC2Q14093 348 aaPredicted RBP3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 RTL8BQ17RB0 113 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 SDIM1Q6ZPB5 146 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 Q8N976 141 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 OR9Q2Q8NGE9 314 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 Q96MT0 163 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 SH3GL1Q99961 368 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 CCDC28BQ9BUN5 200 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 RPH3ALQ9UNE2 315 aa3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 SAMHD1Q9Y3Z3 626 aaKnown RBP3.16□□□□□ -1.9
SBDSP1-204ENST00000453858 IGLV7-46A0A075B6I9 117 aa3.15□□□□□ -1.91
SBDSP1-204ENST00000453858 TRAV18A0A075B6X5 111 aa3.15□□□□□ -1.91
SBDSP1-204ENST00000453858 A0A087X0K7 114 aa3.15□□□□□ -1.91
SBDSP1-204ENST00000453858 IGKV1-6A0A0C4DH72 117 aa3.15□□□□□ -1.91
SBDSP1-204ENST00000453858 A0A1B0GU03 582 aa3.15□□□□□ -1.91
SBDSP1-204ENST00000453858 LINC00854A0A1B0GVQ3 168 aa3.15□□□□□ -1.91
SBDSP1-204ENST00000453858 PRAF2O60831 178 aa3.15□□□□□ -1.91
SBDSP1-204ENST00000453858 ZNF324O75467 553 aaPredicted RBP3.15□□□□□ -1.91
SBDSP1-204ENST00000453858 KBTBD11O94819 623 aa3.15□□□□□ -1.91
SBDSP1-204ENST00000453858 EIF4EP06730 217 aaKnown RBP3.15□□□□□ -1.91
SBDSP1-204ENST00000453858 RORCP51449 518 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms