RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SLC39A9Q9NUM3 307 aa11.73□□□□□ -0.53
CXCL12-201ENST00000343575 M0R143 59 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 SLC25A17O43808 307 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 PSG5Q15238 335 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 ZNF726P1Q15940 193 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 ACTL10Q5JWF8 245 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 ZDHHC16Q969W1 377 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 IMMP2LQ96T52 175 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 ZNF705GA8MUZ8 300 aaPredicted RBP11.72□□□□□ -0.53
CXCL12-201ENST00000343575 E7EUB6 86 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 CD99P14209 185 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 ERVFC1-1P60608 527 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 ATP6V1FQ16864 119 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 PDLIM3Q53GG5 364 aaPredicted RBP11.72□□□□□ -0.53
CXCL12-201ENST00000343575 SPINK9Q5DT21 86 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 OR2T10Q8NGZ9 312 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 OR4A16Q8NH70 328 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 TMEM167AQ8TBQ9 72 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 PIFOQ8TCI5 191 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 RNF5Q99942 180 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 WDR61Q9GZS3 305 aaKnown RBP11.72□□□□□ -0.53
CXCL12-201ENST00000343575 MEGF9Q9H1U4 602 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 RBKSQ9H477 322 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 PSENENQ9NZ42 101 aa11.72□□□□□ -0.53
CXCL12-201ENST00000343575 FOXA2Q9Y261 457 aaPredicted RBP11.72□□□□□ -0.53
CXCL12-201ENST00000343575 FLNBO75369 2602 aaKnown RBP11.71□□□□□ -0.53
CXCL12-201ENST00000343575 MOSP00540 346 aa11.71□□□□□ -0.53
CXCL12-201ENST00000343575 OR52E5Q8NH55 327 aa11.71□□□□□ -0.53
CXCL12-201ENST00000343575 RSG1Q9BU20 258 aa11.71□□□□□ -0.53
CXCL12-201ENST00000343575 ZNF430Q9H8G1 570 aaPredicted RBP11.71□□□□□ -0.53
CXCL12-201ENST00000343575 CGB1A6NKQ9 187 aa11.7□□□□□ -0.54
CXCL12-201ENST00000343575 RBMXL2O75526 392 aaKnown RBP11.7□□□□□ -0.54
CXCL12-201ENST00000343575 RPL23P62829 140 aaKnown RBP11.7□□□□□ -0.54
CXCL12-201ENST00000343575 SSBP2P81877 361 aaPredicted RBP11.7□□□□□ -0.54
CXCL12-201ENST00000343575 RELQ04864 619 aaPredicted RBP11.7□□□□□ -0.54
CXCL12-201ENST00000343575 TMEM267Q0VDI3 215 aaPredicted RBP11.7□□□□□ -0.54
CXCL12-201ENST00000343575 C1orf194Q5T5A4 169 aa11.7□□□□□ -0.54
CXCL12-201ENST00000343575 BCL6BQ8N143 479 aaPredicted RBP11.7□□□□□ -0.54
CXCL12-201ENST00000343575 TEX45Q8NA69 505 aa11.7□□□□□ -0.54
CXCL12-201ENST00000343575 NPBQ8NG41 125 aa11.7□□□□□ -0.54
CXCL12-201ENST00000343575 FBXL15Q9H469 300 aa11.7□□□□□ -0.54
CXCL12-201ENST00000343575 SIGLEC9Q9Y336 463 aa11.7□□□□□ -0.54
CXCL12-201ENST00000343575 CTXND1A0A1B0GTU2 59 aa11.7□□□□□ -0.54
CXCL12-201ENST00000343575 TEX50A0A1B0GTY4 177 aa11.7□□□□□ -0.54
CXCL12-201ENST00000343575 FCN1O00602 326 aa11.7□□□□□ -0.54
CXCL12-201ENST00000343575 NDUFA3O95167 84 aa11.7□□□□□ -0.54
CXCL12-201ENST00000343575 IAPPP10997 89 aa11.7□□□□□ -0.54
CXCL12-201ENST00000343575 HSPE1P61604 102 aaKnown RBP11.7□□□□□ -0.54
CXCL12-201ENST00000343575 MRPL41Q8IXM3 137 aaKnown RBP11.7□□□□□ -0.54
CXCL12-201ENST00000343575 TAF15Q92804 592 aaKnown RBP eCLIP11.7□□□□□ -0.54
CXCL12-201ENST00000343575 TCF19Q9Y242 345 aa11.7□□□□□ -0.54
CXCL12-201ENST00000343575 OTOGQ6ZRI0 2925 aa11.69□□□□□ -0.54
CXCL12-201ENST00000343575 RRHO14718 337 aa11.69□□□□□ -0.54
CXCL12-201ENST00000343575 SOX15O60248 233 aa11.69□□□□□ -0.54
CXCL12-201ENST00000343575 VDAC2P45880 294 aaPredicted RBP11.69□□□□□ -0.54
CXCL12-201ENST00000343575 RPL8P62917 257 aaKnown RBP11.69□□□□□ -0.54
CXCL12-201ENST00000343575 VMA21Q3ZAQ7 101 aa11.69□□□□□ -0.54
CXCL12-201ENST00000343575 C10orf55Q5SWW7 151 aa11.69□□□□□ -0.54
CXCL12-201ENST00000343575 GBGT1Q8N5D6 347 aa11.69□□□□□ -0.54
CXCL12-201ENST00000343575 OR4A5Q8NH83 315 aa11.69□□□□□ -0.54
CXCL12-201ENST00000343575 VSTM2AQ8TAG5 236 aa11.69□□□□□ -0.54
CXCL12-201ENST00000343575 PRNDQ9UKY0 176 aa11.69□□□□□ -0.54
CXCL12-201ENST00000343575 KIR2DL5BA0A0G2JN68 375 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 KIR2DL5BA0A0G2JPC4 375 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 OR10J1P30954 320 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 HES1Q14469 280 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 MMDQ15546 238 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 PRSS8Q16651 343 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 KIR2DL5AQ8N109 375 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 DTD1Q8TEA8 209 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 ZNF257Q9Y2Q1 563 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 OR51B2Q9Y5P1 312 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 SONP18583 2426 aaKnown RBP11.68□□□□□ -0.54
CXCL12-201ENST00000343575 MDFIC2A0A1B0GVS7 189 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 H3BP45 60 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 NBR2O15453 112 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 CNN1P51911 297 aaKnown RBP11.68□□□□□ -0.54
CXCL12-201ENST00000343575 FGF8P55075 233 aaPredicted RBP11.68□□□□□ -0.54
CXCL12-201ENST00000343575 PPP1R27Q86WC6 154 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 C22orf15Q8WYQ4 148 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 RBM14Q96PK6 669 aaKnown RBP11.68□□□□□ -0.54
CXCL12-201ENST00000343575 NDUFA4L2Q9NRX3 87 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 FKBP11Q9NYL4 201 aa11.68□□□□□ -0.54
CXCL12-201ENST00000343575 BAHCC1Q9P281 2608 aa11.67□□□□□ -0.54
CXCL12-201ENST00000343575 SNRPCP09234 159 aaKnown RBP11.67□□□□□ -0.54
CXCL12-201ENST00000343575 BRS3P32247 399 aa11.67□□□□□ -0.54
CXCL12-201ENST00000343575 GAGE1Q13065 139 aa11.67□□□□□ -0.54
CXCL12-201ENST00000343575 OR5B3Q8NH48 314 aa11.67□□□□□ -0.54
CXCL12-201ENST00000343575 OR4C12Q96R67 309 aa11.67□□□□□ -0.54
CXCL12-201ENST00000343575 PARLQ9H300 379 aa11.67□□□□□ -0.54
CXCL12-201ENST00000343575 VSIRQ9H7M9 311 aa11.67□□□□□ -0.54
CXCL12-201ENST00000343575 FAM106CPP0CH98 169 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 TMEM11P17152 192 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 BPIFB3P59826 476 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 RANP62826 216 aaKnown RBP11.66□□□□□ -0.54
CXCL12-201ENST00000343575 PRCDQ00LT1 54 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 SLC38A11Q08AI6 406 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 SSX7Q7RTT5 188 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 HAPLN4Q86UW8 402 aa11.66□□□□□ -0.54
CXCL12-201ENST00000343575 Q8N9W7 124 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms