RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 KCNIP2Q9NS61 270 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 E7EUB6 86 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 CYB5BO43169 146 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 ACTL6BO94805 426 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 FAM106CPP0CH98 169 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 BCL2P10415 239 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 FGF8P55075 233 aaPredicted RBP13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 ERHP84090 104 aaKnown RBP13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 SAMD5Q5TGI4 173 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 OR10W1Q8NGF6 305 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 SLC25A22Q9H936 323 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 TPSG1Q9NRR2 321 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 GNG13Q9P2W3 67 aa13.75□□□□□ -0.21
TNFSF13-205ENST00000396545 YIF1AO95070 293 aa13.74□□□□□ -0.21
TNFSF13-205ENST00000396545 NDUFA3O95167 84 aa13.74□□□□□ -0.21
TNFSF13-205ENST00000396545 PRSS8Q16651 343 aa13.74□□□□□ -0.21
TNFSF13-205ENST00000396545 TEPPQ6URK8 271 aa13.74□□□□□ -0.21
TNFSF13-205ENST00000396545 PPP1R27Q86WC6 154 aa13.74□□□□□ -0.21
TNFSF13-205ENST00000396545 RXFP4Q8TDU9 374 aa13.74□□□□□ -0.21
TNFSF13-205ENST00000396545 RAB24Q969Q5 203 aa13.74□□□□□ -0.21
TNFSF13-205ENST00000396545 EAF1Q96JC9 268 aaPredicted RBP13.74□□□□□ -0.21
TNFSF13-205ENST00000396545 METTL1Q9UBP6 276 aaKnown RBP13.74□□□□□ -0.21
TNFSF13-205ENST00000396545 NBR2O15453 112 aa13.73□□□□□ -0.21
TNFSF13-205ENST00000396545 IFNA1P01562 189 aa13.73□□□□□ -0.21
TNFSF13-205ENST00000396545 SNRNP70P08621 437 aaKnown RBP13.73□□□□□ -0.21
TNFSF13-205ENST00000396545 OR13C7P0DN81 318 aa13.73□□□□□ -0.21
TNFSF13-205ENST00000396545 C10orf55Q5SWW7 151 aa13.73□□□□□ -0.21
TNFSF13-205ENST00000396545 FAM122CQ6P4D5 195 aa13.73□□□□□ -0.21
TNFSF13-205ENST00000396545 PXMP4Q9Y6I8 212 aa13.73□□□□□ -0.21
TNFSF13-205ENST00000396545 NDUFS6O75380 124 aaKnown RBP13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 RPL29P47914 159 aaKnown RBP13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 CDC34P49427 236 aaPredicted RBP13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 WT1-ASQ06250 92 aa13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 CD69Q07108 199 aa13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 HES1Q14469 280 aa13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 MMDQ15546 238 aa13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 FBLN7Q53RD9 439 aa13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 SOHLH1Q5JUK2 328 aa13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 TMEM144Q7Z5S9 345 aa13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 DYNAPQ8N1N2 210 aa13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 Q8N6K4 173 aa13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 CACNG8Q8WXS5 425 aa13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 P2RX4Q99571 388 aa13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 SRSF8Q9BRL6 282 aaKnown RBP13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 ZNF702PQ9H963 129 aa13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 VAX2Q9UIW0 290 aa13.72□□□□□ -0.21
TNFSF13-205ENST00000396545 ZFP92A6NM28 416 aa13.71□□□□□ -0.21
TNFSF13-205ENST00000396545 CNTFRP26992 372 aa13.71□□□□□ -0.21
TNFSF13-205ENST00000396545 GPX4P36969 197 aaPredicted RBP13.71□□□□□ -0.21
TNFSF13-205ENST00000396545 PRR20EP86478 221 aa13.71□□□□□ -0.21
TNFSF13-205ENST00000396545 PRR20CP86479 221 aa13.71□□□□□ -0.21
TNFSF13-205ENST00000396545 PRR20DP86480 221 aa13.71□□□□□ -0.21
TNFSF13-205ENST00000396545 PRR20BP86481 221 aa13.71□□□□□ -0.21
TNFSF13-205ENST00000396545 PRR20AP86496 221 aa13.71□□□□□ -0.21
TNFSF13-205ENST00000396545 MIC13Q5XKP0 118 aa13.71□□□□□ -0.21
TNFSF13-205ENST00000396545 PVRIGQ6DKI7 326 aa13.71□□□□□ -0.21
TNFSF13-205ENST00000396545 Q8N2B8 174 aa13.71□□□□□ -0.21
TNFSF13-205ENST00000396545 SERTAD4Q9NUC0 356 aa13.71□□□□□ -0.21
TNFSF13-205ENST00000396545 NUPL2O15504 423 aaKnown RBP13.71□□□□□ -0.22
TNFSF13-205ENST00000396545 TAGLN2P37802 199 aaKnown RBP13.71□□□□□ -0.22
TNFSF13-205ENST00000396545 RAB31Q13636 194 aa13.71□□□□□ -0.22
TNFSF13-205ENST00000396545 PLGLAQ15195 96 aa13.71□□□□□ -0.22
TNFSF13-205ENST00000396545 CYB561D1Q8N8Q1 229 aa13.71□□□□□ -0.22
TNFSF13-205ENST00000396545 RNASEH2CQ8TDP1 164 aaKnown RBP13.71□□□□□ -0.22
TNFSF13-205ENST00000396545 DNAH3Q8TD57 4116 aa13.7□□□□□ -0.22
TNFSF13-205ENST00000396545 IGLC7A0M8Q6 106 aa13.7□□□□□ -0.22
TNFSF13-205ENST00000396545 EIF3GO75821 320 aaKnown RBP eCLIP13.7□□□□□ -0.22
TNFSF13-205ENST00000396545 TMEM11P17152 192 aa13.7□□□□□ -0.22
TNFSF13-205ENST00000396545 RPL27AP46776 148 aaKnown RBP13.7□□□□□ -0.22
TNFSF13-205ENST00000396545 SUB1P53999 127 aaKnown RBP eCLIP13.7□□□□□ -0.22
TNFSF13-205ENST00000396545 GAMTQ14353 236 aa13.7□□□□□ -0.22
TNFSF13-205ENST00000396545 GCSAMLQ5JQS6 135 aa13.7□□□□□ -0.22
TNFSF13-205ENST00000396545 CBLN2Q8IUK8 224 aa13.7□□□□□ -0.22
TNFSF13-205ENST00000396545 ZNF114Q8NC26 417 aa13.7□□□□□ -0.22
TNFSF13-205ENST00000396545 WIPF2Q8TF74 440 aaPredicted RBP13.7□□□□□ -0.22
TNFSF13-205ENST00000396545 MANBALQ9NQG1 85 aa13.7□□□□□ -0.22
TNFSF13-205ENST00000396545 SLC45A2Q9UMX9 530 aa13.7□□□□□ -0.22
TNFSF13-205ENST00000396545 PRB2P02812 416 aaPredicted RBP13.69□□□□□ -0.22
TNFSF13-205ENST00000396545 B2MP61769 119 aa13.69□□□□□ -0.22
TNFSF13-205ENST00000396545 C5orf64Q2M2E5 130 aa13.69□□□□□ -0.22
TNFSF13-205ENST00000396545 FAM90A2PQ658T7 463 aa13.69□□□□□ -0.22
TNFSF13-205ENST00000396545 TMEM88Q6PEY1 159 aa13.69□□□□□ -0.22
TNFSF13-205ENST00000396545 FBXL15Q9H469 300 aa13.69□□□□□ -0.22
TNFSF13-205ENST00000396545 A6NDX4 124 aa13.68□□□□□ -0.22
TNFSF13-205ENST00000396545 TSPAN4O14817 238 aa13.68□□□□□ -0.22
TNFSF13-205ENST00000396545 HMGB3O15347 200 aaKnown RBP13.68□□□□□ -0.22
TNFSF13-205ENST00000396545 LINC00869P0C866 280 aa13.68□□□□□ -0.22
TNFSF13-205ENST00000396545 RHEBQ15382 184 aa13.68□□□□□ -0.22
TNFSF13-205ENST00000396545 TNXAQ16473 311 aa13.68□□□□□ -0.22
TNFSF13-205ENST00000396545 SLC16A13Q7RTY0 426 aa13.68□□□□□ -0.22
TNFSF13-205ENST00000396545 REC114Q7Z4M0 266 aa13.68□□□□□ -0.22
TNFSF13-205ENST00000396545 TMEM219Q86XT9 240 aa13.68□□□□□ -0.22
TNFSF13-205ENST00000396545 STPG3Q8N7X2 389 aa13.68□□□□□ -0.22
TNFSF13-205ENST00000396545 IGKV1OR2-108A0A075B7D4 117 aa13.67□□□□□ -0.22
TNFSF13-205ENST00000396545 A0A1W2PPV4 95 aa13.67□□□□□ -0.22
TNFSF13-205ENST00000396545 C7orf77A4D0Y5 90 aa13.67□□□□□ -0.22
TNFSF13-205ENST00000396545 CD28P10747 220 aa13.67□□□□□ -0.22
TNFSF13-205ENST00000396545 DEFA4P12838 97 aa13.67□□□□□ -0.22
TNFSF13-205ENST00000396545 PSMB3P49720 205 aa13.67□□□□□ -0.22
TNFSF13-205ENST00000396545 SSBP2P81877 361 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 227.4 ms