RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SCIMPQ6UWF3 145 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 UNQ9165/PRO28630Q6UXU0 137 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF676Q8N7Q3 588 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 PLPP5Q8NEB5 264 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 OR52E4Q8NGH9 312 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 CANT1Q8WVQ1 401 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 OTUB2Q96DC9 234 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 STACQ99469 402 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 RNASE7Q9H1E1 156 aaKnown RBP1.01□□□□□ -2.25
BRCA1-202ENST00000354071 OPN4Q9UHM6 478 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF407Q9C0G0 2248 aa1.01□□□□□ -2.25
BRCA1-202ENST00000354071 CHD5Q8TDI0 1954 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 PIGBOS1A0A0B4J2F0 54 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 E7EQ34 232 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 F5H5P2 479 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 M0R143 59 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 LYRM1O43325 122 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 DENRO43583 198 aaKnown RBP1□□□□□ -2.25
BRCA1-202ENST00000354071 NSA2O95478 260 aaKnown RBP1□□□□□ -2.25
BRCA1-202ENST00000354071 TTRP02766 147 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 MAS1P04201 325 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 OR4A8P0C604 315 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 LINC00614P0C842 121 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 TRAPPC2P0DI81 140 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 TRAPPC2BP0DI82 140 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 MGST1P10620 155 aaKnown RBP1□□□□□ -2.25
BRCA1-202ENST00000354071 IL9P15248 144 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 FGF7P21781 194 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 ELK4P28324 431 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 CD34P28906 385 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 FCER1GP30273 86 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 SNCAP37840 140 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 UBA52P62987 128 aaKnown RBP1□□□□□ -2.25
BRCA1-202ENST00000354071 TSPAN31Q12999 210 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 ADIRFQ15847 76 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 LYRM7Q5U5X0 104 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 SLC51BQ86UW2 128 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 OSR2Q8N2R0 312 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 SLC30A7Q8NEW0 376 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 OR5B17Q8NGF7 314 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 OR2D3Q8NGH3 330 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 OR10K1Q8NGX5 313 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 OR10A6Q8NH74 314 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF675Q8TD23 568 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 TMBIM1Q969X1 311 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 OR2V2Q96R30 315 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 TBL1YQ9BQ87 522 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 LXNQ9BS40 222 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 NKX6-2Q9C056 277 aaPredicted RBP1□□□□□ -2.25
BRCA1-202ENST00000354071 GABARAPL1Q9H0R8 117 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF286AQ9HBT8 521 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 ENY2Q9NPA8 101 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 MED31Q9Y3C7 131 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 V9GYS6 101 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 MGAQ8IWI9 3026 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 PIK3C2GO75747 1445 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 F8P00451 2351 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 IGKV1OR2-108A0A075B7D4 117 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 A0A0D9SG52 128 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 A0A1B0GV72 72 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 PRORSD1PA6NEY8 169 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 GGT3PA6NGU5 568 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 J3QLW9 94 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 APOC4-APOC2K7ER74 178 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 M0QZK8 103 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 M0R381 172 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 GGCTO75223 188 aaKnown RBP1□□□□□ -2.25
BRCA1-202ENST00000354071 PIAS1O75925 651 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 PDYNP01213 254 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 APOC2P02655 101 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 CD5P06127 495 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 FGF6P10767 208 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 SPI1P17947 270 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 NFYAP23511 347 aaPredicted RBP1□□□□□ -2.25
BRCA1-202ENST00000354071 KDELR1P24390 212 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 POLR2HP52434 150 aaKnown RBP1□□□□□ -2.25
BRCA1-202ENST00000354071 AKR1C2P52895 323 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 RPS20P60866 119 aaKnown RBP1□□□□□ -2.25
BRCA1-202ENST00000354071 IHHQ14623 411 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 TMEM69Q5SWH9 247 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 ALKAL2Q6UX46 152 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 HIST2H3AQ71DI3 136 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 PXT1Q8NFP0 134 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 MBD3L1Q8WWY6 194 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 TBX5Q99593 518 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 OR8D2Q9GZM6 311 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 BET1LQ9NYM9 111 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 TAS2R8Q9NYW2 309 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 NUBP2Q9Y5Y2 271 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 U3KQK5 164 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 IQGAP3Q86VI3 1631 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 NAP1L6A6NFF2 107 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 ARGFXA6NJG6 315 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 COLCA2A8K830 154 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 MED6O75586 246 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 CIAO1O76071 339 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 HBZP02008 142 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 MT-ND4LP03901 98 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 CST2P09228 141 aa1□□□□□ -2.25
BRCA1-202ENST00000354071 CTLA4P16410 223 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms